Neurospora crassa: NCU06585
Help
Entry
NCU06585 CDS
T01034
Name
(RefSeq) Rad4 family protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ncr
Neurospora crassa
Pathway
ncr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCU06585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU06585
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
NCU06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
3878093
NCBI-ProteinID:
XP_961945
UniProt:
Q7S8M9
LinkDB
All DBs
Position
IV:complement(1722162..1725912)
Genome browser
AA seq
1040 aa
AA seq
DB search
MPPYVPRKRVRDESPPPANDLKNDAKRRKGKENLNAAKLSAPPRKPTLFDALDATASPAS
SSKTSLAALALDESSDDDSSSLSSLSDGDFEDVPVLKKQKHNVQVGEDEDEDDDEDLEFE
DVEPYQPQSTTANVPEVPAGDLELTLIRDTRISLANALGKKGPSKLERRIRVSTHCVHVQ
LLLWHNAVRNAWLCDPEVQGILLSHLPPKLWDEVDRWRRNSGLEVVVPDGGGTEASTKKK
SPAQKKTRAQVKGKAQAKGKDAAKADRSRDWGQAAKHLEKGAVDMSHGDPLFRLMKVLSA
WWKQRFRTTAPGLRKWGYMTLERLDRLTKAFNQEEHQPERFGERIASLEDFRECASECAG
SRDVGAQLFTAMLRALGLEARLVASLQPLGFGWTKVEEADPEKEEDLKPTPKKNMGATSM
AKETVTTHASGRSTRRGASRKATKIQRSNSELIAADSDDDLVISDHEPEPTPRMKNKVYD
KDLEFPHYWTEVLSPVTKKYLPVDPIVKSIIGTNRELIESLEPRGSKADKAKQVMAYVMG
YSPDGTAKDVTVRYLKRQTLPGRTKGMRIPMEKVPVYNKHGKVARYEMYDWFQTVMKGYA
RGGRSKPAMTDVDLEENATDLKPAKPEKKEVKEGQETLQYYKQSKEFVLERHLKREEALL
PNARPVKMFRNKGSSGGSSKKAATTTAATQDEPVYSRKDVVHVKSAETWHKQGRAPLPGE
QPLKRVPYRAATNNRRREIAEAERLTGQKVLQGLYSFDQTDWIIPPPIENGVIPKNEYGN
IDLFAEHMCPQGAVHVPYRGAMRVCKRLGIDYAEAVVDFEFGNRMAVPVVQGVVIAEEHH
DQVMEEVAKDEAEKKRKEDEKRRKAALGMWRKLLMGMRIVERIKQDYGHVGDEVEVFGRH
GSGGADIRELSDAEAEMGEDEETGGGGFLPEGFEVEDEERDSHLRSSFFPVVDEDDEDGE
DTLEVDHGEGEGNGDQAERKKESAVMSTKPKRKAAAAKAKASIPGSRRRTRRNVPSSEDE
DEEEDEDSELSDLEDDEEDF
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcctccatatgtaccccgcaagcgagtccgggatgaatccccgcctccagccaacgac
ctgaaaaacgatgcaaagcgaagaaaaggaaaagagaacctcaacgccgccaaattgtct
gctccacctcggaagccgactctctttgacgccctcgacgcaaccgccagtcccgcttca
tcttccaagaccagcctcgcagccttggcgctcgacgagagctccgatgacgactccagt
tctctctcatccttgtccgatggcgactttgaagacgttccggtcctcaagaaacaaaaa
cacaatgttcaagtaggcgaggacgaagacgaggatgacgacgaagatcttgaatttgaa
gacgtcgaaccctaccagccccaatcaaccacagcaaacgttcccgaagtacccgctggc
gacctcgaactgactttgatccgggacacgcgcatatccctcgccaacgcactagggaag
aaaggaccgtccaagctagagcggaggatacgcgtctcgactcattgtgtgcacgtgcag
ttgcttctctggcacaacgctgttcgtaatgcgtggctgtgcgacccagaggtgcaagga
attcttttgtcgcatctccctccgaaactttgggatgaggtggatagatggaggcggaat
agtgggttggaggtggtggtacctgatggaggtggtactgaggcttcgactaagaagaag
tcacccgcccagaagaagacgagggcgcaagtgaaaggaaaggcgcaggcgaaagggaaa
