KEGG   Neurospora crassa: NCU04376
Entry
NCU04376          CDS       T01034                                 
Name
(RefSeq) hypothetical protein
  KO
K14299  nucleoporin SEH1
Organism
ncr  Neurospora crassa
Pathway
ncr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    NCU04376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU04376
   04131 Membrane trafficking [BR:ncr04131]
    NCU04376
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     NCU04376
Membrane trafficking [BR:ncr04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    NCU04376
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WD40_CDC20-Fz Beta-prop_EML
Other DBs
NCBI-GeneID: 23568429
NCBI-ProteinID: XP_011394090
UniProt: V5INM0
LinkDB
Position
IV:3580864..3582938
AA seq 489 aa
MSKFSQYLGDPPAIDGKSTIDSIVNHGHQDLVQAVAFNSYGDRCATGSVDGKIRVFNRHK
DGKWRVCDSWSAHGGEILELQWLPPTIYPNLLASLGIEGRFKLWAENPSAAPGRRFGVNL
TGHGGHHGGANTLSSRRDVGGGLSSLSSGDSKPTPAFDYRNPKSPIRSFSLKHNDDTRHT
YLALLSVDGTLEVLENETPENITEFSRIDQFTVCPKPSRGEETSFRVRFDPNQDVCYTAL
RAGVPTDALGLVVAAMDSVKVYRTRDTVSASLGVATAAKEFYLAAEISPKDPVAGHRGLV
RDVAWAPGNIRGYDIVATACQDGYVRVFGLSTPALQMQAQGMEGTRGWGVGEMRKHQEGR
REEGGGGGGTAAARALAGSAAQHGGGQDAHLKSGIRAGLADQSRLSGTAGDRLRLGGQQQ
PGQVRHVVTEVARLDSHRTPVWRVGFDDDGQILGSVGDEGKLMCYRQTPDGSWAKSAELA
MVKMRMAAP
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgtccaaattcagccaatacctaggcgatccgcccgccattgacggcaagtcaactata
gactccattgtgaaccatggccatcaggatctggtccaggccgttgcattcaacagctac
ggcgaccgttgcgcgactgggtccgtcgacggcaagattcgcgtcttcaatagacacaaa
gatggcaagtggcgcgtttgcgatagctggagtgcccacggcggtgagattctagagctt
caatggcttcccccaaccatctacccgaaccttctcgcctccctcggcatcgaaggacgc
ttcaagctctgggccgaaaacccctcagccgcccccggtcgtcgctttggcgtcaacctc
actgggcacggcgggcaccacggtggtgccaacaccctctcgtctcgtcgcgacgtcggc
ggtggcctctcctctctttcctcaggcgacagcaaacccacgccggcctttgactaccgc
aaccccaaatcgcccatccgctccttcagcctcaagcacaacgacgacacgcgacacacc
tacctagcccttttatctgtggacggcacgctcgaagtcctggaaaacgaaacaccagag
aacatcaccgagttctcccgcatcgaccaattcaccgtttgcccaaaaccctcccgaggt
gaggagacctccttccgggtgcgctttgaccccaaccaggatgtgtgttacaccgctttg
cgggcgggcgtgcccacggatgcgctgggactggtggtggcggctatggattcggtcaag
gtgtacaggactagagacacggtcagcgccagcttgggcgtagccacggctgcgaaggag
ttttatctcgctgcggagatcagtccgaaggatccagttgcggggcatagagggctggtg
agagacgtggcgtgggcgccggggaatatcagggggtatgatatcgtggcgacggcgtgt
caggatgggtatgtgagggtctttggactgtcgacgccggcgctgcagatgcaagcacaa
gggatggagggaaccaggggatggggagtgggggagatgaggaagcatcaggaggggagg
agagaagaaggcggtggtggtggtgggactgctgcggctagagctttggcgggctcggcg
gcgcagcatggcggtgggcaggatgcccatttgaagtcggggattagagctgggttggcg
gatcagtcgaggttgagtgggaccgcgggagataggttgaggttgggtgggcaacagcag
ccgggccaggttagacatgtggtcacggaagttgcgaggcttgatagccatcggacgccg
gtgtggagggtggggtttgatgatgacgggcagattttgggtagcgtgggtgacgagggt
aagttgatgtgctatcgacagacaccggatgggtcgtgggcaaagagcgcagagttggcg
atggtgaagatgaggatggctgcgccgtaa

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