Neurospora crassa: NCU07683
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Entry
NCU07683 CDS
T01034
Name
(RefSeq) small nuclear ribonucleoprotein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ncr
Neurospora crassa
Pathway
ncr03018
RNA degradation
ncr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCU07683
09123 Folding, sorting and degradation
03018 RNA degradation
NCU07683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU07683
03041 Spliceosome [BR:
ncr03041
]
NCU07683
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCU07683
mRNA degradation factors
5'-3' decay
Lsm complex
NCU07683
Spliceosome [BR:
ncr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
NCU07683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
3878464
NCBI-ProteinID:
XP_962325
UniProt:
Q7S9L9
LinkDB
All DBs
Position
IV:complement(2248158..2249692)
Genome browser
AA seq
130 aa
AA seq
DB search
MLPLGILTAAQGHPMLVELKNGETLNGHLIQCDTWMNLTLREVVQTSPEGDKFVRLPEVY
VKGNNIKYLRVPDDVIDIAREQQHSQHGGHRGGRGGGQNRGDYGGRGGRGGRGGGDRGGH
RGGRGRGRGA
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgttaggcatcctcaccgcggcgcaaggccatcccatgctcgttgagctcaag
aacggcgaaacgctcaacggccacttgatccaatgcgatacatggatgaatctgacgcta
agggaggttgttcagaccagcccggaaggcgataagtttgtgaggttaccagaggtttac
gtcaagggaaacaacatcaaatatcttcgagtaccggacgacgtgatcgacattgcaagg
gagcagcaacacagtcaacacggtggacacagaggcggccgcggcggcggacagaacaga
ggcgattatggcggccgtggcggccgtggcggacgaggagggggcgacagaggtggtcac
aggggaggccgcggccgtggcaggggcgcatga
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