KEGG   Neurospora crassa: NCU04548
Entry
NCU04548          CDS       T01034                                 
Name
(RefSeq) DNA polymerase epsilon
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ncr  Neurospora crassa
Pathway
ncr03030  DNA replication
ncr03410  Base excision repair
ncr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCU04548
   03410 Base excision repair
    NCU04548
   03420 Nucleotide excision repair
    NCU04548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncr03032]
    NCU04548
   03400 DNA repair and recombination proteins [BR:ncr03400]
    NCU04548
Enzymes [BR:ncr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCU04548
DNA replication proteins [BR:ncr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    NCU04548
DNA repair and recombination proteins [BR:ncr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      NCU04548
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 zf-DPOE RNase_H_2
Other DBs
NCBI-GeneID: 3872087
NCBI-ProteinID: XP_955939
UniProt: Q7RWE3
LinkDB
Position
VII:1472762..>1480214
AA seq 2259 aa
MPNTSLRRQPQKGYRRGGKNAYHGGSKTRTFAASASARGEATSTDEKWERTALANQIDEN
MGFARYDAGKKREGWLVNVQPTSIDDPRIPGGGGRAALDCYFIEEDGSTFKATVEYEPYF
LVACRKGHEGEVEEWCKRVPGGGCVKSIRRVEKEDLKMPNHLLGYRRTFLELRFHNVQDL
MSAKRDVMPIAEKNKKGMDAMDTYAEVASANGGFDLFDDDSRNDERRHNAGFAEASDFIV
DIREYDVPYHVRVMIDLDIRVARWYHVEAKNGVTTVKVNEERLAMADPVVMAFDIETTKL
PLKFPDAAIDQIMMVSYMIDGQGFLITNREIISEDIADFDYTPKPEYQGPFMIFNEPDEK
ALLERFFLHIKEARPTVIATYNGDFFDWPFVEARASINGIDMYHEIGWKKDSEDQYKCNY
SVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVS
DAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYQKEIVLPNKHV
QPKESFWEGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDPTAVDELIRDLDAALTFSI
TVEEKKELSDIANYDEVKEQITARLMNLKETPNRLERPLIYHLDVASMYPNIMTTNRLQP
DSMISESTCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALENERFPGKYPNS
PMRSFQDLSADEQATLIRKRLQLYSQKVYHKIHDSTTIVREAIICQRENPFYINTVRDFR
DRRYDYKGKAKVWKGKTDSLKSSGASASEIDNAKKMIILFDSLQLAHKVILNSFYGYVMR
KGSRWYSMEMAGVTCLTGATIIQLARQLIERLGRPLELDTDGIWCMLPATFPENFVFKLK
NGKKMTISYPCVMLNHLVHDKFTNHQYQTLVDPKTFKYETHSDNSIFFEVDGPYKAMILP
TSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGTTLAECY
NAVAKVANRWLDVLHSKGATLADEELMELISENRSMTKTLEEYGSQKSTSITTAKRLADF
LGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEEETKRMYLKKWLKEEPADTDP
RALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDKMKQKKLT
DLFGPTTKGPLQDITHLANGTQLGDMEDFGNLLKPKTVSDAISATQKTVTAQKRKDPEPA
AAENLDPFAALPKKMPSPSEDYAAFLEYQKQKWKLQKQARARRRHLFGERRGNAQSNIQQ
TFRSQAEMTFRNTWQLLQLRASDSPGIVVAHVLIDAKIHTLKINVPRQVFLNLKSRELPD
IEVEGCHVEQVNHTLPNGHSSVHLFKLTVPEDIYFAEAEKFSLLFNHPSVEGVYEKQLPL
