KEGG   Neurospora crassa: NCU04155
Entry
NCU04155          CDS       T01034                                 
Name
(RefSeq) exosome component 1
  KO
K07573  exosome complex component CSL4
Organism
ncr  Neurospora crassa
Pathway
ncr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCU04155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU04155
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     NCU04155
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     NCU04155
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 3877418
NCBI-ProteinID: XP_961311
UniProt: Q1K7K5
LinkDB
Position
V:complement(5019106..5020760)
AA seq 214 aa
MASTSSSPSMAIPGQFLGPVSKFQPGPGTHIHESNLYSSLLGVVNITQPAKAPGPAKRLN
KIINTQTTPAELPTISVLRSAGSSDKREVLPEVGNIVLCRVIRIMPRQAVVAILICGDTV
LEAEWQGLIRVQDVRATEKDRVKIYDSFRPGDIVRAEVISLGDQASYYLSTARNELGVIM
ATSEAGNTMYPVNWKEYKDPETGLSEPRKVAKPY
NT seq 645 nt   +upstreamnt  +downstreamnt
atggcgagcacatcctcttccccttcgatggccatccccggccaattcctaggccctgtc
tccaagttccaacccggtcctggaacccatatccacgagtcgaacctctactcttcgctg
ctcggcgtcgtcaacatcacacagcccgccaaggcgcctggccctgctaagcgcttgaac
aagatcatcaacacccagaccacgcccgccgagctaccgaccatctcggtattgcgttca
gcgggttcgtcagacaagcgcgaggtgcttcctgaagtgggcaacatcgtgctatgccgg
gtgattcgcatcatgccgcgccaagccgttgtggccattctaatttgcggcgatactgtt
ttggaggccgagtggcagggcctgatcagagtgcaggacgtgagagcaacagagaaggac
agggtaaagatctacgacagcttcaggcctggagatattgtcagggccgaggtgatttct
cttggtgaccaagccagctactacctgtcgacagcgcgtaacgagctcggtgtcatcatg
gcgacaagcgaggccggtaacaccatgtaccccgtcaactggaaggaatacaaggaccct
gagacggggctaagcgaacccagaaaggttgcgaagccctactga

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