Neurospora crassa: NCU06488 Help Entry NCU06488          CDS       T01034                                  Symbol crf3-1 Name (RefSeq) chromatin remodeling factor 3-1   KO K11786   ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] Organism ncr  Neurospora crassa Brite KEGG Orthology (KO) [BR:ncr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ncr03021]     NCU06488 (crf3-1)    03036 Chromosome and associated proteins [BR:ncr03036]     NCU06488 (crf3-1) Transcription machinery [BR:ncr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SWI/SNF complex      NCU06488 (crf3-1)     RSC complex      NCU06488 (crf3-1) Chromosome and associated proteins [BR:ncr03036]  Eukaryotic type   Chromatin remodeling factors    RSC complex     NCU06488 (crf3-1)    SWI/SNF complex     NCU06488 (crf3-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HSA Bromodomain SnAC ResIII QLQ DEAD HDA2-3 RBR Motif Other DBs NCBI-GeneID:  3873266 NCBI-ProteinID:  XP_957128 UniProt:  Q7RYI6 LinkDB All DBs Position III:complement(1598874..1605246) Genome browser AA seq 1482 aa AA seqDB search MAGVQMPAAVAQHPQMVMAANMSGQQIQEVYARYQQLKKQGVPQNDPEFMKLHNIILAVS RRQQQQQQQQQMQRQQQQQQQQQQQQMAGGAVNGGQPGRAPGPQQTDGVSGAQIPKTPAA KPVGMPTGQPQGGVPYTKAQIQLLKDQIKAFQALSRNQGVPAALQKQLYEFRARRNSAQV AQAVSNASAAQTNSSTPTQDTPKTGSSNGQEEADSTPKARELKTVKLPLEAGLVKNSINY LEHGRRKNRLIIPGIFPTGVDFEQLRADREKIVFNRMSARYAELKSLPGNLAHWDTSKDE VVADDTAKRKAIIEMKKLALYSKQRALRDKVGKQMLHYDNLAMTTNRTMYRRMKKQSVRE ARVTEKLEKQQRDARENRERKKHVEFLQAVQNHKVEIQNVASIQRNKLQKMGRLMYAHHF NIEKEEQKRVERTAKQRLQALKANDEEAYLKLLDQAKDTRITHLLRQTDGFLHQLASSVR AQQREAAERYGDDLQNIPEEESDVDEDEESSRKIDYYAVAHRIKEEVTEQASILVGGTLK EYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIEKKQQNGPYLVIVPLSTL TNWNLEFDKWAPSVAKIVYKGPPNTRKLQQEKIRRGEFQVLLTTYEYIIKDRPLLSKIKW FHMIIDEGHRMKNANSKLSATIQQFYSTRFRLILTGTPLQNNLAELWSMLNFVLPNIFKS AKTFDEWFNTPFANTGGQDKMELTEEEQILVIRRLHKVLRPFLLRRLKKDVEKDLPDKTE KVIKCKFSALQQRLYKQMVTHQKILVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVE NQMNPTNTSNDLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQ YLRLDGTTKAEDRSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ DLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQAGRFDNKSSETD RDAMLRTLLETADMAEVGEQEEMDDEELNMILARNEDELVTFQQLDDERARDPLYGTAPG CKGIPRLMAEKELPDIYLQEGNPIEEEEAVSLGRGARERTKVKYDDGLTEEQWLMAVDDD DDSPEAAAARKAARKERREQNRLKKMAILNNASGSVDASPSVSRASTEEVEVAPPTPKKR GRKPGSKNLEKRPREDGDDEPPVTKKRRGPGGRPKAVSNGDSRMSAEMRTKLQQSMRRIF