Neurospora crassa: NCU05984
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Entry
NCU05984 CDS
T01034
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ncr
Neurospora crassa
Pathway
ncr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCU05984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU05984
Enzymes [BR:
ncr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCU05984
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCU05984
DNA repair and recombination proteins [BR:
ncr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCU05984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Fpg-like_C
Ribosomal_S13
Motif
Other DBs
NCBI-GeneID:
3874784
NCBI-ProteinID:
XP_958637
UniProt:
Q7S212
LinkDB
All DBs
Position
VI:complement(3196275..3199141)
Genome browser
AA seq
415 aa
AA seq
DB search
MPEIAEIARAVHFLRLHFVGKVIKHAEAIDDGNVFGKVGTDGPKMAAGLIGKKMVSAGTQ
GKYFWMELSKAPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIETE
DGDEMAFTDPRRFGRVRVVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLREKMKSRRV
PIKALLLDQAVISGIGNWVADEVLYHAKLHPEQYCNDFSDAEMKQLYESIRYVCQTAVDK
LGDSDQFPDDWLFNYRWGKGSKNAHSHTPNGDKLAFLTVGGRTSCYAPARQKKTGQIVSG
VKEEPLESAEEKDSSKKAPGTKGAKSKNKSEELEADGSKVKAEMAVSRKRKIKIEEDGEV
NFTPHNAKAHPSKKPTRSQYFEDAKKPNGDAGQTEEAKTDISGRRRSGRLQSKAA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaatcgcggagattgcgcgtgctgtccactttctgcgcctgcactttgtaggc
aaggtcatcaagcatgcagaagccattgatgacggcaatgtgtttggaaaggtcggtaca
gatggaccaaagatggcggctggccttatcggcaagaagatggtatcagcaggaactcaa
ggcaaatatttttggatggaattgagtaaggctcctcatcttgtaatgcactttgggatg
accggctggatccatatcaagggcgagaggacagcatacacgaactactacaagaagatg
aagcctgacgaacttgacaaatggccgcccaagtattggaagttcaagatcgagacagaa
gatggcgatgagatggcgtttaccgatccgcggcgctttggccgtgtccgtgttgtggac
tgccctggaaaggatattcggaagtactcacctttggtggaaaacggcccagatccggtg
gtcgacctcgatgtgttcaccgaggattacttgcgggagaagatgaagtcgcgccgcgtg
cccatcaaggctcttttgcttgatcaggctgttattagtggcattggaaattgggtcgct
gatgaagtattgtatcacgcaaagcttcacccggaacagtactgcaacgacttcagcgat
gctgagatgaagcagctttacgagtccatccgatatgtgtgccagacggctgtcgacaag
cttggcgattccgatcagttcccagacgactggctcttcaactatcgctggggtaaaggc
tccaagaatgcacacagtcacactcctaacggcgacaagttggcctttctcactgtcggc
gggcgcacgagttgctatgcacccgccaggcaaaagaaaaccggccagattgtgtccggc
gtgaaagaagaaccccttgagtcggctgaagagaaagactcctcgaagaaggcaccggga
acgaagggggccaaatcaaagaacaaaagtgaggagctagaagccgatgggtcaaaggtg
aaggcggaaatggccgtctcaaggaagcggaagatcaagatagaagaagatggcgaggtg
aattttacgccacacaacgcaaaggcacatccctcaaagaagcctacgcgctcgcaatac
tttgaagacgccaaaaagccgaatggggacgcagggcaaacagaagaagccaagactgac
atctcaggaagaagacgctctggaaggttgcaaagtaaagcagcttga
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