Neurospora crassa: NCU05837
Help
Entry
NCU05837 CDS
T01034
Name
(RefSeq) vacuolar protein sorting-associated protein 13a
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
ncr
Neurospora crassa
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncr04131
]
NCU05837
Membrane trafficking [BR:
ncr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
NCU05837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
ATG2_CAD
Motif
Other DBs
NCBI-GeneID:
3876244
NCBI-ProteinID:
XP_960097
UniProt:
Q7S5K6
LinkDB
All DBs
Position
VII:complement(3997660..4008544)
Genome browser
AA seq
3209 aa
AA seq
DB search
MLEGLVAGLLNRFLGMYVKNFDPTQLKVGIWSGDVKLRNLELRREALDQLKLPINVVEGH
LGELTLTIPWSNLRGAPVKVYIQDVYLLASPKEEAEYNEEEEERRKQRIKMEKLDSAELL
KERNQEGLSPEEQKRSQSFASSLVTKIVDNLQVTIKNIHVRYEDAISAPGHPFALGLTLE
EFSAVSTDGEWHPTFIHDSTKTTHKLATLDALAVYWDTDAILLGPGREAIPPGHEPKPHD
VILAAFGSMIAKTNGDLPENHQFILKPVSGQAKLELDKSGSATVPKFKANLLFDEIGVVL
DDYQYRDALMMVDLFHYFIRHQEYKKYQPKGVRPKEDPRAWLQFAVNAVRSKIHERNRRW
SWDFFRERRDDRKRYIELFKKRKQDQQLSPEENDDLTKLEWKLDYEDLRFWRSLARNQLK
RENAEALRNRPPPSAQPQQQGWLAWAFGSKPSQQQQQEKQLEDENTQITEEQRKELYEVI
DWDEKTALAAEVDVPRDTVEMQLEASLSTGSFTLKQNPHGDSRDLISLHFDVFKAKGLKR
PDSFLADVSLGGLRVNDGTTPNSLFKEIVRVKDAPDTHLAPRLSIAELEQSSDEAFFQFQ
VEQNPLDGQGDIAVTAKLKPLEIVWNPNVVVGVVDFFRPPERHMDSINALMETAGATVEG
LRAQTRAGLEFALEEHKTLNAKLDLQAPLIIIPESITSKQSTCLILDAGHISVNSELVDK
DTMKEVQSKQRQSFTEEDLKRLESLMYDRFLVKLSSTQVLIGPSIEETKQQLVDKDDKML
HIVDKITVDFVVETSILPKAPNLTKLRVSGHLPVLHASVSDAKYKSLMRIIDVAIPKLGG
ADTPSQPAGQPGLRPRLASNASTASHRLLEHRPSAQLLPFSTSHQQAIILDDDDHDEDED
AFEDAKDGSATDQLKLQQRNFEFKFAVDELKGSLYRSDPDGKAPDQLLVDLVAQRFDLQF
YIRPFDMSAEVSLGSVTVDDFVDNPPAEFKAIVSSGDVEESGEVQDLVRVKFVKVRKDSP
EFMPVYDGVETNLDVAISTINLVVTRKTLLTLLDFVLVTFTNTANPNPPPPNAITDDGSE
TNIEVVPPAPPQQISDSAIRVKVDLKSIRLILNNDGIRLATLSFNHADVGVFILGKTMRV
AARLGDLNLVDDVNLGVSEDSSIRQLVAIQGEELADFRYETFDSGRIESYPGYDSSIYLR
AGSVKINFLEEPFRKIVEFLVKFGKMQAIYNAARQAAANQANQFQQSPSKVKFDVVVKTP
IVVFPRHVRPDRPKRDLITAYLGEIYAQNKFVPLDDSENAEIAMKLTAGIRNIKLTSNFH
YNDGQEEELELIDKVDLGFQITYAEHKEGVKRPDLEIEGNMSDFNLRLTQYQLNSLLEIS
RSVPAAFSGDAEQNRLDAERDVDDRTLSKARTMSGFDDNGGNEQRIDMRPELGPKAETWT
KLDLIFTVNTIGLELINAPEDRPVGDLDAASLSKFSLDSSRLKTRMDSNGSLEAEFVIQS
FTIYDTRQRETNKFRRIMTSGNKDVQQLMASVTMSGGKERNIIAMVAVDSPRVIFALDYL
FAIQNWVTVGLKVPEPEVPEKSPLDTPDDMSDADSVAVSYTGRRSESIDQRLGPSELQTE
PPKQESKTRLAYRVNVVDAQIILIANPLSSSSEAIVLGTKQVLLSQQHALTFQVSECGMF
