Neurospora crassa: NCU06889
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Entry
NCU06889 CDS
T01034
Name
(RefSeq) hypothetical protein
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ncr
Neurospora crassa
Pathway
ncr03020
RNA polymerase
ncr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCU06889
09124 Replication and repair
03420 Nucleotide excision repair
NCU06889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncr03021
]
NCU06889
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU06889
Enzymes [BR:
ncr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCU06889
Transcription machinery [BR:
ncr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NCU06889
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NCU06889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
3875408
NCBI-ProteinID:
XP_959236
UniProt:
Q7S3G4
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Position
VII:complement(673843..675441)
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AA seq
532 aa
AA seq
DB search
MASTSCIEPLASPDWVSRSRSPENWGPTSLGPVPFSPPYIPRSLESTPGSTSPADYLYYP
TSPGPVPPSPPYIPQSPESVPGSVSPEGNYYPTSPGPGPQSPAYLPRSSEWVSTSPPSSI
LGPTSPPPVLRSPACAYTPYSPQSVSRGTSPTYYYPTSPGPVPPSPPYIPRSPVWAFRDT
SPDEYHPTSPGPGPQTPAYTPSSPQWVSGGMSPTNYYPTSPGPVPPSPPYIPRSPEWWST
SSTPVPQSPADIPTSPQSGYRGTSSEKYYPTSPGPVPPSPPYVPQSPHWASTSPTPVPLS
PLSPAATDPFNKLERELDGSWGRGRFVCNRARSIVAEEEEEQRQRGERETTIEPFPELPY
WEEDESTGRETEDDVQDIIVREPAAAVPEEEEGGLPDYQYYEQLDQDTAAETLIRMETEH
SVVDNPYTAIAALNCEPQSNPFPSYPSSEIGMHQDAREEHANWFSSSSSSFRSSSAINNP
ACLVPQKLMGCVKVQKRIDRMMWNKLMQKKMVRMMEACEKYVPADVLRGLKQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacatcttgtatcgaaccccttgcatctcccgattgggtttccagaagtcga
tctccagaaaattggggtcccacatcgcttgggcctgtccctttctccccgccgtacatt
cctcgatctcttgagtcgactcctggaagtacctctccggcagactacctctactatcct
acatctcctggaccagtcccgccgtctccgccttacatcccccaatctcccgagtcggtt
cctggaagtgtgtctccggaagggaactactatcctacgtcgcctgggccaggaccccaa
tctccggcataccttcctcgatcttctgagtgggtatctacctcgccgccttcgtcaatc
ctcggtcccacatcccctccgccagtactccgatctccggcatgtgcatacacaccttat
tctcctcagtcggtttccagaggcacatctccgacatactactatcctacatcacctggt
ccggtgcccccgtctccgccgtacatcccccgttctcctgtgtgggcattcagagacaca
tctccggatgaataccatcctacatcgcctgggccaggacctcaaactccggcctatacc
ccttcatctcctcaatgggtttccggaggtatgtctcccacgaactactatcccacgtcg
cccgggcccgtgccgccgtccccgccatatatccctcgatctcccgagtggtggtctaca
tcgtcgactccagtaccccaatctccggcggacatccctacttctcctcagtcgggttac
agaggcacatcttccgagaagtattatcctacatcgcctgggcctgtccccccgtcgccg
ccatacgtccctcaatctccccattgggcctctacatctccaacccctgttccgttgtcg
cccttatccccggccgccaccgaccccttcaataagcttgagcgtgaacttgacggctct
tggggcaggggccgcttcgtttgcaaccgggcgaggtcgatcgtcgcagaggaagaagaa
gagcagaggcagcgcggcgagcgcgagacaacaatcgagcctttccccgagcttccgtac
tgggaagaggacgagagcacagggagggaaacagaggatgatgtccaagatatcattgta
cgtgaacctgctgctgctgtcccggaggaggaggaggggggactgcccgactaccagtac
tacgagcaactggaccaggatacggcggccgaaactctcattcggatggagacagaacat
tccgtcgtggacaatccctacactgccatcgccgctctcaactgcgagcctcagtccaac
ccttttccatcctacccgtcgtctgaaattggcatgcaccaagatgctagagaagagcac
gcaaactggttttcttcctcttcctcttccttccgcagctcctcagccatcaacaacccc
gcttgcctagttccccaaaagctgatgggttgtgtcaaggtccagaagaggattgacagg
atgatgtggaacaagctgatgcagaagaagatggttcgtatgatggaggcgtgcgagaag
tacgttcccgcggatgtgctgagggggttgaagcagtag
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