Neurospora crassa: NCU07832
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Entry
NCU07832 CDS
T01034
Name
(RefSeq) pre-mRNA processing splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ncr
Neurospora crassa
Pathway
ncr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCU07832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncr03041
]
NCU07832
Spliceosome [BR:
ncr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NCU07832
Complex C
U5 SnRNP specific factors
NCU07832
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
3879101
NCBI-ProteinID:
XP_962953
UniProt:
Q7SBD3
LinkDB
All DBs
Position
III:1007087..1015086
Genome browser
AA seq
2374 aa
AA seq
DB search
MSYPPPPPPPPGWGAPPPPSAPPPPPPPSSLPPPPALPAPPPPGFFPPTDPHVAKFAQKK
KEWLRMQRNRFGEKRKGGFVETEKADMPPEHLRKIVKDIGDVSQKKYTSDKRSYLGALKF
MPHAVLKLLENMPMPWEAAREVKVLYHVNGCLTLVNEIPRVIEPVFFAQWASMWTVMRKE
KSDRRLFKRMRFPPFDDEEPPLSWSENIEDVEPLEPIQMELDEDEEAAIYEWFYDHKPLL
DTPHVNGPSYKKWNLTLPQMASLYRLSRPLVSEVVDKNYYYLFELKSFLTAKALNAALPG
GPRFEPLYKDIDPNDEDFGEFNAMDRIIFRNPIRTECRVAYPHLYNALPRSVQLSVHSYP
QVVYTRTEDYNLPAFYFDTSINPISSRAVAPKNLTVSHEDEIFGPGNIEEPEEDAFELPA
GVESFMAEESLYTDETASAIELWWAPFPFDRRSGRTVRAQDVPLVKHWYLEHCPPKQPVK
VRVSYQKLLKNYVLNELHKKHPKSLQKQNLLRTLKQTKFFQQTTIDWVEAGLQVCRQGFN
MLNLLIHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQV
QYRLGNIDAFQLADGILYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNAGPVG
KGPGCGFWAPAWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFD
LELRASVMADLLDMMPEGIKQSKVNTVLQHLSEAWRCWKSNIPWKVPGLPAAIENIILRY
VKSKADWWISVAHYNRERIRRGATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVS
SEEAVAIYTTTVHWLESRKFSPIPFPSVSYKHDTKILILALERLREAYSTKGRLNQSQRE
ELALIEQAYDSPGTTLERIKRFLLTQRAFKEVGIDMNDNYSTINPVYDIEPIEKISDAYL
DQYLWYQADQRHLFPAWIKPSDSEVPPLLVYKWAQGINNLDRVWETANGECNVMIETQLS
KVYEKIELTLLNSLLRLIMDHNLADYITAKNNVTLTYKDMNHVNSYGMIRGLQFSAFVFQ
YYGLILDLLLLGPQRASEIAGPPHAPNDFLQFKDRETETRHPIRLYTRYIDKIWVFLRFT
ADESRDLIQRFLTEQPDPNFENVIGYKSKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLP
RSVTTIEWEDTFASVYSRDNPNLLFSMCGFEVRILPKIRNQNDEFPVKDSVWSLVDNTTK
ERTAHAFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTV
NLLDTIVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPTSDKRW
SKQTDLGVTHYRAGMSHDEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRLEANQQNRR
LTLEDLEDSWDRGLPRINTLFQKDRSTLSFDKGFRARSEFKIYQLMKSNPFWWTSQRHDG
KLWNLNAYRTDVIQALGGVETILEHTLFKATGFPSWEGLFWEKASGFEESMKFKKLTNAQ
RSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLW
QKIHESVVMDLCQVFDQELEALSIESVQKETIHPRKSYKMNSSCADIQLFASHKWNVTRP
SLLFDTKDVIESTTTNKFWIDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSLYPSPTGLM
IGIDLAYNLYSAYGQYFPGLKLLIQQAMGKIMKANPALYVLRERIRKGLQLYASESNQEF
LNSQNYSELFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKII
HTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVNLLDFPNI
SIRASELQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDEWLKSISSYTAFSRLILILRA
LHVNQDKTKLILRPDKTVITQDHHIWPSLSDEDWIKVETQLRDLILNDYGKKNNVNVSSL
TSSEVRDIILGMEISAPSLQRQQAAEIEKQQQEQQQLTAVTTKTQNVHGEEIIVTTTSQF
EQQTFASKTEWRTRAIATSNLRTRANNMYVSPVDSDLDDVTYVMPKNILKRFIAIADLRV
QVAGYLYGASPADNDQVKEIKCIVMVPQIGGLRNVQLPHQLPQHEYLKDMEPLGIIHTQS
GNELPYMSAMDVTEHARLLDAHPNWDKQNTLTVAVSFTPGSVSLSAWALTPQGFKWGVEN
KDIASDQPQGFTTSMGEKRQLLLSEKFRGFFLVPDGGKWNYSFMGSAFGGLEKKPVHVKL
DTPLPFYSDQHRPIHFSSFNELEDIWVDRQDNFA
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatccgccaccaccacctcctccccccggctggggcgctcctccgccgccatca
gcacctccgccgccgccgcctccgtcctctctcccacctcctcctgccctcccagcaccg
ccgccgcctgggttctttccaccaaccgaccctcatgttgccaagttcgcccagaagaag
aaggaatggcttcgcatgcagagaaatcgcttcggcgagaagaggaagggcggatttgtt
gagacggaaaaggccgacatgccaccagagcacttgcggaagatcgtcaaggatattggg
gatgtttcgcagaaaaagtacaccagtgacaagcgcagctatcttggggcgctcaagttc
atgccccatgctgtgctgaagctgctcgagaacatgcccatgccttgggaggctgccaga
gaggtcaaggttctctatcacgtcaacggctgtctgacccttgtgaatgagatcccgaga
gtcattgagcccgtcttctttgcacagtgggccagtatgtggacggtaatgcgcaaggaa
aagagcgaccgccggctattcaagcgcatgcgatttccacctttcgacgacgaagaaccg
cccctgtcctggtccgagaacatcgaggacgtcgagccacttgaacccattcagatggag
ttggatgaggacgaagaagcagcaatctatgagtggttctatgaccacaagccgcttctc
gacacgccccacgtcaacgggcccagttacaagaagtggaatctcaccctgccgcaaatg
gcgagtttataccgtctaagccgaccgttggtgtctgaggttgtcgacaagaactactac
tacctctttgagctcaagagtttcctcacagcaaaggccctgaatgcggctttaccaggc
gggcctcgcttcgagccactttacaaggacattgaccccaatgatgaggattttggcgag
ttcaatgctatggatcgcatcatcttcaggaaccctatccgaacagagtgccgtgtagct
tacccccatctttataatgcacttccgagaagcgtccagttgtcagtccactcatacccg
caagttgtctatacgcgcacagaagactacaaccttcccgctttttactttgacacgagc
atcaacccgatttcttcgcgggctgttgcccccaagaaccttacagtcagccatgaagat
gagatctttggacctggcaatatcgaggagccggaagaagatgcgtttgagctgcccgct
ggtgtcgagtctttcatggccgaggaatcgctgtatacggatgagacggcatcggccatc
gagctttggtgggcgccgttccccttcgaccgccgctctggacgtacggttcgtgcccag
gatgtacctctcgtaaagcattggtacttggagcactgcccgccgaagcagcccgttaag
gtgcgcgtctcgtaccagaagcttctcaagaactacgtcctcaatgagctgcacaagaag
catccaaaatctcttcagaagcaaaacttgctgcggactttgaaacaaacaaagttcttc
cagcagacaacgatcgattgggttgaagccggcttgcaagtctgccgacagggctttaac
atgctcaacctgcttatccaccgcaagaacctcacatatctccatttggactacaacttc
aacctgaagcccgtcaagacgctgacaaccaaggagcgaaagaagtctagattcggaaat
gccttccatcttatgcgtgaaattctgcgcttgaccaagctcattgtcgatgcccaggta
cagtaccgtcttggcaacattgacgccttccagcttgccgatggtattctgtatgccttc
aaccatgtcggacagttgaccggtatgtatcgttacaagtacaagttgatgcaccagatc
cgttcctgcaaggatctcaagcatctcatctactatcgcttcaacgccggcccggttggc