LCRMDRFDDARLRIIDDFSIQMSMDTTKPSTTNIHVDIEPLILRVSLRDILLVMQIVSKA
SELSGNTPTEPKGTTSDQKAKQLKSSDMKQRTASGKGTSTVANKSKRTGTKTGTTDPRSQ
KAGQQPHDITKAPPRYEQLTAAIEGIRLVLIGDVHELPILDMSIKSFTTSAENWSSNLKA
EAAIEMYTNIFNFAKSAWEPLIEPWQVGFGIARDQSTGLMSVDVSSKKTFDVTLSTASIA
LLSKSMAFLAQDEDVLGKPRGVEAPYRIRNYTGFNIIMQAKREGTEETTPLRLEDGQEVP
WSFENWEKVRESLSGESHGTSNVAIQLEGSGFDTVKNIRFTREGEFLYALKPKTDEVLHK
LMVDVKLGTDNVKYVTLRSPLLVENETDIPVELGVYDAQEGHLLKIEKIAPGESRPAPVG
AVYTKSLLVRPDPGFGYGWSNDTLWWRDLLKRPTKTLMCKGEHGEPFYFQLSARYDKANP
ATRTYPYMRLKLSAPVTIENLLPYDFKYRIYDKNTKKDWSNFLRKGGVSPVHVVELSHLL
LLSIDMQDTVFKPSEFAIINSGTSEDFRKETNLVCKDDSGLALNLKLHYFRVPDSGGAFK
VTIYCPYVILNKTGLDVSIRSKGFMQHAKAAAGQQLVDVGESQRKAQPIMFSFGSDDHRN
RALLKVADSDWSRPQSFDAIGSTTEVVLNSPSRNAEIHIGVTVDTGHGKYKMVKTVTLAP
RYVIQNRLGEDINIREPSSSSVLELKTGALRPLHFLQKGAVKQLCLCYPGVDNQWTAPFN
ISDLGTTHVKIARAGQRQRLVRVETLMEESTIFLNLTMETKNWPFSMRNESDTEFTFYQA
NPNLDEDGIEDHSGWRPVRYRLPPRSIMPYAWDFPAAKNKEICISANGKNRHVKLTEIGN
LVPMKFVDANGQTKVIDINVIADGPTQTLILSNFKQSKSLYKQKSNASSTDRSTFEAKEL
DTGVTFRAQLRLSGIGISLINSQLKELAYITFRDVQLRYSDSQLYQTVSLAVKWIQIDNQ
LYGGIFPIILYPSVVPKRAQEIEAHPSLHAMVTRVKDDSYGVEYIKYATILLQEMTVELD
EDFVYAVLEFSKVPGASWSSSDEEDKLCDDSIDVPQPKQLDSGRDIYFEVLNIQPMQLDL
SFVRTERVNVEDKTSSKNPIMFFFNVMTMAIGNINDAPVRFNALMLENMRVSVPVLIQRI
SNHYSQEALYQVHHILGSADFLGNPVGLFNNISSGFADIFYEPYQGLIMSDRPEDFGIGL
ARGAGSFFKKSVFGFSDSFSKVTGSFAKGLAAATMDKQFQDRRRITRARNHPKHALFGVT
AGANSLFTSVASGVGGLARKPLEGAEQEGALGFFKGIGKGVVGLATKPAIGVLDFASNVS
EGVRNTTTVFDGTELDRVRLPRYIPPDGIIRPYSQREALGQSWLKQIDNGKYFDEQYIAH
LELPTEDKVVMVTFARILLIRSRKLQTEWDVPLKDVQTIAKERTGLSLTLRGGTNGPFIP
IGEESGRTFLYRQVAIAVEEFNRRFRGLE
NT seq
9630 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaggtctcgttgccgggttgcttaaccgcttcctgggcatgtacgtcaagaac
ttcgaccctacacagctcaaggttggcatctggtccggcgacgtcaagctgcgcaacctc
gaactgcgccgtgaagccctcgatcagctcaagctgcccatcaacgttgtcgaaggccat
ctcggcgaactcaccctgaccattccctggtccaatctgcgcggcgcccccgtcaaggtc
tacattcaggatgtctatctgcttgcatcacccaaggaggaggccgagtacaacgaagag
gaagaggaacgccgaaaacagcgcatcaagatggagaagctggactccgccgaattgctc
aaggagaggaatcaggaaggcctcagtcccgaagaacaaaaacgcagccagagctttgcc
tcgagcctcgtcaccaagattgtcgataacctgcaggttaccatcaagaacattcacgtc
cgctacgaggatgccatctcagccccgggccatcccttcgccctcggtctcactctcgag
gagttcagcgccgtcagcaccgacggagagtggcatcctacctttatccatgattccacc
aagaccacccacaagctagctactttggatgccttggctgtctactgggataccgatgca