NMRALLQLGNLCTIDESQPGVLGKGLDQGFDLSGLKRPLKPREYLGDARMAYIYLSHISA
GERQIFGLFSTTSDQAHVIIQQRTKDGGQDLPNINKLYADMLARRNQEAAGAEWQECFPY
QEKLNIKITQVTTRRKAFLEVGDIVKKLRKEESGPTMVVIQSSQRNLLVHEIPILGEFPV
MPLRYDQGDSSLPPLGWQSVVARRLVNHYLSLGSWITHMTALARYGDVPLCNLERDDPRF
LIDIAYARRLMANNVVLWWSPSPRPDHAGYEKDDVVGPLDQVQMPSVNNPGTYASVCIDL
EVRNLAINTILTSSLINELEGADNISFNPAADATGSGDGEEFLYSENAFANAGVQVLREM
VKSWWAEACKGSTMADVMVQHLVRWVESPASCLYDRALHYYVQMMSRKALLQLMADFRRV
GSQVIFASSNRLLLQTTKSEVGNAYAYTQYILKSIKGKPLFHFIDLEIKEYWDYLVWYDE
FNYGGKATQEVLERDEQDLQMIMHWQMATFLPVRLQPIFRDWVVEFIQLMHSIKRPSFGS
DPTATPRLTQLPVNMRNGNLGEDGAVGQIILGKAFEKPLKKEIANLINTQRRELLHPELA
GDYTFPQLPGSHLSHLSMSNAKSSNTKNAAGKKVAASANPVLELVKALMQVLSLDKNITL
EARLLRKELLAMFDVREFSKDGAFQNPSESLKLAQFSCENCTMARDIDLCRDEDFMSLAA
VSDVSAAGGAAGGELEGAAPGQEKGRWKCPYCEMDYDRNEIEERLVAEVEAMVVEWTTQD
LKCGKCGALRVNEFMEHYELLCFMIDEWTGVAPAEGVNV
NT seq 6780 nt   +upstreamnt  +downstreamnt
atgcccaacacttctctaaggcgacagcctcaaaagggctaccgtcgcggtggcaagaac
gcctaccatggcggatccaaaacacgaacgttcgctgcctcggccagcgcccgcggcgag
gctacctcgacagacgaaaaatgggaaaggacagcccttgcgaaccagatcgacgagaac
atgggctttgcccgatacgatgccgggaagaagcgcgaaggctggctggtcaacgtacaa
ccgacatccatcgacgacccccgtatccccggcggcggcggtcgcgcggcactcgactgc
tacttcatcgaagaggacgggtcaacattcaaagccacagtcgaatatgagccatacttt
ctggtcgcatgtcgaaaaggtcacgaaggcgaggtcgaggagtggtgcaagagagtgcct
ggtggcggctgcgtcaagtccatccggcgggtcgagaaggaagatctcaagatgcccaac
cacttgctgggctatcgtcgaacattcttggagctgaggtttcataacgtgcaggacttg
atgtccgccaagcgcgatgtcatgcccattgcggaaaagaacaaaaagggcatggatgcc
atggatacatatgccgaagtagcatcagcgaacggcgggtttgatctttttgatgacgat
tcacgaaatgacgagcgacgacataatgctggttttgcagaggcgagcgatttcattgtt
gatatccgggaatacgacgtcccataccatgtgagagtaatgatagacttggacatacga
gttgctagatggtatcatgtcgaggccaagaatggagtcacgacagtaaaagtaaacgag
gaacgtttggccatggccgatcccgtcgtaatggctttcgatatcgagaccaccaagttg
cccctcaagtttcccgacgccgctattgaccagatcatgatggtctcatacatgatcgat
ggccagggtttcttgatcacaaatagagagattatctccgaagacattgctgatttcgac
tacacaccaaaacccgagtaccaaggtccgtttatgatcttcaacgaacctgacgaaaag
gcccttctcgaaagattcttcctgcacatcaaggaggcccgaccaaccgtcatcgccacc
tacaacggtgacttcttcgattggcctttcgtggaggctcgtgccagtatcaacggcatc
gacatgtaccacgagatcggctggaagaaggacagtgaggatcagtacaagtgcaactac
agtgtgcacatggactgctttcactgggtaaaccgtgacagttatctcccccagggtagt
agaggtctcaaagccgtcaccgttgccaagcttggatacgatcccgatgaactcgatcct
gagcttatgacaccatatgccagcgagaggccgcagacgctggccgaatactccgtctcc
gatgccgtcgcaacatactatctgtacatgaaatatgtgcatcctttcatcttctctctc
tgtaccatcttgccgctaggcccagacgatacactaagaaagggaaccggtacgctatgc
gagatgttattaatggtacaggcttaccaaaaggagattgtgttacccaataaacatgtc
cagcctaaggagtccttctgggaaggacacttgttggactccgaaacgtacgttggtggt
