Neurospora crassa: NCU09063
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Entry
NCU09063 CDS
T01034
Name
(RefSeq) nuclear condensin complex subunit Smc4
KO
K06675
structural maintenance of chromosome 4
Organism
ncr
Neurospora crassa
Pathway
ncr04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
NCU09063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU09063
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
NCU09063
Condensin II
NCU09063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
ERM_helical
Crescentin
FlaC_arch
CCDC113_CCDC96_CC
AAA_13
ATG16
Motif
Other DBs
NCBI-GeneID:
3874714
NCBI-ProteinID:
XP_958567
UniProt:
Q7S1T6
LinkDB
All DBs
Position
VII:496558..502209
Genome browser
AA seq
1650 aa
AA seq
DB search
MSTRPSRRAAATRRAAIIEESSSDDDIANTTSRGAQDDDEEDDYTPAPASAARKTAQRTT
RRSTATPAPRAGTPAAASSSTAPAPAPKAAPKRRGRPKKNAAPKPSKEPSVEPSVEANND
PQAEPEAPAPAVKPKDEPIEEGIDPNVTVASAVSPATTAVIAEPEARDTQEIQSPPRKRR
TLVRRLSRSPAKIMQQQLELQQQQASRQGTPTPGSPSTQRVDRQPAPLQDITQTLINLPP
PATAASETLVNTQPTSTADETVVAAQKPVRAMDTILEKPMDIVLKSRTMALPVVEDTGPK
PRIVITNLVLINFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQ
GKISALIHNSAQFPNLDYCEVEVHFQEVMDLPGGGHEVIPDSTLVISRKAFKNNSSQYYI
NGKSSNFTTVTTLLRDRGVDLDHKRFLILQGEVESIAQMKPKAGNEHEDGLLEYLEDIIG
TSKYKTPIEESATEVETLNEICMEKSGRVQHVEKERNSLEDKKNKALAYVRDENELALKQ
SALYQLYISECDDNIAVTEEAIGQMQAQLDAELEKHHGSEQLIKQLEKAYSKGSKEYDSW
EKQTQQLVKEMNKFEQERVKFEEKRKFLTDKRKKLEKTIANAEKTAVEAEETIQNCTKEI
ERRQKDIVFLEKKVKEEEAELATIRESLKGKTQKYSDQIAAKQKSLEPWKDKINQKQSAI
AVAESELAILREKANAGTVALEEMETKIVAIQERQAAKAEEMEQCKAERANLIKEGKKIE
AELSKLAEEEPKYRQQLSNARQKADEARSSLSATQNRGNVLTALMRMKESGRIDGFHGRL
GNLGAIDQKYDIAISTACGALDNFVTDTVEAGQQCIEYLRKTNLGRGNFMCLDKLRVRDM
SPIQTPENAPRLFDLVKPKDDKFRPAFYHALQDTLVAKDLAQANRIAYGAKRWRVVTLAG
ELIDKSGTMTGGGTTVKRGLMSSKLVADTTKEQVDKLEADRDTLEQAFNEFQDRQRELES
RLRQIQSMIPQLETKMQKINLEVESSERNLADAQRRIKELSKEQQPSKTDDNRVAALEKE
IAKLEGEVEKLREEMSSVEDEIKALQDKIMKVGGEKLRSQKAAVDSLKAEIATQNEETSA
AEVKMAKAEKQKHKLEKDFNKASKELQNAIQETEALEEEIQNQGDTAESLTTRVEEAQEA
LKEKKKELAAMKKELDEKTAELNETRAVEIEMRNKLEENQKILSENQKRLRYWEDKLSKL
ALQDIEDLERGTSGDAAAPQQLADPDAMDVDDPDSILQAQLEAEAAEAEENEEDEEEEEE
EEDEDPEAMSLDEDDEEPRQRKQKTPKKQKQKRRQQTGKTPRKPRNPLELPRYTRDELAD
MSKEKLKGEIAALEEKISNVNIDLSVLSEYRRRVEEHLARSSDLASAVSQRDAAKKRLDE
LRRLRLEGFMEGFSTISLRLKEMYQMITMGGNAELELVDSLDPFSEGILFSVMPPKKSWK
NISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFRNVSIVASYIKERTKNAQF
IVISLRNNMFELAARLVGVYKVNHMTKSVTIENHDYIQRGKHQKEEKERRERERRQKEEE
KRERQEREQREREMMGQQSAAEVTVASIEA
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcgcccatcgcgtcgggccgccgcaaccaggcgcgccgccatcatcgaagaa