gatgctgccaaagcggacaggtcgcgcgactggggtcaagcagcgaaacatcttgaaaag
ggcgcggtagatatgagccatggcgatccactgtttcggttgatgaaagtcctcagcgcg
tggtggaagcagcggtttcggaccacggcaccggggctacggaaatgggggtacatgacg
ttggagaggttggatcgcctgacgaaagccttcaaccaggaggagcatcaaccggaacga
tttggagagcgaatcgcctctttggaagactttcgcgagtgtgcttcggaatgcgctggg
agtcgtgatgttggcgctcaactgttcacagcaatgttgagggcactggggttggaggct
aggttggtagctagtctccagcccttagggttcggctggactaaagtggaagaggcagat
ccggagaaggaagaagatctcaaaccgacccctaaaaagaacatgggagccacgagtatg
gccaaggagaccgttacaactcatgcatcagggagatctacaagacgaggcgcgagccgt
aaggcaacgaagattcaaaggtctaactcggagcttatagcagcagacagtgacgacgat
ctagtcattagtgatcacgagcccgaaccaacaccgcgaatgaagaacaaagtctacgac
aaggacctggagttcccccattactggaccgaggttctctccccagtcaccaagaagtac
ctaccagttgaccccatcgtgaaatccatcattggaacgaatagggagttgattgagtct
ctggagccacgtggtagcaaagcggacaaggccaagcaggtcatggcctacgtcatgggt
tactcgccagacggcacagcaaaggatgtcacagtgcgctacctcaagcggcaaaccttg
cctgggcgcacaaaaggcatgaggattcccatggagaaagttcccgtttacaacaagcac
ggcaaggtagcaaggtacgaaatgtacgactggttccagaccgtgatgaaaggctacgct
cgaggcggcaggagcaagcccgccatgaccgacgtcgatctagaagaaaacgcgacggac
ctgaagccagccaagcccgagaagaaggaagtcaaagagggccaagagactctacagtac
tacaagcaatccaaagagtttgtcctcgagcgacacctcaagcgcgaggaagcactcctg
cccaacgcgcgaccagtcaagatgttcaggaacaaaggcagcagcggcggcagcagcaaa
aaagcggcgaccaccacggccgccacccaagacgagcccgtctactcccgcaaggacgta
gtccacgtcaagagcgccgaaacttggcacaagcaagggcgagctccccttcccggtgag
caaccgctcaagcgcgtcccttaccgagcagcaacgaacaaccggcgacgagagattgcg
gaagccgaacggcttacaggccagaaggtgctgcagggattatacagcttcgaccaaacg
gattggatcatcccgccgcccatcgagaacggcgtcatccccaagaacgagtacggcaac
attgatttatttgctgagcacatgtgccctcagggagcggtgcacgtgccataccgcggc
gcgatgcgtgtgtgcaagcggttgggcatcgactacgcggaggcggtggtggactttgag
tttggaaacagaatggcggtgccggtggttcagggggttgttattgccgaggagcatcat
gatcaggtgatggaggaggtggccaaggatgaggcggagaagaagaggaaggaggatgag
aagcgacggaaggcggcgttgggaatgtggaggaagcttttgatggggatgcgaattgtc
gagagaatcaagcaggattatgggcatgtgggtgatgaggtggaggtctttgggaggcat
ggaagcggaggggcggatattcgggagttatccgacgccgaagcggaaatgggtgaagat
gaggaaacgggcggcggtgggtttttgcccgaaggctttgaggtggaggatgaagaaagg
gatagccatctaaggtcctctttcttcccggtggtagatgaggatgatgaggatggggag
gatacacttgaggtggatcatggcgagggagagggcaacggggaccaagcggaaaggaag
aaagagtccgcggtgatgagtacgaaacccaagcgcaaggcggctgctgccaaggcgaag
gcgagtattccaggttcgcgaaggagaacgaggcgcaatgtcccttcaagtgaggatgag
gacgaggaggaagatgaagattcggaattgtcagatttggaggatgatgaagaggatttc
tga
DBGET
integrated database retrieval system
