Neurospora crassa: NCU06318
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Entry
NCU06318 CDS
T01034
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ncr
Neurospora crassa
Pathway
ncr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCU06318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncr03041
]
NCU06318
Enzymes [BR:
ncr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCU06318
Spliceosome [BR:
ncr03041
]
Complex C
Other components
Step II factors
NCU06318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
T2SSE
AAA_30
nSTAND3
SLFN-g3_helicase
Cas3-like_C_2
ABC_tran
AAA_16
RimM
TsaE
SRP54
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
3878714
NCBI-ProteinID:
XP_962580
UniProt:
Q7SAB3
LinkDB
All DBs
Position
IV:complement(2931894..2935916)
Genome browser
AA seq
1179 aa
AA seq
DB search
MDDLESLELLSLVSKVTSELQNHLGVSEKTLAEFIIAQRVECGSFDEFKQKLATIGADFP
PSLVESIDRLVLTLHPKFKGQNHGQTRADENEKHGQSAEEKTKVFKGLSIPDKEVDVIDD
TLALLESLEPKRAEKERPRKRSRTPERDDYADDYGKRKRKERYRSRSRSRSRSISPPRGR
RKGRYDDEYDGDFRRPPPREVDDSPILYKVYEGHVTGIKDFGAFVNLHGVKGKVDGLVHV
SAFGQRVNHPSDLLSKGQEVKVKVIKLEGGRVGLSMKDVDQETGMDLAPQLRIGSGANME
ALGGRGGYDTKNVVTNGFGDKGAFQATANARQHKKRMTSPERWEIRQMIAAGIAKASDYP
ELEEDYQATLKGEGQMELEEDVDIEVRDEEPPFLAGQTKQSLELSPIRVVKAPDGSLNRA
AMAGTNLAKERKELRQQETEAKKAEEKKVDLSSQWQDPMANPETRKFASDLRKNAQAAPA
APDAVPEWKRAVAPKEVSLGRRTNMSIKEQRESLPVFAFREQLITAVRENQVLIVVGETG
SGKTTQLTQYLAEAGFTNNGMIGCTQPRRVAAVSVAKRVSEEVGCQLGQEVGYTIRFEDV
TSPATKIKYMTDGMLQREILIDPDLKRYSVIMLDEAHERTIATDVLFALLKKTMKRREDL
KVIVTSATLDADKFSEYFNQCPIFTIPGRTFPVEILYSREPESDYLDAALTTVMQIHLSE
PMGDILLFLTGQEEIDTACEILYERMKALGPNVPELLILPVYSALPSEMQSRIFDPAPPG
SRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRA
GRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSNTILMLKAMGINDLLRFDFMDPPPV
NTMLTALEELYALAALDDEGLLTRLGRKMADFPMEPALAKVLIASVEKGCSDEMVTIVAM
LNLPNVFYRPKEKQAQADQKKAKFHDPHGDHLTLLNVYNSWKNNGYANPWCFENFIQARS
MRRAKDVRDQIVKIMDRHRHPVISCGRDTNKVRQALCAGFFRNAARKDPQEGYKTLIEGT
PVYLHPSSALFGKQAEWVVYHTLVLTTREYMHYTTSIEPKWLVEAAPTFFKMAPTDKLSK
RKKAERIEPLYNKYAGADDWRLSAQRRGGRGGGGGGTWG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttggagagcctcgagcttctgtcgctcgtgtccaaggtcacgtccgagttg
cagaaccacttgggcgtcagcgaaaagacgctcgccgagttcatcatcgcccaacgagta
gaatgcgggtcattcgacgagttcaagcagaagttggccaccatcggcgccgacttcccg
cccagcttggttgagagtatcgacagacttgtcctgaccttgcacccaaagttcaagggc
caaaaccatggacagacccgcgccgatgaaaacgagaagcatggtcaatctgccgaggaa
aagacaaaggtgttcaagggtctgtccatcccggacaaggaagtggatgtcatcgacgac
accctggccttactcgaaagcctcgagcctaagagagcggagaaagaacgaccaaggaaa
cgaagccgcacccccgaacgagacgactatgcagacgactacgggaagaggaagcgcaag
gagcgataccggtcaaggtcgaggtcaaggtccaggtcaatttcgccaccaagaggccga
cggaagggccgatatgatgatgaatacgatggtgatttccgacggccaccaccgcgcgag
gtggacgactcccctattttatacaaggtttacgaaggccacgtcacgggaatcaaggac
tttggtgcctttgtcaacctgcatggcgttaagggcaaggttgacggcttagtacatgta
tccgctttcggtcagcgtgtcaatcacccttcggatctcttatccaagggtcaggaagtc