atacttctaggtccgggacgcgaggccattccgccgggacatgagccaaagccccacgac
gtaatcctcgccgctttcggatccatgatcgccaagacaaatggtgatctccccgaaaac
catcaatttatactcaaacccgtctccggtcaagccaaactcgagctcgacaaatcgggc
agtgccaccgttcccaagttcaaagcaaatctcctctttgacgaaatcggtgtcgtgctg
gacgattatcagtaccgagatgctcttatgatggttgacctcttccactattttattcga
caccaggaatacaaaaagtatcagcccaagggcgttcggcccaaagaagatccccgtgct
tggctccagtttgccgtcaatgctgtccggagcaagattcacgagcgaaacaggaggtgg
tcatgggactttttccgcgagcgacgagacgaccgcaaacgatacattgagctcttcaaa
aaacgcaagcaggatcagcagctctcacctgaggaaaacgatgatttgaccaagctcgaa
tggaagcttgattacgaagacttgcgattctggaggtccttggcgcgcaatcagctaaag
agagaaaatgctgaagccctcaggaaccgtcctcctccctcggctcaacctcagcaacag
ggctggcttgcttgggcctttggttccaagcctagtcaacagcaacagcaggaaaaacaa
ctggaggacgagaatacgcaaattacagaagaacagcgcaaggagctgtacgaagtcatc
gactgggatgaaaagaccgctcttgccgccgaggttgatgttccaagagacactgttgag
atgcaactcgaagcttcactcagcactggcagtttcactctcaagcagaacccgcatggc
gactccagagatctcatcagtctgcatttcgatgtcttcaaggccaaaggccttaaacgc
cccgactcgttccttgctgacgttagcttgggcggattgcgcgtcaatgatggcaccaca
cccaacagcctgttcaaggagattgtccgtgtcaaggatgctcctgatacccatctggcg
cctcgcctgtccatcgctgaacttgaacaaagcagcgatgaagctttcttccagttccag
gttgagcagaatcccttggatggtcagggagatattgcagttaccgccaagctaaagccg
ctcgagattgtttggaaccccaatgttgtcgttggagtcgttgactttttccgtcccccc
gagagacacatggattccatcaatgcgctcatggagactgccggcgccaccgtcgagggt
ttgcgtgcgcagacgagagccggcctcgagtttgctctcgaggagcacaagacgctaaac
gcaaagctggatcttcaagctccgctcatcatcattcccgaaagtatcaccagcaagcag
tccacctgcctcatcctggatgccggtcacatcagcgtcaacagtgaattggtggacaag
gacaccatgaaggaggtgcaatccaagcaaaggcagtcattcaccgaggaggatttgaag
agactggagtcgctcatgtatgaccgcttccttgtcaaactttcctctacacaggtcctg
atcgggccgtccattgaggaaaccaagcagcaattggtcgacaaggatgacaagatgctg
catatcgtcgacaagatcaccgtcgattttgtcgtggagacatcaatcctccctaaggcc
ccgaacctgacaaagctcagagtttccggtcacctgcccgtgttgcatgccagcgtatct
gatgcaaagtacaagagtctgatgcgcatcattgacgttgctataccaaaactcggtgga
gctgacaccccgtcgcagccagcagggcagcctggcttgcgtccgcgtttggcaagcaac
gcctcaacggcatcgcacaggctgttggagcataggccatcggcccaactactacccttt
agtaccagtcatcaacaagccataattctggatgatgacgaccacgacgaggatgaggac
gcgtttgaggacgccaaggacggttcagcgactgatcagctaaagcttcagcaacgcaat
ttcgagttcaagttcgcagttgatgagctgaaaggatcgctctaccgtagtgacccagat
ggaaaggctcccgatcagctgcttgttgatctggttgctcagcgcttcgatctccagttc