DGLMNLEVEDDEPAEQLDGDKDEDEGPPTRLIIGPFVKLPPKREWPDYYLMITNPICMKD IEKKMKKEDYHSLSDMRKDLELLVRNCRTFNEETSMICIDANRIEAHFKDQFEKELNDHP ELRTLEDPSSSTFSVGASSTKDGSVAPSTITNFTETPQPSSAPPVLAPAPTQPTRIKLVS SSTSYNNAASSSSAMTSAVNSMSVSQVMNGTSAADSEAGDED NT seq 4449 nt NT seq  +upstreamnt  +downstreamnt atggcgggtgtccaaatgcctgctgccgttgcgcagcacccgcaaatggtcatggctgcc aacatgagcggccagcagattcaggaagtctatgcgcgctaccagcaattgaagaagcag ggcgtccctcaaaacgatcccgagtttatgaagctccacaacatcatcctggccgtatcc cgcagacagcagcaacaacagcagcaacagcagatgcaacgacaacaacaacaacagcaa cagcaacaacaacagcagatggcaggcggtgccgttaacggaggtcagcctggccgtgcc cccggaccccagcagacagacggtgtctctggagctcagattccaaagacgcctgctgct aagcctgtcggtatgccaactggccagccacaaggaggtgttccctacacaaaggctcag attcagttgctcaaggatcaaataaaggctttccaagcgctaagtcggaaccagggcgtc ccagctgcccttcaaaaacaactttacgagttcagggctcggcgcaactctgctcaggtt gcgcaagcggtatccaatgcgtctgctgctcagactaactccagtacaccaacccaagac acccccaagaccggcagctccaacggtcaggaggaggctgattcaacaccaaaggcgcgt gagctcaagacagtcaagctgccactagaagccggactggtcaaaaacagcatcaactac ctcgagcatgggcgccgcaagaatcgccttatcatccctggcatttttcccacgggtgtc gatttcgagcagttgagagcagaccgtgagaagattgtgttcaatcgcatgagcgcccgc tatgccgagctcaagagcctcccgggtaacctggcgcattgggacacaagtaaagatgaa gtcgtcgccgatgacacggctaagcgcaaggccattatcgagatgaagaagctggctttg tactccaaacagcgagcgctgagggataaggtcgggaaacaaatgctacactatgataac cttgcgatgacgacaaataggacaatgtaccgccgcatgaagaagcagagtgttagggaa gcccgggttaccgagaagcttgagaagcagcaacgtgacgcgcgcgagaatagagaacgc aagaagcacgtcgagtttctgcaagcggttcaaaaccacaaggtggagatacaaaacgtc gcctcaattcagcgtaacaagctacagaagatgggtcgtctcatgtatgcgcatcacttc aacatcgagaaagaggagcaaaagagggtggaaaggacggccaagcagcgtctgcaggcc ctcaaggccaacgacgaagaagcttatctcaagctgctcgaccaggccaaggatactcgt attactcaccttctccgccagactgacggtttccttcatcagctcgcctcatcggttcgt gcacaacagcgcgaggccgccgagcgttatggcgacgatttgcaaaacatcccagaagag gagagcgatgtggacgaggacgaagaaagtagccggaagatcgactactatgccgttgcg cacagaatcaaggaagaggtcacagaacaagccagtattctggtcggtggcactctcaag gagtaccagctcaagggtctgcagtggatgttgtcgctctacaacaacaacctcaacggt atcttggccgacgaaatgggtctcggaaagactattcagacaatcagtttggtcacatat ctcatcgagaaaaagcagcagaatggaccgtacctggttattgttccgctcagtacgctc accaactggaaccttgaattcgataagtgggcgccatccgttgccaagatcgtctacaaa ggtcctcccaacacccgcaagctgcagcaggagaagatccgccgtggggaattccaggtc ttgcttacgacatacgagtacatcatcaaggatcgcccgctgttgagcaagatcaagtgg ttccacatgatcattgatgaaggacatcgtatgaagaacgctaactcgaagctgagcgcc accatccagcaattctacagcacccgattccgcttaattctcacgggtactcccttgcaa