Neurospora crassa: NCU07289
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Entry
NCU07289 CDS
T01034
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ncr
Neurospora crassa
Pathway
ncr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCU07289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncr03021
]
NCU07289
Transcription machinery [BR:
ncr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NCU07289
Prokaryotic type
Archaeal type
TFB
NCU07289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4_2
Sigma70_r4
Trm112p
Motif
Other DBs
NCBI-GeneID:
3878292
NCBI-ProteinID:
XP_011394229
UniProt:
V5IMU9
LinkDB
All DBs
Position
IV:complement(4508624..4510918)
Genome browser
AA seq
348 aa
AA seq
DB search
MTDFIIPKPPQQEKFKENLQNLLMCPECKEDPPHLVEEFSSGDMVCGSCGLVLGERIIDT
RSEWRTFSNDDQGNDDPSRVGDGPNQLIDGDQLQTTIAFDGKNGKNLSHLQNKITQDKNS
KQLMQAYRDIQGLTDSINAGTQVANAAKHIYKLVEDNKALKGKSQEAITAGCIFIACRQT
GVPRTFREIYSLTKVSKKEIGRVFKQLESFLQKIGGEEHAITTSIPTFNQQYQGKGSTTA
TELCARYCSNLNFRNSVAVEDVARQLADKTSTISELAGRSPLSVAAACIYMASHIRNESR
TSKEIATVAGVSDGTVKTAYRLLYNKKDKLLEEIFPEGVPNLDKLPAN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcattattcccaagcctccgcaacaggagaagttcaaggagaatctccag
aatctcctcatgtgcccagagtgcaaggaagatccgcctcaccttgtcgaagagttctcg
tcaggagacatggtttgcggctcctgcggtcttgtgctgggcgagcgcatcatcgatacc
cgctctgagtggcgtactttctccaacgacgaccagggcaacgatgacccctctcgtgtt
ggtgatggtcccaaccagctgatcgatggtgaccagctccagaccactatcgcgttcgat
ggcaaaaacggcaagaacctgtcccaccttcagaacaagatcactcaggacaagaactcc
aagcagcttatgcaggcctatcgcgatatccagggcttgacggacagcatcaacgctggt
acccaggtggcaaatgctgccaagcacatttacaagctcgtcgaggacaacaaggccctc
aagggcaagtctcaggaagccatcaccgctgggtgcatcttcattgcatgccgccaaacg
ggagtgccgcgtacgttccgcgagatttacagcctgaccaaggtttcgaagaaggagatt
ggcagggttttcaagcagttggaatccttcctccagaagatcggaggcgaggagcatgca
atcacgaccagcatccccaccttcaaccagcaataccagggcaagggatctactacagct
accgagctttgcgctcgttactgcagcaacctcaatttccgcaactcagttgcggtcgag
gatgttgcccgccagttggccgacaagaccagcactatttcggagctggctggccgttct
cccctttccgtcgccgctgcgtgtatctacatggcatcccacatcaggaacgagtcacgt
acgtccaaggagattgcgacagtggctggtgtcagtgacggaaccgtcaaaacagcttat
cgtctcctctataacaagaaggacaagctgcttgaggagatcttccctgagggagtgcca
aacctcgacaagcttcctgcgaactag
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integrated database retrieval system
