KEGG   Neurospora crassa: NCU07683
Entry
NCU07683          CDS       T01034                                 
Name
(RefSeq) small nuclear ribonucleoprotein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ncr  Neurospora crassa
Pathway
ncr03018  RNA degradation
ncr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCU07683
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCU07683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU07683
   03041 Spliceosome [BR:ncr03041]
    NCU07683
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NCU07683
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     NCU07683
Spliceosome [BR:ncr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    NCU07683
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 3878464
NCBI-ProteinID: XP_962325
UniProt: Q7S9L9
LinkDB
Position
IV:complement(2248158..2249692)
AA seq 130 aa
MLPLGILTAAQGHPMLVELKNGETLNGHLIQCDTWMNLTLREVVQTSPEGDKFVRLPEVY
VKGNNIKYLRVPDDVIDIAREQQHSQHGGHRGGRGGGQNRGDYGGRGGRGGRGGGDRGGH
RGGRGRGRGA
NT seq 393 nt   +upstreamnt  +downstreamnt
atgctaccgttaggcatcctcaccgcggcgcaaggccatcccatgctcgttgagctcaag
aacggcgaaacgctcaacggccacttgatccaatgcgatacatggatgaatctgacgcta
agggaggttgttcagaccagcccggaaggcgataagtttgtgaggttaccagaggtttac
gtcaagggaaacaacatcaaatatcttcgagtaccggacgacgtgatcgacattgcaagg
gagcagcaacacagtcaacacggtggacacagaggcggccgcggcggcggacagaacaga
ggcgattatggcggccgtggcggccgtggcggacgaggagggggcgacagaggtggtcac
aggggaggccgcggccgtggcaggggcgcatga

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