tacatccgcccctttgacatgtctgctgaggtctcgctcgggtcggtcactgtcgacgac
tttgtcgataacccgccagctgagttcaaggctatcgtctcatctggcgatgtcgaagaa
agcggagaagtccaggacttggtccgtgtcaagtttgtcaaagtcaggaaggattcaccc
gagtttatgcctgtttacgatggcgtcgagacgaacttggatgttgcaatctccacgatc
aatcttgtcgtgacacgcaaaacactgctcacacttctcgatttcgttctcgtcaccttt
accaacacggccaatccgaatcctccacctccaaatgcgattactgacgatggctcggag
actaacatcgaagttgtgccgccagcccctcctcaacagatttcggacagtgcaattcgg
gtcaaggttgatcttaagagtatcaggctgattctgaataacgacggcatccggctagct
accttgtctttcaaccatgccgatgttggtgtgtttatcctcgggaaaaccatgcgtgtt
gccgcaagactcggtgatttgaaccttgttgacgatgttaatctcggtgtctcggaggat
tcaagcatacgtcaactggttgccatccaaggagaagagcttgctgattttcgctacgag
acattcgattctggtcgcatcgaatcctatcctggatacgactcgtcgatttatctacgg
gctgggtctgtcaagatcaacttcttggaggaacctttccgcaagattgtcgagttcctt
gtcaagtttggcaagatgcaggctatctacaacgccgctcgccaagctgctgctaatcaa
gccaaccagttccagcaaagtccaagcaaggtcaagttcgatgttgttgtcaaaactccc
attgtcgtgtttcccagacatgtccgtcccgaccggcccaagcgtgatctcatcacagct
tatcttggtgagatctacgcacagaacaagtttgtaccgctcgacgactcggagaatgcg
gagatcgctatgaagttgactgcaggcatccgcaacatcaaactcacttccaacttccat
tacaatgatggccaggaggaagaactcgagctcatcgacaaggttgaccttgggttccaa
atcacctatgcggaacacaaggagggcgttaaacggccagatctggagattgagggcaac
atgtcggacttcaatctgcggttgacccagtaccaactgaactcgctgcttgaaatttcg
cgttccgtccctgctgccttttctggtgacgcagaacaaaacaggctcgatgccgaacgc
gacgttgacgacagaacccttagtaaggctaggaccatgtcgggctttgacgacaacgga
ggcaatgaacaacgcattgacatgcgcccagagcttggcccgaaagctgaaacctggacg
aagctggacctcatctttactgtcaacaccattggtttggagctgatcaacgctccggag
gaccgccctgtaggtgatctcgatgcagccagtctgtccaaattcagtctcgattccagc
agattgaagacccgcatggactccaacggcagtcttgaggccgagtttgtcattcagtct
ttcacaatctacgatactcgccaacgcgagaccaacaagttccgtcgcatcatgacaagc
ggcaacaaagacgttcagcagctcatggccagcgttaccatgtctggaggcaaggaaagg
aacattatcgccatggtcgccgttgatagccctcgcgtcatctttgcactagattatctt
ttcgccatccagaattgggtcactgttggcctgaaagtaccggagcctgaggtcccggag
aagagcccactcgacacacctgatgatatgagtgatgcggactctgtggcagtttcatac
accggcagacggtccgaaagcattgatcagcggcttgggccctctgagctccagacggag
ccaccgaagcaggagtctaagacgcgccttgcctatcgggtcaatgtggttgatgcccag
atcattttgattgcgaacccgctcagctcaagttctgaggccattgtcttgggaaccaag
caagttcttctgtcgcaacagcatgccttgaccttccaagtttccgagtgcggaatgttt
ctgtgccgcatggatcgtttcgatgatgcacgcttgaggatcatcgatgacttttcaatt
cagatgtccatggatacgacaaaaccgtccactacaaacattcatgttgatatcgagcca
