Neurospora crassa: NCU04376
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Entry
NCU04376 CDS
T01034
Name
(RefSeq) hypothetical protein
KO
K14299
nucleoporin SEH1
Organism
ncr
Neurospora crassa
Pathway
ncr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NCU04376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU04376
04131 Membrane trafficking [BR:
ncr04131
]
NCU04376
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
NCU04376
Membrane trafficking [BR:
ncr04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
NCU04376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40_CDC20-Fz
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
23568429
NCBI-ProteinID:
XP_011394090
UniProt:
V5INM0
LinkDB
All DBs
Position
IV:3580864..3582938
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AA seq
489 aa
AA seq
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MSKFSQYLGDPPAIDGKSTIDSIVNHGHQDLVQAVAFNSYGDRCATGSVDGKIRVFNRHK
DGKWRVCDSWSAHGGEILELQWLPPTIYPNLLASLGIEGRFKLWAENPSAAPGRRFGVNL
TGHGGHHGGANTLSSRRDVGGGLSSLSSGDSKPTPAFDYRNPKSPIRSFSLKHNDDTRHT
YLALLSVDGTLEVLENETPENITEFSRIDQFTVCPKPSRGEETSFRVRFDPNQDVCYTAL
RAGVPTDALGLVVAAMDSVKVYRTRDTVSASLGVATAAKEFYLAAEISPKDPVAGHRGLV
RDVAWAPGNIRGYDIVATACQDGYVRVFGLSTPALQMQAQGMEGTRGWGVGEMRKHQEGR
REEGGGGGGTAAARALAGSAAQHGGGQDAHLKSGIRAGLADQSRLSGTAGDRLRLGGQQQ
PGQVRHVVTEVARLDSHRTPVWRVGFDDDGQILGSVGDEGKLMCYRQTPDGSWAKSAELA
MVKMRMAAP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaattcagccaatacctaggcgatccgcccgccattgacggcaagtcaactata
gactccattgtgaaccatggccatcaggatctggtccaggccgttgcattcaacagctac
ggcgaccgttgcgcgactgggtccgtcgacggcaagattcgcgtcttcaatagacacaaa
gatggcaagtggcgcgtttgcgatagctggagtgcccacggcggtgagattctagagctt
caatggcttcccccaaccatctacccgaaccttctcgcctccctcggcatcgaaggacgc
ttcaagctctgggccgaaaacccctcagccgcccccggtcgtcgctttggcgtcaacctc
actgggcacggcgggcaccacggtggtgccaacaccctctcgtctcgtcgcgacgtcggc
ggtggcctctcctctctttcctcaggcgacagcaaacccacgccggcctttgactaccgc
aaccccaaatcgcccatccgctccttcagcctcaagcacaacgacgacacgcgacacacc
tacctagcccttttatctgtggacggcacgctcgaagtcctggaaaacgaaacaccagag
aacatcaccgagttctcccgcatcgaccaattcaccgtttgcccaaaaccctcccgaggt
gaggagacctccttccgggtgcgctttgaccccaaccaggatgtgtgttacaccgctttg
cgggcgggcgtgcccacggatgcgctgggactggtggtggcggctatggattcggtcaag
gtgtacaggactagagacacggtcagcgccagcttgggcgtagccacggctgcgaaggag
ttttatctcgctgcggagatcagtccgaaggatccagttgcggggcatagagggctggtg
agagacgtggcgtgggcgccggggaatatcagggggtatgatatcgtggcgacggcgtgt
caggatgggtatgtgagggtctttggactgtcgacgccggcgctgcagatgcaagcacaa
gggatggagggaaccaggggatggggagtgggggagatgaggaagcatcaggaggggagg
agagaagaaggcggtggtggtggtgggactgctgcggctagagctttggcgggctcggcg
gcgcagcatggcggtgggcaggatgcccatttgaagtcggggattagagctgggttggcg
gatcagtcgaggttgagtgggaccgcgggagataggttgaggttgggtgggcaacagcag
ccgggccaggttagacatgtggtcacggaagttgcgaggcttgatagccatcggacgccg
gtgtggagggtggggtttgatgatgacgggcagattttgggtagcgtgggtgacgagggt
aagttgatgtgctatcgacagacaccggatgggtcgtgggcaaagagcgcagagttggcg
atggtgaagatgaggatggctgcgccgtaa
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