KEGG   Neurospora crassa: NCU11251
Entry
NCU11251          CDS       T01034                                 
Name
(RefSeq) pre-mRNA splicing factor
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ncr  Neurospora crassa
Pathway
ncr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCU11251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncr03041]
    NCU11251
Spliceosome [BR:ncr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    NCU11251
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd PRP4 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 WDR54 Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_Vps41 Beta-prop_DCAF4 Tricorn_2nd PROPPIN
Other DBs
NCBI-GeneID: 5847683
NCBI-ProteinID: XP_011393319
UniProt: V5IPW0
LinkDB
Position
I:complement(4872408..4874484)
AA seq 506 aa
MDLDSVPLDRDYDIPGAGAGIAPEKASVLLSQFERKRLAASIAVPTDDGRVRAKLREMGE
PVTLFGEGPADRRDRLRELMTQQAEKGGQESADVEMRDAENEEDEAGDQEEEFYTTGSPE
LLQARIDIAHYSIPRAKKRIEFQKKESTIPLRTHVKHRKEIKEKLQGFELQGSQTAGERH
ISMTRISPDGNMVATGNWGGQVKLIEIPTLEPRKTLRGHTNKVSGLCWMPGATLPERNVS
PDTVNLASGGAEGQIHLWSLNQDTPLRTLSGHSQRVCRVEFHPSGKYLASASEDTSWRMW
DVETGTELLLQEGHSRGVYAVSYNSDGSLLASAGLDSIGRIWDLRTGRTAMILDGHQDGH
IKPIYGLDWGSDGYRVLTASADGWIKCWDVRKVERIGGIGAHTSAVADVRWFKGLDDPLE
GVPPGEDEKGMQIPKKSGTFMVSAGFDHKVNIFSADDWALVQSLSGHTGPVASVDVSRDG
KWIVSGGHDRTVKLWGRNDSRSLYDS
NT seq 1521 nt   +upstreamnt  +downstreamnt
atggatctagactccgtccccctcgatcgcgactacgacatccccggtgctggggctggt
attgccccagagaaggcctccgttcttctatcgcagtttgaacgaaaacgattagcggct
tcgattgctgttcctaccgacgatggccgggtacgagccaaattgcgagagatgggcgag
cctgtcaccctcttcggcgagggtccggcagacagacgcgacagattacgagaactcatg
acacaacaagccgaaaagggaggtcaggaaagtgccgatgtggagatgcgggacgccgaa
aacgaggaagatgaagccggcgaccaagaggaggaattttacactactggaagcccggaa
ctgctccaggcccgcatcgacatcgctcactactcaatcccgagagctaagaagcgcatc
gagttccagaagaaggagtccaccatcccactgcggacacatgtcaaacaccgaaaagag
atcaaggagaagcttcaagggtttgaattgcaaggcagtcaaacggcaggagagcggcac
atcagcatgacaaggatctcgcctgatggaaacatggtcgcaactggcaattggggcgga
caggtcaaactcatcgaaatcccaacccttgagccaaggaagactttgaggggccacacc
aacaaagtcagcggcctatgctggatgcctggagctacactgccggagcgcaatgtttct
cccgacacagtcaatctcgcttccggaggagcggaaggccagattcatctctggtctttg
aaccaagacacgcctttgagaactctctcaggacactcgcaacgagtatgtcgtgtagag
ttccatccatcgggcaagtatctggcttctgcctcagaagacacgtcatggaggatgtgg
gatgttgaaaccggcaccgagctccttctccaggaaggtcactctcgcggtgtatacgct
gtcagttataacagtgacggatcgctactcgctagcgcgggtttggacagtatcggaaga
atctgggatctgcggacaggacggactgccatgattctagatgggcatcaggacggccat
atcaagcctatttatggtttggactggggctcggacggttacagggtgctcacggcgtct
gctgatggttggatcaaatgctgggacgttagaaaagtggaaagaattggaggcattggt
gcccatacaagtgcagtggccgacgtgcggtggttcaaggggttggatgacccgttggaa
ggagtgcctcctggcgaagatgaaaagggaatgcaaattcccaaaaaatccggcaccttt
atggtgtcggcaggctttgaccacaaggtgaacatattttccgctgacgactgggccttg
gttcagtctctcagcggccacacagggcctgttgcgagtgttgacgttagccgggatgga
aaatggattgtaagcggtggccatgaccggacggtcaaactttggggaagaaacgactcc
aggagcttgtatgattcctga

DBGET integrated database retrieval system