Neurospora crassa: NCU04766
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Entry
NCU04766 CDS
T01034
Name
(RefSeq) Ccr4-Not transcription complex subunit
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ncr
Neurospora crassa
Pathway
ncr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCU04766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU04766
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCU04766
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NCU04766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
DUF2624
Motif
Other DBs
NCBI-GeneID:
3876446
NCBI-ProteinID:
XP_960299
UniProt:
Q7S687
LinkDB
All DBs
Position
VI:complement(733063..741591)
Genome browser
AA seq
2098 aa
AA seq
DB search
MEGFRSYFQRLVVGNAGQIFPNQKWQGVNSTTYHQLVAEVKKLSQDFEQSRRIAEAIETG
TEDLFRDFDLSTFMEHFKLDAFEKTVLALAFKLGSKPDLKTKADAILSTNFPMFGNILSK
SSGTHTMLGPDFIAGLLDRFIQVHPPNFNAAAKKELEHNVQSRYIQGNPDSNPLPPSQVL
SALDLMRLLADRPPNALTLYIHKTGQDFTENEETCYNYLRNRPANCQLSEEQVSHALMYT
TISQTPPHNPSVLVTALRRVLPGTFRWQDVVSYFDHSGARITAPQFLRLYNALLPIAQDD
SQGFDIQRLWGGEWENPETQMSFVCAYTSLLPEQLDATTIPGLKPTFTLDDYAQAPQMIR
ETAAYAVRHPLVSEAAMSAIFNVALHSTHASKCTEAKRLFQDVVVPQVAIFVVSAFRVPK
PWPKLAEDALVDLFIESLWAAKSPETDFVMNSLWRWDKDWVKMRLIDAHAHRPICLPQIF
EHSIRQGWLEELVYLINGFGFDLTALAHAEGYLDLQEWAQKNAERSTEMASALLQFLMIK
ANLELQYQRSGPGAPKQSTTLQVRTVSAMLQILEEFLPKSPIPELIVVQRQCITAYPRLI
NYGEGFDDIIDANGRDGNSLPQAANVRMEEHYKKMYSDEVAVRTIVEVLDQYKHSRDPLE
QDTFACMIHGLFDEYAHYENYPLEALATTAVLFGGIISHKLVSELPLKIGLGMILEAVRD
HQPQEPMYKFGLQALLQLLPRLREWPGFCTQLLLIPGLQNTEARKKAEDVLREHEEETMR
ARGGALPLGATMGNDNMTNGNLDEAHGSEQHPPPFASVNVDPPPPGVIYEDPTAEAQGKI
QFFLNNLTETTLQTMYKDLRDMLETKHQQWFASHLVEERAKMQPNYHQVYLDLVKMFEDK
SLWAEVLRETYVSVQRMLNSDVTLQNSTERTHLKNLGGWLGLLTLARNKPIKHRNIAFKQ
LLMEAHDTKRLLIVIPFVCKVLAQGASSEVFQPPNPWLMDIIHLLIELYHNAELKLNLKF
EIEVLCKGLKLDHKSIEPSGEILNRVPVEEVPDLNGQELEPYDNTSINGMGSVAGGLPAH
ASLPIPDLSASLSIPPTEVIDQAKLHSITSQAVTRALQEIIQPVVDRSVTIAAIATQQMI
HKDFATEPDENRVRDAAINMVKSTAGSLALVTSKEPLRSNMANYLRALSAEIGLVLPEGI
IMLCINSNLDLASSVIEKSAEDRAVPEIEEMIQPEIEARRRHRAQRPNEPYMDPGLTRWA
WTIPHPFKLNPSMTGLNAEQMAIYDDFARQPRAVASTTGPSHAASTSDARSLANEVLGDQ
FNTISALPTPAETPSLPHLGGQLQHYPQGSGGLANGRQAGLNQVDARTIADRVNKLLESL
TAAATGATEEHFNELPRAHQVLDIIDALVQLIIKTQQTSEEFAAYAATQIAQLIFRQPGD
TLLLESLVHVLETLRKIAGPATSQQIRSLFHQQPAEYFLNLSLIAALLGTDLLDWRSIDA
AMSMALQQRKEGSVEFLEQLVDLTLLSESPLALYADFVRSLEEAWAWISENPDVPGGQSL
KSKILAPPPDLPEGLTPAEILAIRQDQMEYVFDEWVHLCNNPAASSSKSSTIFVQQMRSR
