Neurospora crassa: NCU07654
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Entry
NCU07654 CDS
T01034
Name
(RefSeq) pre-mRNA polyadenylation factor fip-1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ncr
Neurospora crassa
Pathway
ncr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCU07654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU07654
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NCU07654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
New_glue
Med13_C
Motif
Other DBs
NCBI-GeneID:
3878929
NCBI-ProteinID:
XP_962781
UniProt:
Q7SAX8
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All DBs
Position
IV:complement(415229..417232)
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AA seq
423 aa
AA seq
DB search
MDIDEDEDFYAPDEPQAAPPTTAATTTTPATTTTTAAPTTTTTTTSTTTASAPPTTTSSS
TKPEDELEEGEEEDEGGGAMDEDDDSDIDIITERKDGSAPPPPVQSRYSEIRNIPQRAAA
NDNGVKTAPVKKSDGTNSNSNSSSNKFGGGGGIGNEQKTRQGSGAAGGSGAELPPVRTSK
IEVDGIPVYKPVGKPITGVVIDEDLPENDKPWRKPGTDLSDYFNYGFDEFTWALYAQKQE
ALRGEYNAEAIAANNKKMMEEMTNMMMMGGMMPPGMGGPGGPGVGPAGPGAMGPGGPAGA
GGMGGPGGGLDGMPPEMQAMMQQMMGAAAAQGMDPSQMGQMGMAGGPGDMGGMGGMFGGP
GGGPGGPGTGGMGPGGPGGQGGQGQQFGGGFGGNQGQGGYGGYDQMGGAGGGGRGGRGRG
RRW
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgacgaagacgaggatttctacgctcccgacgagccccaggccgctccgccc
accacagccgcgaccaccacaacccccgccaccaccacaaccacagcagctcccaccacc
accactaccaccacatcaactaccacagcatcagcgccgcccaccaccacaagctcatca
acaaaacctgaagacgagcttgaggaaggcgaagaggaagatgaaggcggcggcgccatg
gacgaagacgacgactcggacattgacatcatcacggagcgcaaagacgggtccgcccct
cctccgcccgtccagagtcgctacagcgagatccgcaacattccgcagcgggcagcggcc
aacgataacggagttaagaccgcgcctgtgaagaagtcggatggtaccaacagcaatagc
aacagcagcagtaacaagttcggtggtggcggtggtattggaaacgaacaaaagacgaga
cagggaagtggtgcggcaggtggtagtggcgcagagctccctcctgtaaggacgtccaag
atcgaagtggatgggattccggtttacaaacctgttggcaagccgattacgggtgtggtt
attgatgaggacctccctgaaaacgacaaaccgtggcgcaaacccggcaccgacctctcc
gactacttcaactacggcttcgacgagttcacctgggccctgtacgcccagaaacaagaa
gcccttcgcggcgagtacaacgccgaagccatcgccgccaacaacaagaagatgatggag
gaaatgaccaacatgatgatgatgggcggcatgatgcctcccggcatgggcggtcccggt
ggccccggcgttggtccggccggcccgggtgccatgggtcctggtggtcctgctggtgct
ggtggcatgggcggaccgggcggtggtctggatggcatgccgcccgagatgcaggctatg
atgcagcagatgatgggcgccgcggcggcgcagggtatggatccgagccagatgggccag
atgggcatggcgggcggtccgggcgatatgggtggtatgggaggcatgtttggtggtcct
ggtggtggtccgggtggtccaggaactggaggtatgggtcctggcggtcctggtggacaa
ggtggtcagggacagcagtttggaggtgggtttggtggaaaccagggacagggtggttat
ggtggctatgaccagatgggtggtgcgggtggtggaggaaggggtggtaggggaagggga
agaaggtggtag
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