tcctcatcagacgacgatatcgcaaacaccacatcgagaggcgcccaagatgacgacgag
gaggacgattatacacccgcgccagcttcggcagcccgcaagactgctcagcgaaccacc
agaagatccactgccacgcccgctcctagggcaggaacaccagcagcagcatcatcatca
actgcaccggcaccggcaccaaaagctgcgccgaaaaggcgcggacgacctaagaagaat
gccgcgcccaaacccagcaaagagcccagtgtcgaaccgagtgtcgaagcgaataacgat
ccccaagccgaacccgaagccccagcgcctgccgtcaagccaaaggatgagccgatcgag
gagggtatcgaccccaatgtgactgtcgcgtctgccgtttcgcccgctacaaccgccgtg
atcgcggagccagaagcacgggatacgcaagaaattcagtcacccccgcggaagcgtaga
actcttgtgcggcgcctcagcagatcgccagcaaagatcatgcagcaacaactcgagctg
caacagcaacaagccagccgtcaagggacaccaacgccaggctctccgtcaactcaacgc
gtcgatcgccaacctgctcctctacaggacatcacccagaccctcatcaacctaccacct
ccagcgaccgcggcatcagagacccttgtcaacacacagccaacatcaacagcagatgaa
accgtcgtggcggcccagaagcccgtcagggctatggatactattctggaaaagcccatg
gatattgtgctcaagtcacggaccatggctcttcccgtcgtcgaggataccggcccgaag
ccacgcattgtcatcaccaatcttgtgctcatcaacttcaagagttacgccggtagacag
gaggtcggccccttccatgcttcgttctcttcggtcgtgggtcccaacggttctggcaaa
tccaacgtcatcgactcgttgctgttcgtctttggtttccgtgccagcaagatgcgacaa
ggcaagatctcggccttgattcacaattcggcgcagtttccgaatctcgactactgtgag
gtggaagtgcatttccaggaagtcatggacttgcccggcggtggccacgaggttatcccc
gactcaacactcgtcatctcgcgcaaagcattcaagaacaactcgagccagtactacatc
aacggcaaatcatccaattttaccaccgtgaccacgctactccgcgaccgtggtgtcgat
ctggatcacaagcgttttctcattctccagggcgaagtcgaatcgattgcccagatgaag
cccaaagccggcaacgagcacgaagatggtctgttggagtacctagaagacattattggc
acttccaaatacaagacaccaattgaagagtcggccaccgaagtcgaaaccctcaacgag
atctgcatggagaagagtggtcgtgtccagcacgtggaaaaggaaaggaacagtctcgag
gacaagaagaacaaggcgctggcgtatgttcgcgatgaaaacgaactggcgctgaaacag
tcggctctctaccagctatacatcagcgaatgcgacgacaatattgctgtcacagaggag
gctatcggtcagatgcaggcacaacttgacgctgagcttgagaagcaccacggcagcgaa
cagctcatcaagcagttggaaaaggcctactccaagggtagcaaggaatacgactcttgg
gagaagcagacacagcagctggtcaaggagatgaacaagttcgagcaggaacgcgtcaaa
ttcgaggagaagcggaagttcttgacggacaagcgtaagaagcttgagaagacgatcgct
aacgccgagaagacggctgttgaagcggaggagaccattcagaactgcaccaaggagatt
gagcgtcgtcaaaaggacattgttttcctggagaagaaggtcaaggaagaggaggccgag
cttgcgacgatacgtgagagcctcaagggcaagacgcaaaagtactcggatcagatcgcg
gcaaagcaaaagtctctcgagccttggaaggacaagatcaatcagaaacagtccgccatt
gccgttgcggagagtgagctggccattctcagggaaaaggccaatgccggaactgtggcc
cttgaggagatggagacgaaaattgtggccatccaggaaaggcaagcggcgaaggcggag
gagatggagcagtgcaaagctgagagagcgaacctgatcaaggagggcaagaagatcgag
gctgaactttccaagcttgcggaggaggaacccaagtaccggcaacagctttcgaatgcc
cgccaaaaggctgacgaggcgcggtcgagcttgtccgccacacaaaaccgaggcaatgtc
ttgactgcccttatgcgcatgaaggagtcgggtcgtatcgatgggtttcatggacgactt
