Neurospora crassa: NCU08036 Help Entry NCU08036          CDS       T01034                                  Name (RefSeq) pre-mRNA-splicing factor syf-1   KO K12867   pre-mRNA-splicing factor SYF1 Organism ncr  Neurospora crassa Pathway ncr03040   Spliceosome Brite KEGG Orthology (KO) [BR:ncr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     NCU08036  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ncr03019]     NCU08036    03041 Spliceosome [BR:ncr03041]     NCU08036 Messenger RNA biogenesis [BR:ncr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      NCU08036 Spliceosome [BR:ncr03041]  Complex B   Other components    Prp19-related factors     NCU08036  Complex C     NCU08036 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 Mad3_BUB1_I TPR_8 RPN7 ARM_TT21_C NRDE-2 Motif Other DBs NCBI-GeneID:  3878813 NCBI-ProteinID:  XP_962706 UniProt:  Q7SAK5 LinkDB All DBs Position IV:3978581..3982163 Genome browser AA seq 829 aa AA seqDB search MSILSRVSDRRPDLSLVSEEDFPYEQDIVRNPGSTKPWLAYIEYKLQKGTVQEQAYIMER ACVQLPRSYKLWKMYLRFRTKHVSKLNAAIFASEYQKVNSLFERALILLNKMPRIWEMYL KFLMQQPLVTHTRRTFDRALRALPITQHNRIWALYRPFANSAEGETAVKIWRRYMQVHPE DAEDFIELLVAVGLYTEAVHKYIEILNNPRFTSKNSKGHYELWSEMVDLLVEHATAVETG HETGIDVERIIRSGIERFADQRGKLWCGLATYWIRRGSFERARDVFEEGITTVMTVRDFT LVFDSYTEFEESIISALMEMASTRAEKGEVDEVADFDLDIRMMRFEHLMDRRPFLLNDVL LRQNPNNVTEWEKRVALWGDNKEEVVKTYLDAIEAIQPKKAVGALHQLWTNYAKFYEAGG DLSSARRIMEKAVKVPYKSVAELADMWIEWAEMELRNECFDEAMKVMAKAVQAPKRSTVD YFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVYERIFELRIATPQTVVNYANLL EEHKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLRDLFEQAVEDCPPK FAKVIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPSTRP IYERAIAALPDAEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPGFWTKWDQF EVQHGNEDTYKEMLRIKRSVQAQYNTDVNFIASQALARSQQKRMEEEAAGNGGGEMDAEV ADAMAQLERQARAPVGFVAASEGPKGGSMPVQPVEVHNPDAIDLDEMDE NT seq 2490 nt NT seq  +upstreamnt  +downstreamnt atgtctatcctttcacgcgtctccgaccgtcgcccagacctctctttggtcagcgaggag gactttccttacgaacaagacatcgtccgtaaccccggcagcacgaagccatggcttgcc tatatcgagtacaagcttcagaaagggacggtccaggagcaggcatatatcatggagcgc gcctgtgtgcaacttcctcgatcctataagctttggaagatgtacctccggtttaggacg aagcacgtttcgaagctcaatgccgccatctttgcctcggagtaccaaaaggtcaacagc ctctttgagcgggccctcattctcctcaacaagatgcctaggatatgggagatgtacctc aagtttctgatgcagcagccgctcgtgacacacacacgtcgcaccttcgatcgggccctt cgcgctctccccatcacgcaacacaataggatatgggctctgtatcgacccttcgccaac tcggccgaaggcgagacggcggtcaagatctggcgcaggtacatgcaggttcacccagag gatgccgaggacttcatcgagttgttggtggcagtggggctatatacggaagccgtgcac aaatacatcgaaattctcaacaacccgcggtttacgagcaagaacagcaagggacactac gaactgtggagcgagatggtagatttgttggtcgagcatgcgacggcggtggaaacgggg catgagacgggaatcgatgtcgaacggatcatccgcagtggtatcgagcggtttgccgac cagaggggtaagctgtggtgcggcttggcgacctattggattcgacgaggcagctttgaa cgcgcacgagacgttttcgaggagggtatcacaaccgtcatgaccgttcgagacttcacc ctcgtcttcgattcgtacacggagtttgaggagtccatcatcagcgctctgatggagatg gcatcgacccgggctgagaagggagaggtggacgaggtggctgatttcgatttggatatc cgaatgatgcggttcgagcatctaatggaccgccggcccttcctcttgaatgatgtccta ctgaggcagaacccgaacaatgttacggaatgggagaagcgtgtggctctatggggcgac aacaaggaggaagttgtcaagacttaccttgatgctatcgaagccatccaaccaaagaag gcagtgggtgcgctccaccagctatggaccaattacgccaaattctacgaggccggagga gacctttcaagtgcccgaagaatcatggagaaggctgtcaaggttccttacaagtccgtg gcagagttggcagacatgtggattgagtgggcagagatggagcttcgaaacgagtgcttc gacgaggccatgaaagtcatggcaaaggcagtacaggcgcccaagagatccacggtggac tatttcgacgaaaccctatcaccacaacaaagggttcacaagagctggaagttgtggagt ttctatgtcgaccttgtggaaagtgtcagctcgttggacgagacccgcaaggtgtacgag aggatattcgagcttcgcatcgccactcctcaaacagtagtcaactacgccaacctgctg gaggagcacaagtactttgaagagtcgtttaagatctacgagcgcggtctcgatctcttc agctaccccgtggccttcgaactctggaacctgtacctcaccaaagccgtcgaccgcaag atcagtatcgagcgcctccgcgatctctttgagcaagccgtcgaggattgcccacccaaa ttcgccaaggtcatctatctcatgtatggcaacctcgaggaggagcgcggcctcgcgcgc cacgccatgcgcatctacgagcgggccacgcgcgccgtcgccgacgaggaccgggccgac atgttcaacttctacatcaccaagtcggcatccaacttcggtctgccctcgacgcggccc atctacgagcgcgccattgcggccttacccgacgccgaggcccgcgacatgtgcctcaag ttcgccgacatggagaagcggctgggcgagatcgaccgcgcccgtgccatctacggtcac gcctcgcagttttgcgacccgcgcaccaacccgggcttctggaccaagtgggatcagttc gaggtgcaacacggcaacgaggacacttacaaggagatgctccgcatcaagagaagcgtg caggcgcagtacaacacggatgtcaactttattgcttcgcaggcgctggcgaggagtcag cagaagaggatggaggaggaggcagcaggaaacggaggaggagagatggacgccgaggtt gcggatgcgatggcgcagttggagagacaggcgcgcgcgcccgtgggctttgtggcggct tcggaaggaccaaagggcggtagcatgccggttcagcctgttgaggttcataacccggat gctatcgatcttgatgaaatggatgaatga

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