Neurospora crassa: NCU09254
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Entry
NCU09254 CDS
T01034
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K14781
ATP-dependent RNA helicase DHR2 [EC:
5.6.2.6
]
Organism
ncr
Neurospora crassa
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncr03009
]
NCU09254
Enzymes [BR:
ncr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCU09254
Ribosome biogenesis [BR:
ncr03009
]
Eukaryotic type
90S particles
Helicases
NCU09254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
ABC_tran
Cas3-like_C_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
3880838
NCBI-ProteinID:
XP_964689
UniProt:
Q7SF56
LinkDB
All DBs
Position
I:complement(9388500..9391246)
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AA seq
840 aa
AA seq
DB search
MSRKRKAESGEVLKIGNKTISLEGYLTKKPKTASTPSTSTSDNNTPAPSTENDTTTTATD
PKEFKPSRPLTGDPSLFATRRALPLYLYQDRIRSILSKKDVLVLVGETGSGKSTQVPQFL
YQERWCQRRRVKVKTKVLDKDGNEVLEEGGKAKTREETVNVGGVIAITQPRRVAATTLAG
RVAKECGTPLDTSGRGTGFKGRGPKGKDGKGPKGGKEGEEWDEEKDVVEEMGKNNGGDEE
VIEENGNEKKDRKDQEKGLVGYSVRFDHRVPPGTKIKYVTEGMLLQELLRDPHLRQYSAI
IVDEIHERSVDVDLLSGFLKQIVTGDKAGRGGIPLKVVVMSATAQVERIKKFFSSDDSLK
KGTSGEEVEYLEIEGRQFPVEVIHEPKPVPDIQEALLKTVFKIHTQEPLSDKHGKKDILC
FLTGQEEIEAAQRLIEEFAETLDPKVPKVKVFPLFGQLSMEAQHEAFQPIKHPFTRKIVL
ATNIAETSVTVPGVRYVVDCGKAKVKQYRPRLGMESLLAKPISKSSAIQRTGRAGREGPG
KCFRLYTADTFATLPKTDLPEILRTDVLGAVLTMKARGIDDVLSFPLMDRPELEAVENAL
VHLHVLGALGDDGRITDTGRKMVLFPVTAPYARVLLAAADPRYDCLLEAIDIISCITAGD
DIFMQVRSEEDKEAVDVYRKELQRREGDLITYLNTMQRFVSTPSADRGTFCKQRRINVRN
MRQALNIRKQLRSLSVKNKMLAEFPAPDAEVTYQPVSPETAERILKAFLKGFAMKTAVLA
PDASYVTAHGKHVVAIHPSSSLHGVKREAIMFLEHVYTQKNYAKKVSAIQAGWIAEALAV
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcaaaagaaaagccgaatccggcgaagtcctcaaaatcggcaacaaaaccatc
tccctcgaaggctacctcaccaagaaaccaaaaactgccagcaccccttcaacctcgaca
tcagacaacaacaccccagcaccatcaaccgaaaatgatacaacgacgacagcaacagac
cccaaggagttcaagccctctcgccccctcacaggagatccctccctgttcgccacccgc
cgcgccctcccgctctacctctaccaagaccggatccgctccatcctctcgaaaaaggac
gtcctggtactagtgggtgagaccggttcgggtaaatctacccaggtcccgcagttcttg
taccaggagcggtggtgtcagcgacggagggtcaaggttaagaccaaggtgttggataaa
gatgggaatgaggttctggaggagggtggtaaagcaaagaccagggaggagacggttaat
gtcggtggagtgattgcgattacccagccgagaagggtagctgctaccacgcttgcgggg
cgtgtggcgaaggagtgcgggacgccgttggatacgagtgggagggggacagggttcaag
ggacggggaccgaaagggaaggatggaaagggaccgaaaggtgggaaggagggagaggag
tgggatgaggagaaggatgtggtggaggagatggggaagaataatggtggtgatgaggag
gtgattgaggagaatgggaatgagaagaaggacaggaaagaccaggagaagggtctggtt
ggttattcagtccgtttcgaccatcgagtaccaccggggacgaagatcaagtacgtgacg
gagggtatgttgctgcaggaactgctgagggacccgcatctacgacaatactcggccatc
atcgtggacgaaatccacgagcgcagtgtggatgtcgatttactatctggtttcctcaag
cagatcgtcacgggcgacaaggccggtcgtggaggaatcccgctcaaggtggtggtcatg
agtgctacggcacaggtcgaaagaatcaagaaattcttttctagcgacgacagtcttaag
aagggaacatccggggaggaagtggaatatctcgagatcgaaggccgacagttcccggtc
gaagtcatccacgagcccaaacctgttccagacatccaggaggcactcctcaaaaccgtc
ttcaagatccacacccaagagccgctctccgacaaacacggcaagaaggacatcctgtgt
ttcttgacaggtcaagaagaaatcgaagccgcccagcgcctaatcgaagaattcgccgaa
accctcgaccccaaagtgcccaaagtcaaagtctttcccctcttcggccaactctccatg
gaagcccagcacgaagccttccagcccatcaaacaccccttcacgcgcaagatcgtgcta
gccaccaacattgccgaaacctccgtcaccgtccccggcgtgcgctacgtcgtcgactgc
ggcaaagccaaagtcaaacaataccgtccccgtctcggcatggaatcgctgctcgcaaaa
cccatctccaaatcctccgccatccaacgaaccggtcgtgccggccgtgaaggccccggc
aagtgcttccgtctctacacagccgacaccttcgccaccctgccaaagacggacctcccc
gagattctgcggaccgacgtcctcggcgccgtcctgacaatgaaagcccgcggcatcgac
gacgtgctctccttcccgttgatggaccgtccggaactcgaagccgtcgaaaacgctctt
gtacatctacatgtgctcggcgcgctaggcgacgacggccgcatcaccgacaccggccgc
aaaatggtcttgttccccgtgactgcgccctacgcgcgcgtcctgctcgcggccgctgac
ccgcgctatgactgtctgctggaagccatcgacatcatttcgtgcatcacggccggcgac
gacatcttcatgcaagtccgctcggaagaagacaaggaagccgtggacgtgtacagaaaa
gaactccagcgccgcgagggcgatttgatcacgtacctgaacaccatgcaacgcttcgtt
tccacgccctcagccgaccgtgggacgttctgcaaacaacgccggatcaatgtgcggaat
atgcggcaggcgctgaatatcaggaaacaactccggtcgctgtcggtcaagaataagatg
ctggcggagtttccagccccagatgcggaagtgacgtaccagcctgtgtcgccggagacg
gcagagaggatcctcaaggcgttcttgaaggggttcgcgatgaagacggcggtgctggcg
cccgatgcgagttatgtgactgcccatgggaaacatgtggttgctattcacccgagtagt
agtttgcatggggtcaagagggaggccatcatgtttttggagcatgtgtatacgcaaaag
aattatgcaaagaaggtgagcgccattcaggcggggtggattgcggaggcgttggctgtt
tga
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