cacgtcgaaagtatcgaagctggcgtcttccgcgccgatattcccgtcaacttcgcggtt
gaccctaccgccgtggatgagctgattcgggatcttgatgcagccctaacgttcagtatt
acggttgaagagaagaaggagttgagtgatatcgccaactacgacgaggtcaaggagcag
ataacggccaggttgatgaacctcaaagagacgcccaatcgactggaacggccgctcatt
taccatcttgatgtcgcctccatgtaccccaacattatgacaaccaaccgattacaaccc
gattccatgatctccgagtcaacttgtgcagcatgcgacttcaaccgcccaggaaagact
tgtgacagaagactaccgtgggcctggagaggagagtacctgccagccaagcgcgacgag
tacaacatgattcgccatgcactcgagaacgagaggtttccaggaaaatacccaaacagc
ccgatgcggtcattccaagacctgagcgcagacgaacaagccactctcatccgaaagaga
ctgcagctctactcacaaaaggtgtaccacaagatccacgattccaccacgattgtcaga
gaagcgatcatttgccagcgcgagaaccccttctacatcaacacagtccgtgacttccgt
gaccgacgatacgactacaagggcaaggcgaaggtgtggaagggcaagacggattcgctc
aagagctcgggcgcatccgcgtccgaaatcgataatgccaaaaagatgattatcttgttc
gattccctgcagttggcccacaaggtcattctcaacagtttctacggatacgtcatgaga
aagggatctagatggtactcgatggaaatggccggtgtcacctgtttgacgggcgcaacc
attatccagttggcgagacagctcattgagcgactgggtcgtccactcgagctagacact
gatggtatctggtgcatgttgccggcgacattcccagagaactttgtgttcaaactcaaa
aatggcaagaaaatgaccatctcgtacccatgtgtcatgttgaaccatctggtccatgac
aagttcaccaaccaccagtaccagactctggtcgatccaaagaccttcaaatacgagacg
cacagcgacaactccatcttcttcgaagtcgacgggccgtacaaggccatgatcctaccc
acctccaaagaagaagacaagaacttgaagaagagatatgccgtcttcaatgacgatggc
agtcttgcggagctcaagggcttcgaagtgaagcgaagaggcgagttgaagctcatcaag
attttccagcagcagatcttcaagtttttcctggagggtaccaccctggcggaatgctat
aatgctgtcgccaaggtcgctaaccgctggcttgatgtactgcatagcaagggtgcaacg
cttgcggatgaagaacttatggaactgatttctgagaatcgcagcatgaccaagacgttg
gaggagtacggaagccaaaagtcaacatccatcaccacagccaagcgccttgccgacttt
ttgggcgagcaaatggtcaaagacaagggtttgaactgcaagtttatcatttgcgcccga
cccaagaatgccccggtcaccgaacgtgccgtgccggttgccatcttctctgccgaagaa
gaaacgaagaggatgtatctcaagaaatggctcaaagaggagcctgctgataccgaccct
cgagcactccttgactgggattactatctcgaacgtcttgggtccgtcatccagaagctc
atcaccatcccagccgctctgcaaaaagttcgcaacccggtaccgcgcgtgccgcatccg
gactggctgcagcggaggatcaacatcaaagacgataagatgaagcaaaagaagcttacg
gacttgtttgggcctaccaccaaaggccctctgcaagatatcacccaccttgcgaacggc
acccagcttggagatatggaggactttgggaacttgctgaagcccaagactgtcagtgat
gctatttccgccacgcaaaaaacggtgacggctcagaaacgcaaggatccggaaccagca
gcagccgagaacctggacccgtttgcggcgcttcccaagaagatgccgtcgcctagcgag
gattacgcggctttcttggagtaccagaagcaaaagtggaagctccagaagcaggcaagg
gctcgtaggcgacacttgtttggcgaaaggcgtggcaacgcgcagagcaacatccagcag
acgttccgcagtcaggctgagatgacattccgaaacacttggcagttgctgcagctgagg
gcatcagacagtccaggcattgtcgttgcccatgtgctgatcgatgccaagatccacact
ctcaagattaacgtgccccggcaagtattcttgaacttgaagagtagggaactgcccgac
attgaagttgaaggctgccatgttgaacaggtcaaccatacattgcctaatggccactct
tctgtgcatctcttcaagcttacggtgccggaggacatctactttgcggaagcagaaaag