aaagtcaaagtcattaagctcgagggaggtagagtaggtttgtcgatgaaggacgtagac
caagagacgggcatggacctcgcaccgcaattgcggataggttcgggcgccaatatggag
gcattgggcgggagaggaggatacgatacaaagaatgttgtcaccaacggctttggtgac
aagggagcattccaagcgacagcaaatgccaggcaacacaagaagaggatgacgtctcct
gaaagatgggagattcgtcaaatgattgcggcaggcattgcaaaggcatccgattaccca
gaacttgaagaggactaccaggcaacactcaaaggcgagggacagatggagcttgaggag
gatgttgatatcgaggttcgagacgaggaacctcccttcctggctggacagaccaaacag
tcactcgagctgtcacccatccgcgttgttaaagctcccgacgggtcccttaaccgcgcc
gccatggcaggcaccaatcttgccaaagaacgaaaggaactgcggcagcaggagactgaa
gccaaaaaagcagaggagaaaaaggttgacttgtcctcccaatggcaagatcctatggcc
aacccggagaccagaaagtttgctagtgatttgcgcaaaaacgctcaagcagcaccagcg
gctcccgatgctgttcctgagtggaagagggccgttgcacccaaagaagtgtcgctaggc
aggcgcaccaacatgagcatcaaggagcaacgagaatctctccccgtctttgcctttaga
gaacaactaatcacggctgtgagggagaaccaggtccttattgttgtcggcgagacggga
tccggaaaaacgacacagcttactcaatacctggctgaagccggctttactaacaatggg
atgattggatgtacgcagcctcgccgtgtcgccgccgtgtctgttgcgaaacgtgtttct
gaagaagtcggctgccagcttggccaagaagttggttataccatcagattcgaggacgtc
accagcccagcaaccaagatcaagtatatgaccgacggtatgcttcagagagagatcctg
atcgaccccgaccttaagagatactcggtcattatgcttgatgaggcccacgaacgtacc
atcgccaccgacgtgctctttgcccttttgaaaaagacaatgaagagaagggaggacctc
aaggttatcgtcactagtgctaccttggatgccgacaagttcagcgagtacttcaaccaa
tgccccatctttaccatccctggtcgtacattccctgtcgagattctctactcccgtgag
ccagagtcagactacttggatgccgctctcaccaccgtcatgcaaatccatctcagcgag
ccaatgggcgacatccttttgttcttgacaggacaggaagaaattgacacggcttgcgaa
attctatacgaacggatgaaagccttgggccctaacgttcctgagcttctcatcttgccc
gtttactctgcccttcctagcgagatgcagagtaggattttcgacccagcgccgccaggg
agtcgaaaggttgttatcgcgaccaacattgccgagacatccatcacgatcgaccatatc
tactacgttgttgatccagggttcgtcaagcagaacgcatacgaccccaaacttggcatg
gactcgttggttgtcactcctatttcgcaggctcaagccaaccagagagccggtcgagct
ggtagaacaggaccaggaaagtgcttccgcctgtatacagaagccgcataccagtctgaa
atgttacctaccacaatccccgaaatccagcgccagaatctgtctaacaccatcctcatg
ctgaaggccatgggcatcaacgaccttctccggttcgactttatggacccacctcccgtc
aatactatgcttacagccctggaagagctctacgccctcgctgcgctggacgacgaaggt
cttttgacacgccttggaagaaagatggctgattttccaatggagccagcccttgctaaa
gttcttattgcctctgtggaaaagggctgttcagacgagatggtgactattgtcgccatg
ctcaacctccccaatgtcttttatcgccccaaggagaagcaagctcaggcggaccagaag
aaggccaaattccacgatcctcatggagatcatttgaccctcctcaacgtctacaactcg
tggaaaaacaacgggtatgcgaacccttggtgtttcgagaacttcattcaggcacgttct
atgcggcgcgccaaagatgtgcgtgaccagattgtcaagatcatggatcgccacaggcat
cccgtcatcagctgtggccgcgataccaacaaggtccggcaagctctttgcgccggtttc
ttccgcaacgcggctcgcaaggaccctcaagagggttacaagacgctgatcgaaggcacg
ccggtgtatctgcatcccagctcggcgctcttcggcaagcaagctgagtgggtcgtttat
cacaccttggtcttgaccacccgtgagtacatgcactacacaaccagcatcgagccgaag
tggctggtcgaggccgcaccaaccttcttcaaaatggcgccgaccgacaagctatcgaag
cggaagaaggccgaacggatcgaaccgctgtacaacaagtacgccggcgctgatgactgg
cgtcttagtgcgcagaggagaggcggacgtggtggtggtggcggtggtacttggggttaa
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integrated database retrieval system