GVIASTDDFLMFARLAIDKSVDRFEHVVHLNGTITEAYQAIDALGKMILIFFQSHEDNAD
GQTARAAFIDSILALGVLVLNSHHVKRGDAFNSRVFVRFFSYLLHGIHSLEELPENERDR
FMLSFAERLYDLRPSLYPGFVLGWLTLVTHRVFQPAMLQMANNAGWEAYTKILRDLLSYQ
GELLKPLELSIFAKEMYQAVLKLLIILGHDFPDYVSANHVLLCQSLPPHATQLRNMILLA
TPASAAKPTDAFQPGLKLDQIADIKEAAISVYDPAEQLRQLGLLDILDQALQNGPSEDAI
AQITHAITRTGSGTTDYGFVPIDVNRQVIDAVITHIGNFAVNRAATRNDASVFVPGAPDL
KTLQMLITELSPDTRYFVLNSMANWLRFTSAHTHYFIQVFLDFFGHDVASTDPEEMDIRQ
QIVRILLERLIGYWPYPWGLIITTMELVKNEKYNFFELPFIKATPEVRRVFEDKVRQH
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtttcggtcttactttcagcggttagtggtcggcaatgccggccaaatcttt
ccgaaccaaaaatggcagggcgtcaactcgaccacctaccaccagctcgtcgcagaggtg
aagaagctatcacaagactttgagcagtccaggagaattgccgaggcgattgagacaggc
acagaagacctcttccgcgactttgatctttccaccttcatggaacatttcaagctcgat
gcttttgaaaagactgttctagcgcttgccttcaagcttgggagcaagcccgatctcaag
accaaggccgatgccatcttatcaacaaacttccccatgtttggcaacattctcagcaaa
tcgtccggcacacacacgatgcttggacccgattttatcgctgggttgctcgatcgcttc
attcaagtccacccgcccaatttcaacgcggcagcaaagaaggagttggagcataatgtg
cagtctcgatacatccaaggaaatcccgattcgaacccgctgcctccctctcaagtgctg
tccgcacttgatctaatgcgactactggcagaccgacccccgaatgccttgactctctac
atccacaagaccgggcaagacttcaccgagaatgaagagacttgctataactacctccgg
aatcgtccggccaactgccagttgagtgaggagcaggtatcccacgcgctcatgtatacg
accatcagccaaacccctccgcataacccttcggttcttgtcacggctctcaggcgtgtt
ctgccaggtaccttcagatggcaggatgtggtctcgtactttgatcacagcggtgcccga
atcactgcgccccagtttcttcgtctctacaatgctctgctgccgatagcgcaagacgac
agccagggttttgatattcagcggctatggggtggcgagtgggaaaacccagagactcaa
atgtcctttgtctgcgcatacacctcactgctgcctgaacagctggacgccaccaccatc
ccgggcctgaagccgaccttcaccttggacgactatgcacaagcaccccagatgatccgg
gaaacggccgcatatgcagtcaggcatcccttggtatccgaagcggccatgtctgccatc
ttcaacgtcgccctccactctacacacgcctccaagtgtaccgaagccaagcgtcttttc
caggatgtcgtcgttccccaagtggccatctttgtggtctcggccttcagggtgcccaag
ccttggcccaagctagctgaggacgctctggttgacttgttcatcgagtcgttatgggca
gccaaatcacccgagaccgatttcgtgatgaatagcctgtggaggtgggacaaagactgg
gtcaaaatgaggttgatagatgcccacgcgcacaggccgatatgcctgccacaaatattc
gagcattccatacggcaaggctggctcgaggagcttgtctatctaatcaatggctttggg
ttcgatctcactgctctagcccacgccgagggctacctcgacctgcaggagtgggcacag
aagaacgcagaacggagtaccgagatggcctcggcccttcttcagttcctgatgatcaag
gcgaatctcgaactgcagtatcagcgttctgggcccggtgcccctaagcagagcaccacc
ctgcaggttcggacagtgtctgccatgcttcagatcctggaggagtttctgcccaagtcg
