Neurospora crassa: NCU08270
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Entry
NCU08270 CDS
T01034
Symbol
dcl-1
Name
(RefSeq) dicer-like protein 1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ncr
Neurospora crassa
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU08270 (dcl-1)
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
NCU08270 (dcl-1)
microRNA pathway
RISC loading complex
NCU08270 (dcl-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
DSRM_2
Dicer_dimer
Ribonucleas_3_3
ResIII
Helicase_C
DEAD
ERCC3_RAD25_C
AAA_22
Fructosamin_kin
Motif
Other DBs
NCBI-GeneID:
3878050
NCBI-ProteinID:
XP_961898
UniProt:
Q7S8J7
LinkDB
All DBs
Position
IV:complement(2592691..2598157)
Genome browser
AA seq
1584 aa
AA seq
DB search
MAVATRLPFIPPEATSQIIGGDEDLIDLSQEDVVSDNDDRGNASDVESEDGVKRWTVNPE
PKPKKISAKKLADTAAFNSWIEEHQETLARDQRKAAIEAARVAGVDVLPAIGFDSERIIT
SPREYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVITGELEDREKGLPRRIAFFLV
DKVALVFQQHSFLTKNLDFPMEKLCGEMVEGVESKAFWKEALEQNEVVVCTAEILSTALH
HSWIRMDQINLLIFDEAHHTKKDHPYARIIKNFYIDEQLERRPRILGLTASPVDAKVDPR
RAAAELEALLHSQIATAADPAALQHTICKPKTELVVEYVRGRPDSETVLNKQLRKLVGGQ
ELFKKPLNFTTSAASKLGTWCADRYWQLFFKQEDIVKLESRTERDLMKVAALDEITEKHV
KQVREAHELVNAHTFSPAALDPTMLSSKVIMLVRILRDQFERGVGAQRCIIFVRQRNTAM
LLADLLQQPEIKSHIPSIAAEVLVGGGTTGSSYVNAKINFQQQNRIIRKFKLGEINCLFA
TSVAEEGLDIPDCNIVIRFDLYDTLIQCIQSRGRARRPDSRYIQMIEKGNYEHHSRILRA
KGAEDVLRKFCEALPEDRKLTGNHMNLDYLLRKEKGKRQYTVPDTGAKLSYMQSLVCLAN
FTATLPHPPETSLSPEYYITTVPGGFQCEVVMPDASPIKSAVGKVHLSKGVAKCAAAFEL
CLALLKAGHLDNHLQSVFTKQLPEMRNARLAVSSKKKTEYAMRLKPELWSVRGVVTQLFA
TAFVLENPDTLGRSSRPLLLLSRSALPEVASFPLFFGTKRFSKVRCVPIPGSVQADDTLV
EQLTRFTLKAFMDVFSKEYEATAVNLPYFLSPMDGGHGFDFRLAKSPAHLIDRKALAYVS
ENEKVPYTFLEPDDFFQDKFVVDPYDGARKFFTHHRRHDMKPTDPVPDGIVAPNHRAWRG
LGTTHDILNYSNSLWSKSRGFMIFQADQPVVEAALISTRRDFLDDTLRDEDVEPQQCFLI
LEPMRISPIPADVVAMLLCFPSIIHRVESNLVALDACKLLGLDLRPDLALEAFTKDSDNS
DEHDAEKENFQTGMGDNYERLEFLGDSFLKMATTIAIYTLIPDKGEFEYHVERMLLICNK
NLFNNALEIGLEEYIRSMSFNRRQWYPEGLILKKGKSKDARQRHVLADKSIADVCEALIG
AAYLTGQEKGSFDMAIKAVTAMVKDKKHRMISYGDYYAVYQKPTWQTESANSAQRDMAKK
FSERMGYKFKHPRLLRAAFQHPTYPSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAA
DPQWLTEHKMAMVSNQFLCCLSFHLGFNKCIATMSPSILKDIAEYVTEIEEALETAKQEA
INAGKTADEYSRDYWVHITHASRLPKCLSDVVEAYIGAIFVDSEYDYSVVQNFFNMHVLP
FFEDMHLYDTFANKHPVTFVANMMAHKFRCNEWRSFAKELDTDVTEGRGGRGGNGAVAGE
ISEINPPKVVSALLVHGKTVVHAVAASGRYAKSAMAKKAIKLLEGMSVEEFRERLGCNCK
GVPMEVDGGVPEADVDGEVHGTAV
