KEGG   Neurospora crassa: NCU07885
Entry
NCU07885          CDS       T01034                                 
Name
(RefSeq) WD repeat containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
ncr  Neurospora crassa
Pathway
ncr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    NCU07885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU07885
   03036 Chromosome and associated proteins [BR:ncr03036]
    NCU07885
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     NCU07885
Chromosome and associated proteins [BR:ncr03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     NCU07885
    COMPASS/SET1 complex (yeast)
     NCU07885
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_2nd PAC11 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_NOL10_N WDR55 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 3878957
NCBI-ProteinID: XP_962818
UniProt: Q7SB08
LinkDB
Position
III:1233841..1235810
AA seq 377 aa
MSSTPMDIDEPGAGTPSLNVTRLLGPNGPSTSKISEVIKNFRPTKFFQRDDVKEGRPQPY
VLSIDFDDPGELCMTSESDETIQIYNVREGRHDKSLLSKKYGVKHAKFTHSSSGIIYAST
KQNDAIRYLATHDNTFIRYFEGHEASVTNIALHPGSDNFLSCSLDTTVRLWDLNSRNWVA
KFHLTNPTLAAWDPAGLVFAIALPASASILLYDYRNYVKPFKIIDVLKEKGPADADAVFR
GWTKLEFSNDGKHILLGTRTGGHFLFDAIDGNLKAYLRKPQGGTRRPAPGEADGGSGALE
SSGDCCFTPDGRYVVSGAAKDLLVWDTLQTPNNKVLEPNFLPQEGKKEPVLVQYNPRFNM
IATADKELMFWLPVSDL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgtcatcgacaccgatggacatcgacgaacccggcgcgggaacaccctccctgaacgtt
actcggttacttgggcctaatgggcccagtacctccaagatcagtgaggtgatcaagaat
tttaggccgacaaagttcttccagagagacgacgtgaaggagggtaggccccagccatac
gttctatcgatcgactttgacgaccctggcgagctttgcatgacgtctgaaagcgacgag
accatccagatatataacgttagggaaggtcggcatgacaagagcttgctgagcaaaaag
tacggcgtcaagcatgcgaagtttacacattccagctcgggcatcatctatgcgagcacg
aagcaaaacgacgcaatccgctatctggcaacccacgacaatacgtttatccgatatttc
gaaggccacgaggcctccgttaccaacattgctctccatcccggctccgataactttctt
tcatgcagtcttgacaccacagtcaggctctgggacctcaacagcaggaactgggttgcc
aaattccatctcaccaatcccactttagcggcctgggaccctgctggtctcgtttttgcc
atcgccctaccagccagcgccagcattctcctttacgattaccgcaactacgtgaaaccg
ttcaagatcatcgacgttttgaaagagaaggggccagctgatgcggatgccgtcttcaga
ggctggacgaaactcgagttctccaacgacgggaagcatattcttctaggaacacggacc
ggaggacacttcctctttgacgccattgacgggaacctgaaggcgtacttgcgaaagccc
caaggcggcaccagacggccagcccctggcgaggctgatggtggaagcggtgcgctagag
agcagtggagactgttgctttacgccagatggacgatatgtcgtgtcgggcgcggccaag
gacctgttggtttgggacacattgcaaactcccaataacaaggttctggaaccgaatttc
cttccccaggaaggaaagaaggaaccagtccttgtgcagtacaacccaagattcaacatg
attgccactgcggataaggagcttatgttttggctgccggtctccgatttataa

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