aagggtccaggctgcggtttctgggcgccggcatggcgtgtgtggctcttcttcatgcgc
ggtatcattccccttcttgaaagatggcttggcaacctcctttcccgtcagttcgaaggt
cgccacagcaagggagttgccaagaccgttaccaagcagcgtgttgaatctcacttcgat
ctcgagcttcgtgcttccgtcatggctgatctgctggacatgatgccggaaggtatcaag
cagagcaaggtcaacacggttcttcaacatctttctgaggcctggagatgctggaagagt
aacattccttggaaggttcctggacttcccgcagctattgagaacatcattctgcgttac
gtcaagtccaaggccgattggtggatttcggttgctcattacaaccgggagcgtattcgt
cggggtgccaccgtcgataagaccgttgctaagaagaacgttggccgcctaacgcgtctg
tggctcaaggccgagcaagaacgccagcacaaccacatgaaggatggtccctacgtctct
tctgaggaggctgttgccatttacactactacggtgcactggcttgaatcgagaaaattc
tctcccatccccttccccagtgtgtcttacaagcatgacaccaagatccttatcttggcg
ctggagcgcctacgtgaggcttactcgaccaagggaagattgaaccagagtcagcgtgag
gagttggccttgattgagcaggcatatgacagtccaggcactaccctcgagcgtatcaaa
cgcttcctactcactcaaagagctttcaaggaagtcggcatcgatatgaacgacaactac
agcaccatcaacccggtctatgatattgaaccgatcgagaagattagcgatgcttatctc
gaccagtacttgtggtatcaagctgaccagcgccatctgttccccgcttggattaagcct
tccgattcggaggtgccacctttgcttgtgtacaagtgggctcaaggcattaacaacctc
gacagggtttgggagaccgcgaatggcgagtgcaatgtcatgatcgagacgcagctctcc
aaggtctacgagaagattgagctgaccttgctcaactcgcttcttcggttgataatggac
cacaaccttgcggactacatcacggccaagaataacgttaccctaacttacaaggacatg
aaccatgtcaacagctatggtatgattcgtggcctgcagttctcagccttcgttttccag
tactatggtctcattctcgatttgctgttgcttggcccgcagcgtgccagcgagattgcc
ggtcctccccacgcacccaatgacttccttcagttcaaggaccgggagactgaaacaaga
cacccgattaggttgtacaccaggtacatcgacaagatctgggtgttcttgaggttcacc
gcggatgaatctcgcgacctgatccagcgattcttgacagagcagcctgatcccaacttc
gagaacgtgattggttacaagagcaagaagtgctggcccagagattcgcgtatgcgtctc
atgaggcacgacgtcaacctcggcagagctgtgttctgggatctcaagaaccgcctccca
agatccgtgacgacgattgaatgggaagacaccttcgccagcgtgtacagcagggataac
ccgaacctcctgttctccatgtgcggcttcgaagtgcgcatcttgcccaagatccgcaac
cagaacgatgagttccctgtgaaagacagtgtctggtcactagtggacaacacgaccaag
gaacgcaccgctcacgctttcctacaagttaccgaagaggacattcagaaattcaataac
aggatccgtcagattctcatgtcgtctggctcgaccacattcaccaagattgctaacaag
tggaacacggcgctgattgccctctttacttactaccgcgaggctgctgtttcgaccgtg
aacctgcttgacacgattgtcaagtgtgaaaccaaaatccagactcgtgtcaaaattggt
ctcaactccaagatgccttcccgtttccctcctgccgttttctacactcccaaggagctt
ggtggcttgggtatgatttccggatcacacatccttatccctactagcgacaagcgctgg
tctaaacagacagatctcggagttactcattaccgtgcgggcatgtcgcacgatgaggaa
acgctgatccccaacatcttccgctacatcatcccgtgggaagctgagtttatcgactcc
cagcgtgtgtggacggaatactcgcagaagcgtctcgaggccaaccagcagaaccgcaga
ttgaccctagaggatctggaggacagctgggatcgcggtctgccccgtataaacactctt
tttcaaaaggaccgtagcacgttaagcttcgacaagggtttccgtgcccgttccgagttc
aagatctatcagttgatgaagagcaatcccttctggtggacaagccagaggcatgacggt
aaactttggaaccttaacgcataccgtaccgatgtcatccaggcgcttggtggtgtcgaa
