Neurospora crassa: NCU05423
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Entry
NCU05423 CDS
T01034
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ncr
Neurospora crassa
Pathway
ncr03022
Basal transcription factors
ncr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCU05423
09124 Replication and repair
03420 Nucleotide excision repair
NCU05423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncr03021
]
NCU05423
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU05423
Transcription machinery [BR:
ncr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCU05423
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCU05423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Interferon
Motif
Other DBs
NCBI-GeneID:
3879394
NCBI-ProteinID:
XP_963246
UniProt:
Q9P5N7
LinkDB
All DBs
Position
II:complement(1591321..1594026)
Genome browser
AA seq
663 aa
AA seq
DB search
MAPIEIPRGQASYKKREGIITLTPDKTALIWSPLPGTGPPVISLSVSNITNLQQTPKTNP
KVVLRVVEKPKAPGADPAAYPFQFTHATEARNEADAIKDLLSQIIAELRGDDPSLPKPAK
SGPNGAGASAAMAMASAVNSKHLPFRWFEDDMLKADVELQQSLMKKDKALAHIYNDAKLS
KPDSLSDASFNSQFWATRISLLRAYAIELNQKKGSYNVLSTIKPRTENGELKLNINHEQV
QLIFQQHPLVKRIYNENVPKLTESEFWSRFFLSRLSKKLRGERITDNDNTDPLFDKYLEA
DNTMAVPAKITATSVPPIINIEGNEENQGGFRGGNLKDVEMRPRANIPIIKTLNSLSEKI
MANVAPTDVDPSAASYSKDGIADALSKQLALQDLRGDAEAQLIRLSVKDTSTFFTGNQPS
LTDQEAADARLYATQVPSDVLFEVQADMDTLDSDGRGGIDLHRSIGVDPDSDDEGNNSLD
SKSGPKPQHVGSRAALRFAQNQILESMKSARSHLTTTTTHGGSHTTTTNASEERPMSLPT
DIAHRATLTCATTAEFLKQFWTVFNNSSNSSPEKQQELAYLADSLVRSKQRIEALADEAE
KRRQEIMEKRKREIREYYQKTGRKAKWVPVGGGRDAVWAAFEGVVGGLERAVAVWEMVKS
GRI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggccccgattgagattccccggggacaggcctcttacaaaaaaagagagggcatcatc
acattaaccccagacaagacagccctgatatggagccccttgccgggcactggcccaccc
gtcatctcactttccgtatccaacatcacaaacctccaacagacccccaagacgaatccc
aaggtcgtcttgagagtcgtcgagaaacccaaggcgcccggagccgatccggctgcctat
cccttccagttcacacatgccaccgaggccaggaatgaggccgatgccatcaaggatctt
ctctctcagatcattgctgagcttcgtggcgatgacccttctctacccaagccggcaaag
tctggccccaacggcgccggcgcctctgccgccatggccatggccagtgccgtgaactcg
aagcatttgccgtttcgctggttcgaagacgacatgctaaaggccgatgtagaacttcag
cagtccctcatgaagaaggataaggccttggcccatatatataacgacgcaaagctgtcc
aagccagattcattatcagatgcctccttcaacagccagttctgggccacccgcatcagc
ctgctacgtgcctatgccatcgagctgaaccagaagaagggctcatataacgtcctatca
accatcaagccccggaccgagaacggcgagctcaagttgaacatcaaccatgagcaggtc
cagctcatcttccaacaacacccactggtcaagcgcatctacaacgagaacgtccccaag
ctcacagagtccgagttctggtcccgcttctttctcagccgtctctccaagaagctccgc
ggcgagcgcatcaccgacaatgacaacaccgaccccttattcgacaagtatctcgaagcc
gacaacaccatggcagtcccagccaagatcaccgccacgagtgtgccccccatcatcaac
atcgaaggcaacgaagaaaaccaaggtggcttcaggggtggcaacctcaaagacgtcgag
atgcgtccgcgcgccaacatccccatcatcaaaacgctcaattcgctctccgagaaaatc
atggccaacgtcgcccccacagacgtcgacccctccgccgcctcctactccaaagacggc
atcgccgacgccctatccaaacaactcgccctgcaagacctccgtggcgacgccgaggcc
cagctgatccggctttccgtcaaggacacctccaccttcttcacaggcaaccagccctcg
ctcaccgaccaagaagccgccgacgcgcgcctctacgccacccaagtcccctcggacgtg
ctcttcgaagtgcaagcggacatggacactctcgactcggacgggcgcggcggcatcgat
ctccaccggtccatcggggtcgatcccgactctgacgacgagggtaataactctctggac
tctaaaagcggacccaagccccaacacgtcggctcccgcgctgcgctacggttcgcccag
aaccagatcctcgagagcatgaagtccgctcggtcgcacctcaccaccaccaccacccac
ggtggctcgcacaccaccaccaccaatgcgtccgaagaacgacccatgtcgttgccgacg
gacattgcccaccgcgctacgctaacctgcgctacgaccgccgagttcctgaaacagttc
tggacggtgtttaataactccagcaacagcagcccagaaaagcagcaagaattggcctac
ctggccgactcgctcgtgcgctcgaaacagagaatcgaggcgctggctgacgaagcggag
aagaggagacaggagattatggagaagcggaaaagggagattagagagtattatcaaaag
acaggccgcaaggcgaagtgggttcccgttggagggggcagggatgcggtgtgggcggct
tttgagggcgtggtgggcgggttggagagggctgtggcggtttgggagatggttaaaagt
gggaggatctga
DBGET
integrated database retrieval system