ggaaatctcggtgctattgaccagaagtacgatattgccatctctacagcctgtggtgct
ctggacaactttgtcaccgacactgttgaggccggtcagcaatgtattgaatatctccga
aaaaccaacctcggacgtggtaattttatgtgcttggacaagttgcgagtccgcgacatg
tctcctattcagactcccgaaaacgcccctcgtctctttgaccttgtcaagcccaaagac
gacaagttccgacctgccttctaccatgctcttcaggacacattggtcgccaaggatctc
gctcaggcaaaccgcattgcctatggcgctaagagatggcgagtagtgacccttgccggc
gagctcatcgataagtcaggtaccatgaccggtggtggcactacagtcaagcggggtctg
atgtcctccaagcttgtggctgacaccaccaaggagcaagttgacaagcttgaggcggac
cgtgataccttggagcaggccttcaacgagttccaagaccgccaacgagaactcgagtcc
cgtctgcgccagatccagtccatgattccccagcttgagaccaagatgcagaagatcaac
ctcgaagttgagagctcggagcgcaaccttgccgatgcccagcgccgtatcaaggagctc
agcaaggagcaacagccttccaagacggatgacaaccgcgtcgccgcccttgaaaaggaa
attgccaagcttgagggcgaggtcgagaagctgcgcgaggagatgtcctccgtcgaggat
gaaattaaggctcttcaagataagatcatgaaggtaggtggtgaaaagcttcgctctcaa
aaagccgctgtggactcgttaaaggcagagatcgccacgcaaaacgaggaaacttctgcc
gccgaggtgaagatggcgaaagcggagaaacagaagcacaagctagagaaggactttaac
aaggcgtctaaagagctgcagaatgccattcaggagaccgaggctctggaagaggagatt
cagaaccagggcgatactgccgagagcctcacgacccgtgttgaagaggcccaggaggca
ctcaaggagaagaagaaagaactggcagctatgaagaaggagctggatgagaagacggcc
gagctcaacgagacaagggcggtggaaattgagatgcgcaataagctcgaggaaaaccaa
aagatcctgtctgagaaccagaagcgtctgcgctactgggaagacaagctctccaagctc
gccctccaagacattgaagatctcgagcgcggcaccagcggcgacgcagcagcacctcaa
caacttgccgaccctgatgccatggacgtcgacgaccctgattccattctccaagcccaa
ctcgaggccgaagccgccgaggccgaagagaacgaggaggacgaggaggaagaggaggag
gaggaagacgaagatccagaagccatgtccctcgacgaagacgacgaggaacctcgccag
cgcaagcagaaaacccccaagaagcaaaagcaaaagcgccgtcaacaaaccggcaaaacc
ccgcgcaaaccccgcaaccccctcgaactcccccgctacacccgcgacgagctagccgac
atgtccaaagagaaactcaagggcgagatcgccgcgctcgaagagaagatctccaacgtg
aacatcgacctgtctgtactctccgaataccgtcgtcgcgtggaagaacatctcgcgcgt
tcttcggacttggcctcagccgtctcccagcgcgacgccgccaagaagcgtctcgacgag
ctccgtcgtctgcgattggagggcttcatggaagggttctcgaccatctctcttagacta
aaagagatgtaccagatgatcaccatgggcggcaacgcagagctggagctggtggacagt
ctggaccccttctcggagggaatcttgttcagcgtgatgccgcccaagaagagctggaag
aatatttctaatctaagtggtggcgagaagacgttgagttctctggcgctggtgtttgca
ttgcatcattacaagccgacgccgctttatgtgatggatgaaattgatgcggcgctggat
ttcaggaatgtctccatcgtagcctcctacatcaaagaacgcaccaaaaacgcccaattc
atcgtcatctccctgcgcaacaacatgtttgagctcgccgcccgtctggtcggcgtctac
aaggtcaaccacatgaccaagtcggtcacaattgagaatcatgattatatccagcgaggc
aaacatcagaaggaggaaaaagaacggagggagagggagagacgccagaaagaagaggag
aagagggaaaggcaagaaagggaacaaagagagagggaaatgatgggacaacagtcggct
gcggaggttactgttgctagtattgaggcttag
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