accatcttggagcataccttgttcaaggcaactggtttcccgtcttgggaaggtctcttc
tgggagaaggccagtggtttcgaggagtcgatgaagttcaagaagttgacaaatgcccag
aggagcggtctcaaccagattcctaatcgtcgtttcacgctttggtggtcgcctaccatc
aacagagccaatgtctacgtcggtttccaagtgcagttggatctaactggtatcttcttg
cacggcaagattcctactctcaagatctccctgatccagatcttccgagctcatctgtgg
cagaagatccacgagtcagtggtcatggatctttgccaggtcttcgatcaggagcttgag
gctctaagcatcgaatcggttcaaaaggaaaccattcatcccagaaaatcttacaagatg
aacagctcctgcgcggatatccagctctttgccagccacaaatggaacgttactcgccca
tcgctccttttcgataccaaggatgtcatcgagtctactacgacgaacaagttttggatt
gatgttcagcttcgctatggtgactacgactctcacgatattgagagatacgtcagggcc
aagtatctggactacaccaccgacagcatgagtctttacccatctcctaccggtctcatg
attggcatcgatctggcttacaacttgtactctgcctacggtcaatacttcccaggcttg
aagctcttgatccagcaggctatgggcaagatcatgaaggcaaaccctgcgctctacgtt
cttcgtgagcgtatccgcaagggtctgcagctctacgcctccgagagcaaccaggagttc
ctgaattcgcagaactactcggagctgttcagcaaccagactcagctctttatcgatgat
actaacgtctaccgtgttaccatccacaagaccttcgaaggtaacttgacgaccaagccg
atcaacggtgccatcttcatcttcaacccgcgtaccggtcagttgttcttgaagattatc
cacaccagcgtttgggcgggtcagaagcgtttgggacagttggccaagtggaagactgcc
gaagaagtcgcagcccttatcagatcgctacccgtcgaagagcagccaaagcaactgatc
gtcaccagaaagggtctgttggatcctttggaagtcaatttgcttgatttccccaacatc
tccatccgcgcgtccgagttgcagcttcccttccaggccgccatgaaggtcgaaaaactg
ggtgacatgatcttgcgtgccaccgagccgcagatggtcttgttcaatctctacgacgag
tggctgaagagcatctcttcctacactgccttctcccgtctcattctcatcctgcgtgcc
ctgcacgttaaccaggataagacgaagctcatcttgcgccccgacaagaccgtcatcacg
caggatcatcacatctggccctcgctctccgatgaagactggatcaaggttgaaacgcag
ctccgcgatcttatcctcaacgactacggcaagaagaacaatgtcaatgtgtccagttta
actagcagtgaagtccgtgatatcattcttggtatggagatctcagccccctcgctgcag
aggcagcaggcggcggagattgagaagcagcagcaagagcagcagcagctcaccgccgtc
actaccaagacgcagaacgtgcacggcgaggagatcattgtgacgaccacttcgcagttc
gaacagcagacgttcgcctccaagaccgagtggcgcaccagagccatcgccacctcgaac
ctacgcaccagggctaacaacatgtacgtgtcgcccgtggatagtgacctggacgacgtg
acctatgtcatgcccaagaacatcctcaagcgcttcatcgccattgccgatctccgtgtc
caagtcgccggttacctctacggtgcctcgcccgccgacaacgaccaggtcaaggagatc
aagtgcatcgtcatggtgcctcagatcggtggtctgcgcaacgttcagttgcctcaccag
cttccccagcacgagtacctcaaggacatggagccactcggcatcattcacacacagtcg
ggcaacgagctgccgtacatgtccgccatggacgttacggagcacgcacgcctgcttgat
gcccacccgaattgggacaagcaaaacacactcaccgtcgccgtctcctttacgcccggt
agcgtgtcgctgtcggcctgggcgctcacgcctcagggcttcaagtggggcgtggagaac
aaggacatagccagcgaccagccgcaggggttcacaaccagcatgggcgaaaagcgccag
ctcctcctcagcgagaagttccggggctttttcctggtgccggatggcggcaagtggaac
tacagcttcatgggcagcgcgtttggaggcctggagaaaaagccggtgcatgtcaagctg
gatacgccgctgcccttttacagcgaccagcacagacctattcacttctcgagcttcaac
gagttagaggatatctgggttgataggcaggataactttgcctaa
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