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggccgtagccactcggctaccctttatcccaccggaggcgactagccagataatcggc
ggcgatgaagatttgatagatctctcccaagaagatgtggtctccgacaacgacgacaga
ggaaacgcctctgatgtcgagagcgaggacggcgttaaaagatggacagtgaacccggaa
cccaagcccaagaagatttcggccaagaagcttgccgatactgctgctttcaactcgtgg
atcgaggagcaccaggaaactctggcaagagaccaaagaaaagccgcgatagaagcggca
agggtggccggcgtggacgtgttgcccgctattggctttgatagcgagagaatcatcact
tcaccacgagaatatcaggtggagctttttgaacgtgcaaaacagcaaaacacgattgct
gttctggatacaggatccggaaagactctgatcgccgccatgttgttacgctgggtcatt
actggtgaattggaggaccgagaaaagggtttacccagacggattgccttcttcctggtc
gacaaggtggccttggtgttccaacaacacagctttctcaccaagaacctcgatttccca
atggagaaactatgcggtgagatggtggaaggtgtcgaatcaaaagctttctggaaggaa
gcattggagcaaaacgaagtggttgtctgtacagctgaaatcctcagcacagcgctccat
cattcctggattagaatggaccagatcaacctcttgatcttcgacgaagcccaccatacg
aaaaaagatcatccgtatgctcgcatcatcaagaacttttatattgatgagcagctggag
agaagacccagaatccttggcttgacggcctccccggttgacgcgaaggttgacccgagg
cgggctgcggcagaactggaggcgttacttcacagccaaatagccacggccgccgacccg
gccgcccttcagcatacgatttgcaaacccaagaccgagttggttgttgaatacgttcgt
ggtcgaccagactcggagacagtcctcaacaagcaattacgcaaacttgttggaggacaa
gagctgtttaagaagccgctcaactttactacctcggctgcatctaaattgggaacatgg
tgtgccgaccggtattggcaacttttcttcaaacaagaggacatagtcaaactggaatca
cgcactgagagagatctcatgaaagtcgcagccctcgatgaaatcaccgaaaagcacgtc
aagcaagtccgtgaagctcacgagttggttaacgcgcatacattttcacccgctgctctc
gatccgacgatgttgtcgtccaaggtcatcatgcttgttagaatcttgcgtgatcagttc
gagaggggcgtgggtgcgcaaagatgcattatttttgtccgacagcggaacacggcgatg
ctgttggcggatttgctccagcagcctgagataaagtctcacatacccagcattgcagca
gaagtcttggttggaggtgggacaactggctcaagctatgtcaacgccaagatcaacttc
cagcaacaaaacagaataattcgaaagttcaagcttggcgagataaactgcctatttgct
acttctgttgctgaggaaggtctcgatattccagattgcaatatcgttatcagattcgat
ctctatgatactctgattcagtgtatccagtcgcgtggtcgagctcgtcgtccagattct
cgctacatccagatgatcgaaaaagggaattacgagcaccactccaggatattgcgagct
aaaggggctgaagatgtcctgcgcaagttctgcgaggctctacccgaagacaggaagctg
actggcaaccatatgaacttggactatctgcttcggaaggaaaagggcaagaggcagtac
actgtcccagatactggtgcgaaactcagctatatgcaaagccttgtctgtctcgccaac
ttcaccgccaccctaccacacccaccggagacgagtttgagtccggaatactacatcacc
actgttcctggtggctttcagtgcgaggtcgtcatgcctgatgcatcacccatcaagagc
gcggttggcaaagtacatttaagtaagggggtggccaaatgtgcagctgcattcgagctt
tgccttgctttactcaaggctggccacttggataaccacctccagtctgtgttcaccaag
cagctaccggaaatgcggaatgctcgccttgctgtcagctcaaagaagaagacggagtac
gccatgcgtctgaagcccgaattatggtcggttcgaggcgtggtcacgcagctttttgcc
actgcgtttgttctggagaacccggacacccttgggcgtagctctcgtcctcttctcctg