ctcatcctcagagtgtcgctgcgggatattctgcttgtcatgcaaattgtgagcaaggca
tcggagttgtcaggcaacactcccaccgagccgaagggcacaacatcggatcagaaagcg
aagcagctcaagtcttctgacatgaaacaacgaaccgccagtggcaagggaacatcaact
gtcgcgaacaagtccaagcgcacgggcaccaaaactgggaccaccgatcctcggtcccag
aaggcaggccagcaaccgcatgatatcaccaaggcaccgccaagatatgagcagctcacg
gcagcaattgaaggaattcggcttgtcctcatcggagatgtgcatgaacttcctattctc
gacatgagcatcaagtcattcacgactagtgcggagaattggtcgtcgaacctcaaggca
gaggcagccatcgagatgtacaccaacattttcaacttcgccaagtcggcctgggagccg
ctcattgaaccttggcaggtgggcttcgggattgcccgtgatcaaagcaccggcttgatg
tcagtcgacgtctcgtccaagaagacattcgatgtgactctttccaccgccagcattgca
cttctctccaaatcaatggccttcctcgctcaggatgaggatgtgctaggcaagcctcgt
ggtgttgaagcgccgtatcgtatccgcaactacaccggcttcaacatcatcatgcaagcc
aagagagagggcaccgaggagaccacacccctgcggcttgaagatggccaggaggttcct
tggagctttgagaattgggaaaaggtgcgagaaagtctctctggcgaaagccacggcacg
agcaacgtggccatccagttggagggcagcggctttgacacagtcaagaacatccgcttc
actcgtgagggagagttcctctatgccctcaaacccaagacagatgaggtcctgcacaag
ctcatggtcgatgtgaaacttggcacagacaatgtcaagtatgtcaccctgcgtagcccg
ctgttggtcgagaacgagacagacataccagttgagcttggcgtttatgacgctcaggaa
ggacacctgctcaagatcgaaaagattgcccctggcgagagcaggcctgcccccgttggc
gctgtctacacgaagagcttgctcgtccgccctgatcccgggtttggatatggctggagc
aatgatacactctggtggagagaccttctgaaacgcccgaccaagactttgatgtgcaag
ggtgaacatggagagcccttttacttccagttatcggctcgatatgacaaggccaatccg
gcaacaaggacctacccgtacatgcgcttgaagctctccgcccctgtcaccattgaaaat
ctacttccgtatgacttcaaatacaggatctacgacaagaacaccaagaaagactggtcc
aacttccttcgcaagggcggggttagccctgtgcacgttgtcgagctgtcccatctgctc
ctccttagtatcgacatgcaagataccgtcttcaagccaagcgaattcgcgatcatcaac
tccggcacctccgaggacttccgcaaggagacgaaccttgtatgcaaggacgattcaggc
ctggcgctcaatctgaagctgcactacttccgcgtccccgatagcggtggcgcgttcaag
gttactatctactgcccctacgtcatcctcaacaagacggggctcgatgtgagcattcgc
tccaagggcttcatgcagcacgccaaagcggcagccggccagcagttggtcgatgtcggt
gaaagccaacgtaaagcccaaccaatcatgttttcctttggtagcgacgatcacaggaac
cgtgcattgctcaaggttgccgattccgactggagcagaccgcagagtttcgacgccatt
ggaagtaccactgaagtggtgctcaactcaccctcgcgcaatgccgagatccatattggt
gtcacagtcgatacgggccatggcaagtacaagatggtgaagacggtcacgcttgccccg
agatatgtcattcagaataggctcggcgaagacatcaacatccgagagccgagctcgtcg
tcagttctcgagctcaagaccggcgctcttcgtccgctgcacttcctccaaaaaggtgcc
gtcaagcagctctgtctctgctacccaggtgttgataaccagtggacggctcccttcaac
atttcagatttgggtaccacgcacgtcaagatcgctcgtgccggtcaacggcagagactc