ccgatcccggagcttattgtggtccaaaggcaatgtatcaccgcgtacccgaggcttatc
aattacggcgaagggttcgatgacattattgacgccaatggtcgtgatgggaattcctta
ccccaggctgctaatgttagaatggaggagcactacaagaaaatgtacagcgacgaagtc
gcggtacgaaccatcgttgaggttctcgaccagtacaagcactcgcgagatcctctcgaa
caagacacctttgcttgcatgattcacggcctgttcgatgaatacgcgcattatgagaat
tatcctctggaggcgctcgccaccacggctgtgctcttcggcggcatcatctctcacaag
ctcgtttcggagttgcccctcaagatcggacttggcatgatcctcgaggctgtccgggac
catcaaccccaggagcccatgtacaagtttggcttgcaagctcttcttcaactcctacct
cgcttacgcgaatggccagggttttgcacgcagctattgctcatcccgggtcttcagaat
accgaggcccgcaagaaggccgaagatgttcttcgtgagcacgaggaggagacgatgcgc
gcccgcggaggcgccttaccgcttggcgcgaccatgggtaacgacaacatgacaaacggt
aaccttgacgaggctcacggttcggagcagcacccgccgccattcgcgtcggtcaacgtt
gatccgcctccaccgggggtgatttatgaggacccaaccgccgaggcccagggcaagatt
cagttcttcctcaacaaccttactgaaactacactgcagaccatgtacaaggaccttcgc
gacatgttggagaccaagcatcagcagtggttcgctagccacctggttgaagaacgtgcc
aagatgcagccgaactaccatcaagtttaccttgacctggtaaagatgtttgaggataag
tcactgtgggccgaggttttgagggagacctatgtcagcgtccagagaatgctcaattcc
gacgttacgctacagaactcaactgagaggacgcacttgaagaatttgggcggctggctc
ggtcttttgacgctcgcgagaaacaagcccattaagcatagaaatatcgctttcaaacag
ttgcttatggaagcgcatgatactaagcgtctcctgattgttatacctttcgtctgcaag
gtcctcgctcaaggagcttcatcagaggtcttccagccacccaatccctggctgatggac
attatccatctcctgatcgagctgtaccacaacgccgagctgaagctgaacttgaagttc
gagattgaggtcttgtgcaagggcctcaagctggaccacaagagcattgagccgtctggc
gagattctcaaccgggttcctgtcgaggaagttcctgatctgaatgggcaagagcttgag
ccctacgacaacacctctattaacggtatgggtagtgtcgcgggtggcctccccgctcat
gcctctcttccgatccccgacctttccgccagcctctcgatcccgccaaccgaagtcatt
gatcaagccaaactgcacagcattacctctcaagcagttacgcgagccctgcaggagatc
atccagccagtggttgacaggtccgtgaccattgcggcgatagccacacagcaaatgatc
cacaaggactttgccaccgagcctgatgagaaccgggtgcgggacgcggcgatcaacatg
gtcaagtcaactgcgggcagtcttgccctggtcacgtccaaggaaccccttcgctccaac
atggccaactaccttcgtgctctctcggctgagatcggtctagtgctgcctgagggtatc
atcatgctctgcatcaactcgaatttggatctcgcttctagcgtaatcgagaagtcggct
gaagaccgtgcggttccggagatcgaggagatgattcaacctgaaattgaagccagacgc
cggcatcgtgcgcagcgtccgaatgagccatacatggatcctggactcactcgctgggcc
tggaccattcctcatcccttcaagttgaacccaagcatgactggtcttaacgcggagcaa
atggctatttacgatgactttgcccgacagccgagggcagtcgcttcgacgacaggaccg
tcccacgcagcctccacatcggatgccaggtctctcgcaaatgaagtcctcggagatcag
ttcaacaccatttcggcccttcccacacctgcggagacaccttcgcttcctcacctcggt
ggtcagcttcagcactacccccagggaagtggcggattggcaaacggacgtcaagccggg
