KEGG   Neurospora crassa: NCU11372
Entry
NCU11372          CDS       T01034                                 
Name
(RefSeq) hypothetical protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
ncr  Neurospora crassa
Pathway
ncr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCU11372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU11372
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NCU11372
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     NCU11372
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 5847192
NCBI-ProteinID: XP_011394347
UniProt: V5IQ17
LinkDB
Position
IV:2288631..2291669
AA seq 485 aa
MNRPGAVPQSLRGMSGFGGQQQQPQQSGRGVANRLPNGKLGAVSGGSGWAFGSGMPMGGS
PGVPPGSARQLGGGNVSFAQSLSGSQPATPLDLSEFPTLSNTSQLSTANQASMWSTGARN
LGGAVHRGPSTPLSQQGQQDDFFSSRQQSAQGAFRFGNQGNSGQTSQTPSSVTDDFPPLN
RSANGELGGMPGLGFGSTPSIHPNRTNNGLLNALTGNTRTTDGRSPTAIGRPHDQRSPVN
EEEGRQKPPVYREDGMASRSSVGDAVSQAIGTRNPLGAIGNDPPSAKGKEEDRGRTNEVQ
DPLEGMPAIEKFGLKGLRTLMNNFPDYNSLIIGIDPSSLGLELNSSELYSTQIYSILDDV
PPRPAVPKFKIPECYMVKNVQPIEAKIQSFNEETLMWIFYSCPGDIKQQLAAAELTTRNW
RWHKKLQVWLTKDEMGNTAQLSPAHERGYYIVWDTVNWHKERREFTLYYCDLETNLGVPM
PAIGA
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgaatcggccaggggcagttccccaatctttgcgcggcatgtctggcttcggaggacaa
caacaacaaccacaacagtctgggcgtggcgtagcgaacaggttaccgaacggaaagcta
ggggccgtgagcggcggttctggctgggcgtttggctcgggcatgcccatgggcggcagt
cctggtgttcctcctggttctgccagacagttgggcggcgggaatgtcagctttgcgcaa
agtctaagtgggtcacaaccagcgaccccgttggatctttcagagtttcccactttgtcc
aacacgtcgcagttgtcgacggcaaatcaggcttcaatgtggtccacgggggctcgtaac
ctcggaggagcagtacaccgcggtccttctacaccgctttcgcagcaagggcaacaggat
gactttttctcgtctcgacaacaatcggcccaaggagctttcaggtttggaaaccaaggg
aactcggggcaaacatcacaaacaccatctagtgttacggacgactttcctccgttgaac
aggagtgcaaacggcgaattaggtggcatgccaggtttgggattcggatctactccatcg
attcaccccaatcggacaaataacggcttgttgaacgcgctgacagggaacacgcgcacc
acagacgggcgttcaccaactgcaattggacgcccgcacgaccaaaggagcccggtcaac
gaggaagaaggacgccaaaagccgccagtgtatcgggaggacggtatggcttcacgctct
tcggtgggcgatgccgtttcgcaagcaattggtaccaggaacccgctcggcgcaattgga
aacgatcctccatctgctaagggcaaggaggaggataggggccgtaccaacgaagtccaa
gatccgttggagggcatgcccgccatcgaaaagtttggcttgaagggtttgcgcaccttg
atgaataacttccccgactacaactccctcattatcgggatcgatccttccagtttaggg
ttggagctgaactcttctgagctgtattccacgcaaatctactctatactggacgatgtc
cctcccaggccggctgtgccaaagttcaagatacccgaatgctacatggtcaagaacgta
cagcctattgaggccaagattcagagctttaatgaggagactttgatgtggattttctac
agctgcccgggcgacatcaagcagcaactggctgcagctgagctaactacgcggaactgg
agatggcacaagaagcttcaagtgtggcttaccaaggacgagatgggtaatacggctcaa
ctaagcccagctcatgaacggggttactacatcgtatgggacaccgtgaactggcacaag
gagcggagagagttcactttgtattattgcgacctggagaccaacctcggcgttccaatg
ccagcaataggagcataa

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