Neurospora crassa: NCU08427
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Entry
NCU08427 CDS
T01034
Name
(RefSeq) activator 1 subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ncr
Neurospora crassa
Pathway
ncr03030
DNA replication
ncr03410
Base excision repair
ncr03420
Nucleotide excision repair
ncr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCU08427
03410 Base excision repair
NCU08427
03420 Nucleotide excision repair
NCU08427
03430 Mismatch repair
NCU08427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncr03032
]
NCU08427
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU08427
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU08427
DNA replication proteins [BR:
ncr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NCU08427
DNA Replication Termination Factors
ELG1-RFC complex
NCU08427
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
NCU08427
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NCU08427
Check point factors
HRAD17(Rad24)-RFC complex
NCU08427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_assoc_2
AAA_30
RCF1-5-like_lid
AAA_22
AAA_11
Rad17
AAA_16
AAA_24
RuvB_N
DUF815
ResIII
AAA_3
AAA_14
AAA_19
DEAD
AAA_5
PhoH
AAA_28
SLFN-g3_helicase
Mg_chelatase
AAA_7
DNAX_ATPase_lid
RNA_helicase
CCDC138_C
bpMoxR
AAA_18
Motif
Other DBs
NCBI-GeneID:
3879557
NCBI-ProteinID:
XP_963397
UniProt:
Q1K8P6
LinkDB
All DBs
Position
II:4033287..4035005
Genome browser
AA seq
389 aa
AA seq
DB search
MSDFEDEMDIDVPVSKDVMFAATNTAKGKRSAANLPVEAEDSLPWVEKYRPVSLSDVSGQ
QDILATINKFVDTNRLPHLLFYGPPGTGKTSTVLALARQIYGAANMRQMVLELNASDDRG
IDVVREQIKTFASTKQIFSLGSSSSRSGLAGFKLIILDEADAMTSTAQMALRRIMEKYTA
NTRFCIIANYSHKLSPALLSRCTRFRFSPLKEKDIRVLVDKVIDEENVKILPDATDALVR
LSKGDMRRALNVLQACHASSTPLQPKNAPKIAEKDIVRETITIRTIYDCVAAPPPDAIKK
ILSTLLSTSDVTTCLSTINTLKVAQGLALADIITALSEEIVKLEVKPQVMITWLDELAKI
EHRVASGAGEVIQTGAVVGAIRNGVELMG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttgaagacgaaatggacattgatgtcccagtgtccaaggacgtcatgttc
gctgccaccaacacggccaagggcaagcgaagcgctgccaacctgcctgttgaagcagaa
gacagtctcccatgggtcgagaagtaccgccccgtatccctctccgatgtgtctggccaa
caagacattctcgcaaccatcaacaagtttgtcgacacgaaccgactcccccatctccta
ttctacggtccccccggtaccggaaaaacatcgaccgttctcgccctggcccgacaaatc
tatggcgccgccaacatgcgccagatggtgctcgagttgaacgcttccgatgaccgtggt
atcgacgttgtgcgcgagcaaatcaagacctttgcctccaccaagcagatcttctccctc
ggctcctcctcttcgcgctcggggctggctggtttcaagcttattattctcgacgaggcc
gatgctatgacgtccacagcgcagatggccctccgtcgcatcatggaaaagtacacggcc
aacactcgcttctgcatcattgccaactactcccacaagctcagcccagccctcctgtcg
agatgcacacggttccgtttcagccctctaaaagaaaaagatattcgtgtcttggtggac
aaggtcattgacgaggaaaacgtcaagattctgccagatgctaccgatgcgctggtgcgg
ttgagcaagggtgatatgcgtcgggcactaaacgtgctccaggcttgccacgcgtcaagc
acaccactccaaccaaagaacgcccccaagatcgccgaaaaggacattgtacgggaaacc
atcaccattcgaaccatctacgactgcgttgccgccccaccacccgacgccatcaaaaag
attctcagcacacttttgagcacgagcgacgtcacaacctgtctgtcgactatcaacacc
ctcaaggttgcacaaggtttggcccttgccgacattatcaccgctctgtcggaagagatc
gtcaagctggaagtcaagccgcaggtcatgatcacatggcttgatgaacttgccaagatt
gagcatcgggtagcgagcggagccggagaggtgatccagactggtgcggtagtgggtgcg
atacggaatggtgtagaactgatgggatag
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integrated database retrieval system
