Neurospora crassa: NCU06679
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Entry
NCU06679 CDS
T01034
Symbol
cac-3
Name
(RefSeq) chromatin assembly-3
KO
K10752
histone-binding protein RBBP4
Organism
ncr
Neurospora crassa
Pathway
ncr03082
ATP-dependent chromatin remodeling
ncr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NCU06679 (cac-3)
03083 Polycomb repressive complex
NCU06679 (cac-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU06679 (cac-3)
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
NCU06679 (cac-3)
Histone modification proteins
HAT complexes
HATB complex
NCU06679 (cac-3)
HDAC complexes
Sin3A-HDAC complex
NCU06679 (cac-3)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
NCU06679 (cac-3)
PRC2.2
NCU06679 (cac-3)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
NCU06679 (cac-3)
Heterochromatin formation proteins
Other heterochromatin formation proteins
NCU06679 (cac-3)
Chromatin remodeling factors
NuRD complex
NCU06679 (cac-3)
NuRF complex
NCU06679 (cac-3)
NuRF complex (fruit fly)
NCU06679 (cac-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_DCAF4
SGL
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
3877141
NCBI-ProteinID:
XP_960994
UniProt:
Q7S7N3
LinkDB
All DBs
Position
V:4249520..4252204
Genome browser
AA seq
446 aa
AA seq
DB search
MARDEIVDDVDVNMEEDDAEAEQRLINEEYKIWKKNSPFLYDMMLSTALEWPTLTTQWFP
DVKNPKDKSHTVHRLLLGTHTAEGKPNYLQIAEVEIPKMVELNPRDYDEERGEIGGYGSK
ASSGEPLCIRFKITQKIDHPGEVNKARYQPQNPDIIATLAVDGRVLIFDRTKHSITPSGT
PSPQLELIGHKEEGFGLNWNPHEEGCLVTGSEDKTVLLWDLKTYEGTSKQLKYSRKYTHH
SHIVNDVQHHPLVKSWIGTVSDDLTLQIIDVRRPETDKAAIVARNGHSDAINALAFNPRV
ETIIATASADKTIGIWDMRNMKSKVHTLEGHQDAVTSLEWHPTESAILGSGSYDRRLLFW
DISRVGDEQTQDDAEDGPPELLFMHGGHTNHLADFSWNRNDPWLVCSAAEDNLLQIWKVA
NSIVSKEPADMSTPELDDPKPKQSSH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgacgagattgtcgacgatgttgacgtcaacatggaggaggacgacgccgag
gccgagcagcgcctgatcaacgaagagtacaaaatctggaagaagaacagccccttcctc
tacgacatgatgctcagcacggccttggagtggcctaccctcacgacacaatggtttccc
gatgtcaagaaccccaaagacaagagccacaccgtccacagactgcttctcggaacccat
actgctgagggcaagcccaactacctccagatcgccgaagtcgagatccctaagatggtc
gagctgaatccccgcgactacgacgaggaacgtggcgagattggtggctatggcagcaag
gcctcttccggggagcccttgtgcattcgcttcaaaatcacccagaagatcgaccacccc
ggcgaggtcaacaaggcccgttaccagccccaaaaccccgatattatcgccaccctcgct
gttgacggccgtgtcctgatcttcgaccgtacaaagcacagcatcacgccttccggcact
cctagccctcaacttgagctgattggccacaaggaagaaggcttcggcttgaactggaat
ccgcacgaggaaggctgccttgtgactggcagcgaagacaagaccgtcctcctgtgggac
ctcaagacctatgaagggaccagcaagcagctcaagtactctcgcaagtacacgcaccat
agccacatcgtcaacgacgttcaacaccaccccttggtcaagtcatggatcggcaccgtc
tcggacgatctcactctccagatcatcgacgtccgccgtccagagaccgacaaggcagcc
attgtcgcccgtaacggccatagtgacgccatcaatgctttggcgttcaacccacgggtg
gaaaccatcattgcgactgcgtccgccgacaagacgattggtatttgggacatgaggaac
atgaagtccaaggttcacaccttggagggccaccaggatgcggtcacctctcttgagtgg
cacccaactgagtcggccattctgggcagtggcagctacgacaggagattgctgttttgg
gacatcagccgtgtcggagacgagcagacccaagatgacgctgaggatggccccccggag
ctgctcttcatgcacggcggccacaccaaccacctagccgatttcagctggaaccgcaac
gacccctggcttgtgtgcagtgctgctgaagataacctgctccagatctggaaggtggcc
aacagcatcgtttccaaggagcccgctgacatgtctactcccgaactcgatgaccccaaa
ccgaagcaatctagtcactag
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integrated database retrieval system
