Neurospora crassa: NCU06605
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Entry
NCU06605 CDS
T01034
Symbol
dim-8
Name
(RefSeq) defective in methylation-8
KO
K10610
DNA damage-binding protein 1
Organism
ncr
Neurospora crassa
Pathway
ncr03420
Nucleotide excision repair
ncr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
NCU06605 (dim-8)
09124 Replication and repair
03420 Nucleotide excision repair
NCU06605 (dim-8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncr04121
]
NCU06605 (dim-8)
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU06605 (dim-8)
Ubiquitin system [BR:
ncr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
NCU06605 (dim-8)
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
NCU06605 (dim-8)
TCR (transcription coupled repair) factors
Cul4-CSA complex
NCU06605 (dim-8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
3878495
NCBI-ProteinID:
XP_962347
UniProt:
Q7S9R0
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All DBs
Position
IV:1782124..1786149
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AA seq
1158 aa
AA seq
DB search
MAYVAPIHRPSSVRHALRINLLSPEEESLIIAKTNRIEIWKLADGHLSMIHSKVINGTIT
ILQKLQPKDHPTDLLFVGTDQFEYFTAEWDRETQQLKTLNRFSDPGERHMRDSQSQNKCI
VDPSGRFMAMHLWEGVLSVWRLGNRKNTATTLDILVQVRLSELFIKGSTFLYTETGIPKV
AFLYRNQANSNETKLATYRLTSDDRHTEISKFDPTRDREIDADVEDPGAGILIPVKKVEE
EVKRHHFRNTEQAKPHVGGLIVVGETRLLYIDEVTKTQVESALREPSIFVAWAEYDPTHY
FLSDDYGNLHLLTILTEGAVVTGMDVSNIGKTARAHVLTYLGDDMLFVGSHYGNSQLYRL
NLLSEDLSEILQLVQVLENIGPVTDFTVMDMGNRENDSQLGNEYSSGQARIVTASGVFKD
GTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNSPRVDTLVASFLTDTRIFKFDPHGEI
EEVDNYYGMDLQHQTLLATNLDNGQLLQVTTAAATLLDAESGVTIASWAPEGDRQIINAS
ANKHWLLLSVQGTTLVSINIDNDLTVVQEKDISEQDQIACIHVAPQLSDVGVVGFWTSGT
VSIIDMSTLEPIHGESLRRSADDASIPRDLVLAKVLPNAPGMTLFIAMEDGNVVTFNIGE
DLTFSGRKSVILGTREARFHLLPQQDGIYSIFATTEHPSLIYGSEGRIIYSAVTAEDATC
VCPFDSEAFPGAVILSTENEIRISEIDTARQTHVRSLELGEMVRRIAYSPSEKGFGLGCI
RREVVNGEEIIHSSFKLVDEILFARVGKEFMLGTSSYSELVEDVIRAELPDSYGNLVERF
IVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELKGGCRALAVMGSKIVAALH
KTVVISQYEETSSTEAHLVKLASYRCTTYPVDIAVHGNMIAVADMMKSATLVEYVPAKTG
GEKSEAPKLVECARHRHSAWATAVAHVEGESWLEADANGNLIVLQRNAEGVTVEDQRQLR
ITSELNLGEQVNKIRPIKVETSPNAIIIPRAFLATAEGGIYMFGTIAREQDLLLRFQDKL
AAVIKTVGELDFNSYRAFRNAERGPEADGTTGPVRFLDGELLERFLDVDEKTQKEICEGL
GPSVEQMRNMVEELRRMH
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggcctacgtcgccccgattcaccggccgagcagcgtgcggcacgctctgcgtatcaac
cttttgtcgcccgaggaggagagcttgattatcgcgaaaacaaatcgcatcgaaatatgg
aagcttgccgacggtcatctgtccatgatccattccaaggttatcaacgggaccatcacg
attctccaaaagctccagcctaaagaccacccgaccgacctcctcttcgttggcaccgat
cagttcgaatactttacggcagaatgggatcgcgaaacccaacagctaaaaaccctgaac
cgattcagcgatccgggcgagcgccacatgcgcgattcccaaagtcaaaacaaatgcatc
gtcgatcccagcggaaggttcatggccatgcacctatgggaaggggtcttgtcggtttgg
cggctgggtaaccgcaagaacacggcgacgacacttgacatattggtacaagtgcgcctg
tccgagctcttcatcaagggcagcaccttcctgtacaccgagaccggcattcccaaggtt
gccttcctctaccggaatcaagccaactccaacgaaaccaagctggcgacgtaccgtctc