aacaaccttgccgagctgtggtccatgctcaacttcgtcctgccgaacatcttcaaatca gccaagacctttgatgaatggttcaacactcctttcgccaacacgggtgggcaggacaag atggaactcacagaagaagagcagattctcgtcattcgtcgtctgcacaaagtgctgcgg ccattcttgctgcgtcgtctcaaaaaggatgtcgaaaaggatctgccagacaagacagaa aaggttatcaagtgcaagttttcggccctgcagcaacgtctgtacaagcaaatggttacc caccaaaagattcttgtcagcgacggaaagggaggcaagactggtgcccgtggtttgagc aatatgatcatgcagctccgcaagctctgcaaccatccatttgtgtttgacgaagtcgag aaccaaatgaacccgaccaacaccagcaacgacctgctgtggagaacagccggtaagttt gagcttctggaccgtgtgctgcccaagtataaggcaacgggccatcgtgtcctgatgttc ttccaaatgaccgctattatggacattatggaggatttcctcaggttccgtggcattcag tacctccgtcttgacggtacaaccaaggcggaggaccgttccgagctcttgaggctcttc aacgcccctgactcaccttacttcatgttccttctctctacccgtgccggtggtttgggt ctcaacttgcagactgccgatacagtcatcatttacgattcggattggaaccctcatcag gatttgcaggctcaggatcgtgctcaccgtatcggtcagaagaacgaagtgcgtatcctg cgtctcatcagttcggcctcggttgaagaaaagatcttggaacgtgccagattcaagctc gatatggacggcaaagttattcaagccggtcgtttcgataacaaatcgtccgaaaccgat cgtgatgccatgctcaggactttgcttgagacggcagacatggcggaggttggtgagcag gaagagatggatgacgaggaactcaacatgattttggcccgtaacgaagatgagttggtc acgttccagcagcttgacgatgaaagagctcgcgatccgctctatggtacggcgccggga tgtaagggtatccctcgcctcatggctgagaaggaactgcctgatatctaccttcaagaa ggcaatccgattgaggaagaagaagcggtctctctcggtcgtggagctcgtgagcgcaca aaggtcaagtacgacgatggtcttacagaagagcagtggctcatggcagttgacgatgac gatgattcgccggaggctgcggcggcccgcaaggcggcacgtaaggaacgccgtgaacaa aacaggctcaagaagatggcaatcctcaacaatgcttccggttccgtggatgcctcacca agtgtaagtcgggctagtactgaggaggtggaggtcgccccgccgacgcccaaaaagcgt ggtcgtaagcctggcagcaagaatctcgaaaagcgccctagggaggatggtgatgatgaa cctcctgtcaccaagaagcgtcgcggacctggtggccggcccaaggcggtgtcgaacgga gacagtcgcatgtcagcagaaatgcgcactaagctgcagcagagcatgaggcggatcttt gatgggttgatgaaccttgaagtggaggatgatgagcctgccgagcagctagatggtgac aaggacgaagacgaaggcccacccaccaggctgatcattggtcctttcgtcaagctgccg cctaagcgtgaatggccggattactacctcatgattacgaacccgatttgcatgaaggac atcgaaaagaagatgaagaaggaggactaccactcactttcggatatgcggaaagatttg gagttgttggtgaggaactgcaggacgttcaacgaggagacatccatgatttgcatagat gcaaacaggatagaggctcacttcaaggatcaattcgagaaggagctgaacgatcacccc gaactccgcaccctcgaggacccctcctcctcaaccttctccgtcggagcatcctcaaca aaggacggctcagtcgccccatccaccatcaccaacttcactgagactccgcaaccatcg tcggcacctcccgtgctagcgccagcaccgacccaaccgaccaggatcaagctcgtgtcc agttcaacgtcttacaacaacgccgcttcctcgtccagcgcaatgacatcagccgtgaac agcatgagcgtcagccaggtgatgaacggtaccagcgcggcggacagcgaagccggagat gaagattag

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