Neurospora crassa: NCU11372
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Entry
NCU11372 CDS
T01034
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ncr
Neurospora crassa
Pathway
ncr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCU11372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU11372
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCU11372
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NCU11372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
5847192
NCBI-ProteinID:
XP_011394347
UniProt:
V5IQ17
LinkDB
All DBs
Position
IV:2288631..2291669
Genome browser
AA seq
485 aa
AA seq
DB search
MNRPGAVPQSLRGMSGFGGQQQQPQQSGRGVANRLPNGKLGAVSGGSGWAFGSGMPMGGS
PGVPPGSARQLGGGNVSFAQSLSGSQPATPLDLSEFPTLSNTSQLSTANQASMWSTGARN
LGGAVHRGPSTPLSQQGQQDDFFSSRQQSAQGAFRFGNQGNSGQTSQTPSSVTDDFPPLN
RSANGELGGMPGLGFGSTPSIHPNRTNNGLLNALTGNTRTTDGRSPTAIGRPHDQRSPVN
EEEGRQKPPVYREDGMASRSSVGDAVSQAIGTRNPLGAIGNDPPSAKGKEEDRGRTNEVQ
DPLEGMPAIEKFGLKGLRTLMNNFPDYNSLIIGIDPSSLGLELNSSELYSTQIYSILDDV
PPRPAVPKFKIPECYMVKNVQPIEAKIQSFNEETLMWIFYSCPGDIKQQLAAAELTTRNW
RWHKKLQVWLTKDEMGNTAQLSPAHERGYYIVWDTVNWHKERREFTLYYCDLETNLGVPM
PAIGA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggccaggggcagttccccaatctttgcgcggcatgtctggcttcggaggacaa
caacaacaaccacaacagtctgggcgtggcgtagcgaacaggttaccgaacggaaagcta
ggggccgtgagcggcggttctggctgggcgtttggctcgggcatgcccatgggcggcagt
cctggtgttcctcctggttctgccagacagttgggcggcgggaatgtcagctttgcgcaa
agtctaagtgggtcacaaccagcgaccccgttggatctttcagagtttcccactttgtcc
aacacgtcgcagttgtcgacggcaaatcaggcttcaatgtggtccacgggggctcgtaac
ctcggaggagcagtacaccgcggtccttctacaccgctttcgcagcaagggcaacaggat
gactttttctcgtctcgacaacaatcggcccaaggagctttcaggtttggaaaccaaggg
aactcggggcaaacatcacaaacaccatctagtgttacggacgactttcctccgttgaac
aggagtgcaaacggcgaattaggtggcatgccaggtttgggattcggatctactccatcg
attcaccccaatcggacaaataacggcttgttgaacgcgctgacagggaacacgcgcacc
acagacgggcgttcaccaactgcaattggacgcccgcacgaccaaaggagcccggtcaac
gaggaagaaggacgccaaaagccgccagtgtatcgggaggacggtatggcttcacgctct
tcggtgggcgatgccgtttcgcaagcaattggtaccaggaacccgctcggcgcaattgga
aacgatcctccatctgctaagggcaaggaggaggataggggccgtaccaacgaagtccaa
gatccgttggagggcatgcccgccatcgaaaagtttggcttgaagggtttgcgcaccttg
atgaataacttccccgactacaactccctcattatcgggatcgatccttccagtttaggg
ttggagctgaactcttctgagctgtattccacgcaaatctactctatactggacgatgtc
cctcccaggccggctgtgccaaagttcaagatacccgaatgctacatggtcaagaacgta
cagcctattgaggccaagattcagagctttaatgaggagactttgatgtggattttctac
agctgcccgggcgacatcaagcagcaactggctgcagctgagctaactacgcggaactgg
agatggcacaagaagcttcaagtgtggcttaccaaggacgagatgggtaatacggctcaa
ctaagcccagctcatgaacggggttactacatcgtatgggacaccgtgaactggcacaag
gagcggagagagttcactttgtattattgcgacctggagaccaacctcggcgttccaatg
ccagcaataggagcataa
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