acgtcggacgaccggcacacagagatttccaagtttgatcccacgagagaccgagagatc
gacgctgatgtggaagatcccggtgcgggcatactgattccggtcaaaaaggttgaagag
gaggtcaagaggcaccatttccgtaatacggagcaagcgaagccccatgtcggtggtcta
atagttgttggcgaaacgcggttgctgtacattgacgaagtgaccaaaacgcaggtcgag
tccgccctcagggaaccctcgatatttgtcgcttgggcagagtacgatcctactcactac
ttcttatcggatgactacggaaacttacatttgctcaccatcttgacggagggcgcagtg
gtcactggaatggatgtctccaacattggaaagacagcccgcgcacacgtcttgacgtac
ttgggcgacgacatgttgtttgtcggttcgcactacggcaattcacagctttatcggctc
aaccttctaagcgaggatctcagtgaaatcctgcaactggtccaggtgctagagaatatc
ggtcctgttacggatttcaccgtgatggacatgggcaatcgggaaaacgacagccagctg
ggcaatgagtactcttctggccaagcccgtattgtcacagcaagtggtgtcttcaaggac
ggaaccttgcgaagtgtgcgaagcggtgttggtttacaggacattgcaatcctgggtgaa
ctgcagcacactcgggcgctcttctccctccagtcttacaactctccacgcgtggatacg
ctggtcgcgtccttcttgacggatacccgaatattcaagttcgaccctcacggagagatc
gaggaagttgacaattactacgggatggacctacagcatcaaacactactggcgacgaac
ctcgacaatgggcaactgcttcaggtgacgacggccgcggctactcttcttgacgctgaa
agcggagtcacgatagcatcgtgggctcctgaaggcgacaggcagatcatcaacgcttca
gctaacaaacactggctgctcttgtctgtgcaaggcactaccctggtctccatcaacatt
gataacgacttgacggttgtgcaagagaaggacatcagtgaacaggatcagatagcctgc
atccacgtggcgcctcagctatcggatgtgggcgtggtggggttttggacgtccggaacg
gtgtccattatcgatatgagcaccctggaaccgatacacggcgaatcactccgccgcagc
gcagacgatgcttccataccgcgtgatctcgtcttggccaaggtgcttcccaatgcgcct
ggaatgaccttgttcattgccatggaggatggaaatgtagtcacgttcaacattggcgaa
gacctgaccttttctggacggaagagtgtcatccttggtaccagggaggcgcgcttccat
ttactgccacagcaggatgggatctacagcatcttcgcgacgactgagcaccccagtctt
atctacggctcagaagggcggattatctactcggctgtgacggctgaggacgctacctgt
gtctgtccctttgactctgaggctttcccaggggctgtcattttgtctaccgagaacgag
atcaggatttccgagattgacacagccagacagacgcacgtgcgatctttggaattggga
gagatggtgcgtagaatcgcctactcgcctagtgaaaagggtttcggactcggatgtatc
aggagagaggtagtcaatggcgaggagatcattcacagctcttttaagctggttgatgag
atcttatttgcgagggttggcaaggagttcatgctcggaacatcgtcgtactccgaacta
gtggaggacgtcatccgagcagagctgcctgactcttatggaaatcttgtggagaggttt
atcgtcggtacaagcttcctggaggatcctgaccgtggcgctggtacggacaagcgcggt
aggatcttggtgttcgggatcgacagcaaccgggatccgtacttggtcctcaagcacgag
ctgaaaggcggctgtcgcgctctggcggtcatgggcagcaaaatcgtggctgcactccac
aagacagtggttatcagccagtacgaggaaacgtcaagcactgaggcccatctcgtcaag
ctcgcgtcttatcggtgcacaacttatccggtcgacatcgcggtgcatggcaacatgatt
gctgttgctgatatgatgaagtcggctacactggtcgagtacgtcccggccaaaaccgga
ggggagaagtccgaagcccccaagttggtagagtgcgcgagacacaggcattctgcgtgg
gcaacggccgtggctcacgttgagggcgagtcttggcttgaagctgatgccaatggcaat
ctgatcgtgcttcaacgcaatgctgagggcgtgacagtggaggaccagcggcaactgagg
ataacaagcgagctcaacctgggagaacaggtgaacaaaatacgcccgatcaaggtcgag
actagcccgaacgccatcatcattcctcgagcgttcttggccacggcggaaggcggtatt
tacatgtttggtacgattgcgcgcgaacaagacctcttacttcggttccaggataaactg
gcggcggtgatcaagacagttggcgaactcgatttcaactcctacagggcattccgcaat
gcggaaagggggcccgaggcagatggaacgactgggccggtcaggttcctggatggggag
ttgctggagaggtttttggatgtggatgagaagacgcagaaggagatctgcgaaggtctt
gggccgagcgttgagcagatgcgcaatatggtagaggagctacggaggatgcactga
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integrated database retrieval system