cttaaccaggtggatgccaggaccattgctgacagagtcaacaagcttttggagtcactg
accgcggccgccactggtgccaccgaggaacacttcaatgaactgccccgcgctcaccaa
gtcctggacatcattgacgctcttgtgcaactcattatcaagactcagcagacgtctgaa
gagtttgcagcatatgccgcaacccagatcgcccagttgatcttcagacagccaggcgat
accctcttgcttgaaagtctcgtccatgtcctcgaaaccctccgtaagattgccggtccg
gccacgagccagcagatcaggagtctcttccatcaacaaccagcggaatacttcctcaac
ctttcgctcattgcagcactgctcggcacggacctgctcgactggagaagcattgatgca
gccatgtctatggccctccagcaacgcaaagagggatccgtcgagttcctcgagcagctt
gtggatcttacgctgctgagtgagagccctcttgcgctctatgctgactttgtccgcagt
ttggaggaagcatgggcctggatcagtgagaatccggatgttccaggaggccagagtctc
aagtccaagatccttgcccctcctccggacttgcctgaaggcctcactccggcagagatc
ctcgccatccgccaggaccagatggagtatgtctttgacgaatgggttcacctttgcaac
aaccctgccgcctcctcctccaagtcatcgacgatctttgtacagcagatgcgctccaga
ggagtcattgctagcactgatgatttcctcatgtttgcacgcctagccattgacaagtct
gtggaccgcttcgagcatgttgttcaccttaatggaacgataacggaggcgtaccaggcg
attgatgctttaggcaaaatgatcctcatcttcttccagtcccacgaagataatgccgac
ggacaaacggctcgtgctgccttcattgattccatcctcgcccttggggtgctggtattg
aatagccaccacgtcaagcgtggcgacgctttcaactcacgggtgtttgttcggttcttc
tcctacctccttcacggcattcactctctggaggagcttccagaaaatgagcgtgatcgc
ttcatgcttagctttgccgagcgtctttacgacctgcggccgagcctctacccaggcttc
gtccttggctggctcacacttgtcacccaccgtgtcttccagccagccatgcttcaaatg
gctaacaacgcgggctgggaggcgtacaccaagatccttcgggatttgctctcttaccag
ggcgagctgctgaagccgctcgagctctcgatcttcgccaaggaaatgtaccaggccgtc
ctaaagctcctcatcatcctggggcatgatttccccgattacgtgtctgccaaccatgtg
ctgctgtgccagagcttgccgcctcacgcaacgcaattaaggaacatgatcttactggct
actcctgcttcggccgcgaagccgaccgatgccttccagcccggcttgaaattggatcag
atcgcagatatcaaagaagcagcgatcagtgtctacgatcctgccgagcagctacgccaa
ctggggctgcttgacattctggatcaggctttgcagaacggcccgtccgaagatgccatt
gcgcagattacacacgctatcactaggactggtagcggaacgacggactatggctttgtt
cccattgacgtcaaccgtcaagtcatcgacgccgtaatcacgcatattggcaactttgcc
gtcaaccgcgccgccaccaggaacgacgcctctgtgttcgtccccggcgcaccagacctc
aagacactgcaaatgctcatcacggaactctcccccgatacgaggtacttcgttctgaac
agcatggcgaactggctccgcttcaccagcgcccacacgcactatttcattcaagtcttc
cttgacttctttggccacgacgtcgcctccacggatcccgaggagatggacattcggcag
cagattgttcggatcctccttgaacggttaataggctactggccgtacccgtggggtctg
atcatcaccaccatggagctagtcaagaacgagaagtacaacttctttgagctgcctttc
atcaaggccacccctgaggtgcggagagtgtttgaggataaggttcgccagcactag
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integrated database retrieval system