gtcagagtagagacactcatggaggaatcgaccattttcttgaacctgaccatggagacg
aagaactggcccttctcgatgcggaacgagagtgacactgagttcacgttctaccaagcg
aatccgaaccttgacgaggacggaatcgaagaccactcgggctggcgtcccgtgcgttac
cgtcttccgccccggagcatcatgccctacgcgtgggacttcccggctgccaaaaacaag
gagatttgcatcagcgccaatggcaagaaccgtcatgtgaagttgaccgaaattggaaat
ctggttccgatgaagttcgttgacgctaatggccagaccaaggtcatcgacatcaatgtc
atcgccgacggacctacccaaactctgatcctgtccaacttcaagcagtccaagagtctg
tacaagcaaaagtcgaacgccagctcgacagaccgtagcacgtttgaagccaaggagttg
gacacaggcgtcactttccgtgcgcagctgagactatccggcattggcatttcactaatc
aattctcaactgaaggaactggcctacatcaccttcagagatgtgcaacttcgatacagc
gactcacagttgtaccagactgtcagtctggctgtcaagtggatccaaatcgacaatcag
ctgtacgggggcatattccccataatcttgtaccccagtgtcgtgccaaagcgcgcacaa
gagatcgaggcccacccgtcgctgcatgccatggtaactcgtgtcaaggacgactcatac
ggtgttgaatatatcaagtacgccacgatcctcctgcaggagatgactgttgagcttgac
gaagactttgtctacgccgtactcgaattctccaaggtgccgggtgcatcatggtcttca
tccgatgaagaggacaagctgtgcgacgacagcattgatgttccgcagccgaagcagctg
gattctggacgtgacatctactttgaggtgttgaacatccaaccgatgcagctcgactta
tcgtttgtgagaacggagcgtgtgaacgtggaggacaagacatcatccaagaacccaatc
atgttcttcttcaacgtcatgaccatggccattggcaacatcaacgatgcccccgttcgg
ttcaacgccctcatgctcgagaacatgcgcgtctctgttccagtcctcatccagagaatc
tcgaatcactacagtcaagaggccctctaccaggtacaccacattctgggaagtgccgat
ttcctgggcaacccggttggtctgttcaacaacatcagttctggttttgcggatatcttt
tacgagccataccaaggtctgatcatgtcggataggccggaagatttcggtattggtcta
gcccgtggcgccggttccttcttcaagaagtccgttttcggcttcagtgactctttctcc
aaggtcacgggtagttttgccaagggtctcgcggctgccaccatggataagcaattccag
gaccgtcgccgcatcacacgtgctcgcaaccatcccaagcacgccctctttggcgtcacc
gccggtgccaacagcctgttcacctcggttgcttcgggtgtcggaggtcttgcccgcaag
ccgctcgaaggtgcagagcaggaaggtgctctcggtttcttcaagggcatcggcaagggt
gtggttggtctggcaaccaaaccggccattggggtcctagactttgcctccaatgtgagc
gaaggcgtgcgcaacaccaccacggtctttgacgggaccgaactcgaccgcgtcagactg
ccgaggtatatccccccagacggtatcatcaggccctacagccaacgtgaggcgctaggc
cagagttggctcaagcaaatcgacaacggcaagtactttgatgagcagtacattgcccat
cttgagctgccaaccgaggacaaggtggttatggttacatttgcacggatcttgctcatc
aggagcaggaagttgcagacggagtgggatgtgcccttgaaggatgtgcagaccattgcg
aaggagaggacgggcttgagcttgacgctgagaggagggactaatgggccctttatccca
attggcgaggaaagtggaaggacattcttatatcgccaggtggcgattgctgtggaggag
tttaatcgccggttccggggattggagtaa
DBGET
integrated database retrieval system
