Neurospora crassa: NCU08353
Help
Entry
NCU08353 CDS
T01034
Name
(RefSeq) mRNA 3'-end-processing protein yth-1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ncr
Neurospora crassa
Pathway
ncr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCU08353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncr03021
]
NCU08353
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU08353
Transcription machinery [BR:
ncr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NCU08353
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NCU08353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_9
zf-CCCH_DUS3L
zf-CCCH_12
Activator_LAG-3
Motif
Other DBs
NCBI-GeneID:
3881396
NCBI-ProteinID:
XP_965256
UniProt:
Q7SGR2
LinkDB
All DBs
Position
I:complement(5654608..5656118)
Genome browser
AA seq
317 aa
AA seq
DB search
MATTTQTTTNSLPSGAGGPQQLVTQMLNHTAPHYTFSFTPFLQRTYQHSLPADRPICKAY
ASGNCPLKSHCPERHVTASSQNTHGGGNTFSGGFGSLVCKHWLRGLCKKGESCEFLHEYN
LRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPCPHYERGFCPLGPRCDKKHFRRKLC
LYYLAGFCPDGKGCKEGAHPRWTADKDMEKPRAKGEGDQMLLQQQQQQQQQQHMGDANGM
GGGMAQATGANEYMDRERERDRDNREREMMMQGRDRDGGGHDRHKDRFGGGGGGGGGGRG
RGGWRGRGRGGFRGKGH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacaacacagacaacaacaaactccctcccctctggggcaggaggaccgcaa
caactcgtcactcagatgctcaaccacaccgcgccacactataccttctccttcacgccc
ttcctccagcgcacgtaccagcactctctccccgccgaccgacccatctgcaaagcctac
gcctcaggcaactgccccctcaaatcccactgccccgagcgccacgttaccgcgtcgtcc
caaaacacccatggcggcggtaacaccttcagcggcggcttcggctcgctagtctgcaag
cattggctgcgcggcctctgcaaaaagggcgaatcgtgcgagttcctgcacgagtacaac
ctgcgcaagatgcccgagtgcaatttcttcgtcaggaacgggtactgcagcaacggggac
gagtgtctgtatctgcacattgatccgctgtcgagattgccgccgtgcccgcattacgag
agggggttctgtccgctgggaccgcgatgtgacaagaagcatttccggaggaagctgtgt
ttgtattacctggcgggcttctgtccggatgggaagggctgcaaggagggcgcgcatccg
aggtggacggcggataaggatatggagaagccgagggcgaagggggagggagatcagatg
ctgctgcagcagcaacagcagcagcaacaacaacaacacatgggcgatgctaatggtatg
ggtggtggaatggcgcaggcgacgggcgcgaatgagtatatggaccgagagagggagcgc
gatcgggataacagggagagggagatgatgatgcagggacgcgatagggacggtggcggg
catgatcgccataaggatcgctttggaggcggaggaggaggaggaggaggaggcagaggc
cgaggaggatggaggggaagaggaaggggaggatttaggggtaaaggtcattaa
DBGET
integrated database retrieval system