ttctctctgttattcaaccatcccagtgtggaaggcgtgtatgagaaacagctaccgctc
aacatgcgcgcccttcttcagctgggaaatctttgcactatcgacgaaagccaacctggt
gtacttggaaagggtcttgaccaaggattcgacctgtccgggttgaagagaccactcaag
ccgagagagtacttgggcgatgcccgtatggcctacatctatctctcccacattagcgct
ggtgagcgccagatctttggtcttttctccaccaccagtgaccaagcccacgtcatcatc
cagcagaggaccaaggatggagggcaagacctgccaaacatcaacaagctctatgccgac
atgttggcaaggaggaatcaggaggccgctggagcggagtggcaagagtgtttcccgtac
caggaaaagctgaatatcaagatcacccaagttaccacccgccggaaagctttccttgag
gttggcgacattgtcaagaaactgagaaaggaagagtccggaccgaccatggtggtcatc
caatcctcacagcgcaatctattggttcatgagattcccatcttgggggaattccctgtg
atgccattgcgatatgatcaaggggacagctcactgcccccactaggctggcaaagtgtg
gtggcccgtcggttggtcaatcactacctcagcctgggttcctggatcacccatatgacg
gctcttgctcggtacggcgacgtaccgctatgcaacctggagcgagacgatccccgtttc
ctgatcgatatcgcatatgctcgccggctcatggccaacaatgtcgtgctctggtggtca
ccgagtccgcgccccgaccacgctggttatgagaaggacgatgtggttggcccactcgat
caggttcagatgccgtccgtcaacaatcccggcacttatgcttcggtgtgtatagacctt
gaggtgcggaacttggctatcaacaccattctcacatcttcgctcatcaatgagctggaa
ggtgcggataacatatctttcaatcccgccgccgatgcaaccggtagtggagacggcgaa
gaatttctttattcggagaacgcttttgccaatgctggcgtgcaggtgctccgtgagatg
gtcaaatcatggtgggcggaagcttgcaaggggtccacgatggccgacgtgatggttcag
cacttggtccgttgggtcgaatcgccagcctcgtgcctgtacgatcgtgctctgcattac
tatgtccagatgatgagccgcaaggcgctcctccagctcatggccgatttccgtcgcgta
ggatcgcaggtcatctttgccagctccaacagacttctcctccagaccaccaagtccgag
gttggaaatgcgtatgcatatacccagtacattctcaagagcatcaagggcaaaccactc
tttcactttatcgacctcgaaatcaaggagtactgggactacctggtatggtatgacgag
ttcaactacggcggcaaggcgacacaagaggtgctcgagcgggacgaacaggacctgcag
atgattatgcactggcaaatggcaacctttctccctgtccgtctgcagcccatcttccgc
gactgggtcgtcgagtttatccagctgatgcacagcatcaagcgaccctcctttggcagc
gacccaacagccacgccacgtctcacccaactgcccgtcaacatgcgcaatggcaatctc
ggcgaggacggcgccgtcgggcaaatcatcctgggcaaagcgttcgagaagcctctcaag
aaggaaatcgccaacctcatcaacacgcaaaggcgcgagctcctgcacccggagctggca
ggcgattacacatttccccaactaccgggatctcacctgtctcacctgtctatgtccaat
gccaagtcgagtaataccaagaacgcggcaggaaagaaagtagcagcgtcggccaatccg
gtgcttgagctggtcaaggccctgatgcaggttttatctttggacaagaacatcacgctc
gaagcgcggctgctgcgcaaggaactcctcgccatgttcgacgtacgcgagttcagcaag
gacggcgcgttccaaaacccatcggaaagtctgaaactggcccagttcagctgcgaaaac
tgtaccatggctagggacattgatctctgtcgagacgaggactttatgagtttggcggcc
gtttctgacgtgtcagcagcaggcggagcggccggcggcgagttggaaggagctgctcca
ggacaagaaaagggaaggtggaaatgcccttactgcgaaatggactacgacaggaacgag
attgaggagaggctggtggcggaggtggaggccatggtggtggagtggacgacgcaggac
ctcaagtgcggcaagtgcggggcgctgagggtgaatgagttcatggagcattacgagctg
ctgtgcttcatgatcgatgagtggactggtgtggcgccggccgagggtgtaaatgtgtaa

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