Neurospora crassa: NCU09076
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Entry
NCU09076 CDS
T01034
Name
(RefSeq) ATP-dependent RNA helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ncr
Neurospora crassa
Pathway
ncr03013
Nucleocytoplasmic transport
ncr03015
mRNA surveillance pathway
ncr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCU09076
09122 Translation
03013 Nucleocytoplasmic transport
NCU09076
03015 mRNA surveillance pathway
NCU09076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU09076
03041 Spliceosome [BR:
ncr03041
]
NCU09076
Enzymes [BR:
ncr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCU09076
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NCU09076
Spliceosome [BR:
ncr03041
]
Complex C
Other components
EJC/TREX
NCU09076
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NCU09076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF4844
CMS1
Motif
Other DBs
NCBI-GeneID:
3881069
NCBI-ProteinID:
XP_964893
UniProt:
Q7RW10
LinkDB
All DBs
Position
I:complement(767193..770372)
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AA seq
434 aa
AA seq
DB search
MSAEEDLIDYSDDELNNDSAAPTNGKKAEAVPAGQTVDTKKGSYVGIHSTGFRDFLLKPE
LLRAIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECS
VLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEVLKNKETHPHIIVGTP
GRLNALVRDKHLRLGSVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSD
EIKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIPLEEREKNRKLNELLDELQFNQVIIF
VKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDI
ERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVTTDQDKEVLKAIEKRFEVALPE
FPKEGIDASTYMAS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgaggaagatctcatcgactactctgacgacgagctcaacaacgactccgcc
gctcccaccaacggcaagaaggccgaggctgtccccgccggccagactgtcgacaccaag
aagggctcctatgtcggcatccactcgactggcttccgcgactttctgctgaagcccgaa
cttcttcgcgccattgccgattgcggcttcgagcatccctcggaggttcagcagacatgt
atcccccaggccatgcttggtggtgatatcatctgccaagccaagtccggtctcggtaag
acggctgtcttcgtccttaccactcttcagcaagttgagcccgtcgccggcgagtgctct
gtcctcgtcatgtgccacactcgtgagctcgctttccagatccgcaacgagtacaaccgc
ttcagcaagtacatgcccgacatcaagaccggcgtcttctacggtggtactcccatccag
aaggatgccgaggttctcaagaacaaggagacccatccccacatcatcgtcggtactccc
ggtcgtctcaacgccctggtgcgcgacaagcacctccgtctcggaagcgtccgcatgttc
gttctcgatgagtgcgacaagatgctcgaccagatcgacatgcgccgcgacgttcaggag
attttccgcgccactccccagcagaagcaggtcatgatgttctccgctaccctgtcggac
gagatcaagcctatctgccgcaagttcatgcagaaccctaccgagcactacgttgacgaa
gacaccaaattgacccttcacggtcttcagcaatactacattcctcttgaggagcgcgag
aagaaccgcaagctcaacgagcttctcgacgagctgcagttcaaccaggtcatcatcttc
gtcaagagcactctccgtgctaccgagctggacaagcttttgcgcgagtgtaacttccct
tcgatcgctgtccactccggtgtgagccaggaggagcgtatccgtcgttacaaggaattc
aaggaattcaacaagcgtatctgcgtcgccactgacgtctttggtcgtggtatcgatatc
gaacgcatcaacctcgccatcaactacgatctccccgccgatgccgactcttacctccat
cgtgtcggtcgtgctggtcgtttcggtaccaagggtcttgccatctccttcgttaccact
gaccaggacaaggaggtcctcaaggctattgagaagcgcttcgaggttgctcttcctgag
ttccccaaggaaggtatcgatgcctccacctacatggcttcctaa
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