Neurospora crassa: NCU06314
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Entry
NCU06314 CDS
T01034
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ncr
Neurospora crassa
Pathway
ncr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCU06314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU06314
Enzymes [BR:
ncr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
NCU06314
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
NCU06314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
nSTAND3
AAA
AAA_16
AAA_18
RuvB_N
AAA_5
ABC_tran
AAA_24
AAA_28
AAA_22
ATP_bind_1
Mg_chelatase
IstB_IS21
RNA_helicase
AAA_25
AAA_33
NACHT
KTI12
NTPase_1
Rad17
Motif
Other DBs
NCBI-GeneID:
3878710
NCBI-ProteinID:
XP_962576
UniProt:
Q7SAB7
LinkDB
All DBs
Position
IV:2944689..2947136
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AA seq
379 aa
AA seq
DB search
MLSYINLHFGLQDHERAAAAQAQQQHPTHHQQQQQGRGAGAGVARSKPGPRVLICGPPGV
GKTSLAKLLAALATRMGSQPLVANLNPTDGLLCLPGTLGAAVFGTLMDVEEPAGGFGVTN
TPISGPSAVPVKNPLTFYFGHEKVEDDVDMWRQMTERLAVLARRKFERNRDVRVAGLLVD
TAPVEAGDKEGQELLGWAVRQFDANFVVVLGSEQLKTELGQRFASEKTSFEEPITVLGLD
KSDGAVQIDKAWRQKSTETAIKEYFFGGIKARLSPFTQSASFDELVVFKAPDEPYEGAPV
LERVEITPEMAHWTLAVMIASVTDSPQAIRFSSVLGFIVIADVDQERRRVKFLSPVSGRL
GNHPLIWGRWPEPYLNLLA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcttagctatatcaacctccactttggcctccaagaccacgagcgtgccgcggccgct
caggcacaacaacaacatcctacacaccaccagcagcagcaacaagggagaggagcagga
gcaggagtagcgaggtcaaaacccgggccaagagtgctgatctgtggtccacccggcgtc
ggcaagacctcgctggcgaagctcctcgctgccctcgccacgcgcatgggctctcagccg
ctggtagccaatctgaacccgaccgacgggctgctgtgtctacccggaacgctgggtgcg
gccgtgttcggcacgttgatggacgtggaggagccggcgggtgggtttggcgtgacgaac
acgccgatcagcggtcccagcgcggtgccagtcaagaacccgctcacattttactttgga
cacgagaaggtggaggacgacgtggacatgtggaggcagatgacggagcggctggcggtg
ttggccaggcgcaagtttgagaggaatcgggatgtgagggtggcggggttgttggttgat
acggcgccggtggaggcgggggacaaagaggggcaggagctgttggggtgggcggttagg
cagtttgatgcaaacttcgttgtggtgctaggctctgaacagctaaagacagaacttggg
cagcggttcgcaagcgagaagacgagctttgaagagccgattactgtcctcgggttagac
aagtcggatggtgctgtacagattgacaaggcgtggaggcagaagtctacagagacggcg
attaaggaatacttctttggtggcattaaggcgcgcttgagcccctttacacagtcagcc
agtttcgacgaactagtcgttttcaaggcgcctgacgaaccctatgaaggcgccccagtc
ctcgagcgagtcgaaatcacccccgaaatggcccactggacgctagcagtcatgatcgct
tccgtgaccgactcgccgcaagccatccgcttttcctcggtcctgggcttcatcgtcatc
gccgacgtggaccaggagcgcaggcgggtcaagttcctgtcgccggtcagcggtcggctg
ggcaaccacccgctgatatggggacgctggccggaaccgtatctcaacctcctggcgtag
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