cttagtagaagcgctctcccagaagtggcttcctttccgctcttttttggcactaagcgc
ttttccaaagtccgctgcgtgcctatcccaggttctgtccaggctgacgatacgttggtg
gagcaacttactcgtttcaccctgaaagctttcatggatgttttcagcaaggaatacgag
gcgacagcagtcaaccttccgtactttctctctccaatggacggtggtcacgggtttgac
ttccgcttggccaagagcccagctcacctcattgaccgaaaagcgctagcatacgtcagt
gagaacgagaaggtgccatacacgtttcttgagccagatgattttttccaagacaagttt
gtagttgacccatacgacggagcacggaagttctttactcatcaccgtcgccatgacatg
aaacccacggatcccgtgccagatggtattgttgcaccgaatcacagggcttggagaggc
ttaggcaccacacatgacattctgaactacagcaacagcttatggtcaaagtcgcgtggc
tttatgatattccaggcggatcagcctgtcgtggaggctgcgcttatttccactcgtcga
gactttctcgacgatacgctgagggatgaggacgtggaaccacaacagtgtttcctgatt
cttgaacccatgaggatttcacctataccagcagatgtggtggcaatgcttctctgtttc
ccgtcaatcatacaccgggtagaatcgaatctagttgcattggacgcatgcaagcttctg
ggtctagacttgcgcccagacctcgcccttgaggccttcaccaaggacagcgataactcg
gatgaacacgatgccgagaaggaaaactttcaaactggaatgggtgacaactacgagaga
ctcgagtttcttggtgactccttcttgaaaatggcaacaaccattgccatatataccttg
atccctgacaagggcgaattcgagtatcatgtcgagcgtatgctccttatctgcaacaag
aacctattcaacaacgccctagagatagggctcgaagaatacatccggtccatgtcattt
aaccgcagacaatggtatccggagggcctaattttgaagaagggcaagagtaaggacgcg
cgtcagcggcatgtcctggccgacaagtccattgctgacgtttgcgaggccctcattggc
gccgcctaccttacaggccaagagaagggcagctttgacatggcgatcaaggctgtaact
gccatggtcaaagacaagaagcaccgcatgatcagctacggcgactactacgccgtatat
caaaagccaacctggcagacggaatcagccaatagtgcccagcgcgacatggccaaaaag
ttttccgagcgcatgggctacaaattcaagcacccgcgtctcttgcgcgcagccttccag
cacccgacgtacccgtccctctacgaacgtctcccctcgtaccaacgcctcgaattcctc
ggcgacgcgctcttcgacatggtcgctgttgattacctcttccgcaagttccccgccgcc
gacccgcaatggctaacggagcacaaaatggccatggtgtccaaccagtttctgtgctgc
ctctccttccacttgggattcaacaagtgcatcgccaccatgtcgccctccatcctcaag
gacatcgccgagtatgtgaccgagatagaagaagcacttgagacggccaagcaggaggct
atcaacgcaggaaaaaccgcagacgagtatagcagggattactgggtgcacatcacacac
gcttctcgcttgcccaagtgcctgtcggacgtggtggaggcatacattggcgccatcttc
gttgacagcgagtacgattactccgtagtccaaaacttcttcaacatgcacgttctgcct
tttttcgaggatatgcatctttatgataccttcgccaacaaacatcccgtcacctttgtg
gcgaacatgatggcgcacaagttccgctgcaacgagtggagaagctttgccaaggagctg
gacacagatgttacggaaggaagaggtggaagagggggcaatggtgcagtggctggtgag
attagtgagatcaatccgcccaaggtggtctcggcgctactggtacatggcaagacggtg
gtgcatgcggtggcggccagtggacggtatgcaaagtcggctatggcgaagaaggctatc
aagcttttggagggcatgagcgtggaggagttcagggagaggttggggtgtaattgtaag
ggggtgccgatggaggttgatggaggagtgccagaggcggatgtggatggagaggtacat
ggcacggcggtttag
DBGET
integrated database retrieval system
