Neurospora crassa: NCU04155
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Entry
NCU04155 CDS
T01034
Name
(RefSeq) exosome component 1
KO
K07573
exosome complex component CSL4
Organism
ncr
Neurospora crassa
Pathway
ncr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCU04155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU04155
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NCU04155
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NCU04155
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
3877418
NCBI-ProteinID:
XP_961311
UniProt:
Q1K7K5
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Position
V:complement(5019106..5020760)
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AA seq
214 aa
AA seq
DB search
MASTSSSPSMAIPGQFLGPVSKFQPGPGTHIHESNLYSSLLGVVNITQPAKAPGPAKRLN
KIINTQTTPAELPTISVLRSAGSSDKREVLPEVGNIVLCRVIRIMPRQAVVAILICGDTV
LEAEWQGLIRVQDVRATEKDRVKIYDSFRPGDIVRAEVISLGDQASYYLSTARNELGVIM
ATSEAGNTMYPVNWKEYKDPETGLSEPRKVAKPY
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacatcctcttccccttcgatggccatccccggccaattcctaggccctgtc
tccaagttccaacccggtcctggaacccatatccacgagtcgaacctctactcttcgctg
ctcggcgtcgtcaacatcacacagcccgccaaggcgcctggccctgctaagcgcttgaac
aagatcatcaacacccagaccacgcccgccgagctaccgaccatctcggtattgcgttca
gcgggttcgtcagacaagcgcgaggtgcttcctgaagtgggcaacatcgtgctatgccgg
gtgattcgcatcatgccgcgccaagccgttgtggccattctaatttgcggcgatactgtt
ttggaggccgagtggcagggcctgatcagagtgcaggacgtgagagcaacagagaaggac
agggtaaagatctacgacagcttcaggcctggagatattgtcagggccgaggtgatttct
cttggtgaccaagccagctactacctgtcgacagcgcgtaacgagctcggtgtcatcatg
gcgacaagcgaggccggtaacaccatgtaccccgtcaactggaaggaatacaaggaccct
gagacggggctaagcgaacccagaaaggttgcgaagccctactga
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