Naumovozyma castellii: NCAS_0A03680
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Entry
NCAS_0A03680 CDS
T02233
Symbol
NCAS0A03680
Name
(RefSeq) polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
ncs
Naumovozyma castellii
Pathway
ncs03015
mRNA surveillance pathway
ncs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCAS_0A03680 (NCAS0A03680)
09123 Folding, sorting and degradation
03018 RNA degradation
NCAS_0A03680 (NCAS0A03680)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0A03680 (NCAS0A03680)
03041 Spliceosome [BR:
ncs03041
]
NCAS_0A03680 (NCAS0A03680)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
NCAS_0A03680 (NCAS0A03680)
mRNA cycle factors
Stress granule specific factors
NCAS_0A03680 (NCAS0A03680)
Spliceosome [BR:
ncs03041
]
Complex C
Other components
Complex C specific factors
NCAS_0A03680 (NCAS0A03680)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RBD_DEAH11
RRM_10
RRM_Nup35
RBD_RDR6
RRM_3
RRM_occluded
xRRM
DUF4523
Motif
Other DBs
NCBI-GeneID:
96900413
NCBI-ProteinID:
XP_003673315
UniProt:
G0V636
LinkDB
All DBs
Position
1:complement(738305..740032)
Genome browser
AA seq
575 aa
AA seq
DB search
MSDITEKTVEQLENLKISESEDQPSTTTSTETSPASLYVGELDPTVSEALLYDIFSPIGS
VSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQLNYTPIKGRLCRIMWSQRDPALRKK
GSGNIFIKNLHPDIDNKALFETFSVFGNILSSKIATDETGKSKGFGFVHFEHESSAKEAI
DALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNINLETTDEEFNELFAKYG
NVLSSSLEKTEDGKLKGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVSRAQKKYERMQE
LKKQYEASRLEKMAKYQGVNLFVKNLDDSIDDEKLKEEFAPYGTITSVRVMRTDNGKSKG
FGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARTQMRYQQAT
AAAAAAAAGIPGQFMPPMFYGVMPPRGVPFNGPNPQQMNGVPPQQFRNGPGYGMPPQGGF
PRNGVPNQFYQKNQRQALGEELYKKVSAKNADEEAAGKITGMILDLPPQEVVSLLENDEL
FEQHFKEASAAYESFKQEQEQQQAQPVEQESAPQA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatattactgaaaagacagtggaacaattggaaaacttgaaaatcagcgaatct
gaagatcaaccatccactactacatcaacagaaacctctcctgcctccttatacgttggt
gaactggacccaactgtttctgaagctttattgtacgatatcttctctccaattggttca
gtctcttccatccgtgtttgtcgtgatgctgtcaccaagacttccttaggttacgcatac
gtcaacttcaacgaccatgaagctggtaagaaggctattgaacaattaaactacactcca
atcaagggcagattatgtcgtatcatgtggtctcaacgtgatccagctttgagaaagaag
ggttcaggtaacattttcattaagaacttacacccagatatcgataacaaggctttattc
gaaactttctccgtctttggtaacatcttgtcttctaagattgccactgatgaaactggt
aagtccaagggtttcgggtttgttcatttcgaacatgaaagctctgccaaggaagctatt
gatgctttgaatggtatgttgttgaacggtcaagaaatctatgtggctcctcatttgact
agaaaggaacgtgattctcaattagaagaaactaaggctcacttcactaatgtttacgtc
aagaatattaatttggaaaccactgatgaagaattcaacgaattatttgccaagtacggt
aatgtcttatcctcttctttggagaagactgaagacggtaagttgaagggtttcggtttc
gtcgattttgaaaagcatgaagatgctgccaaggctgtcgaagaattaaacggtactgaa
ttcaaggaccaaactttattcgtttctcgtgctcaaaagaagtatgaacgtatgcaagaa
ttaaaaaagcaatacgaagcttccagattggaaaaaatggctaaataccaaggtgttaac
ttatttgtcaagaacttggatgattctattgatgacgaaaaattaaaggaagaattcgct
ccatatggtaccatcacctctgttagagttatgagaactgataatggtaaatccaagggt
ttcggtttcgtctgtttctctaccccagaagaagctactaaggccattactgaaaagaac
caacaaattgttgctggtaagccattatacgttgctattgctcaaagaaaggatgttaga
cgttctcaattggctcaacaaattcaagctagaactcaaatgagataccaacaagctact
gctgctgctgccgcagccgctgccggtatcccaggtcaattcatgccaccaatgttctac
ggtgttatgccaccaagaggtgttccatttaacggtccaaacccacaacaaatgaatggt
gttccaccacaacagttcagaaatggtccaggttatggtatgccaccacaaggtggattc
ccaagaaatggtgttccaaaccaattctaccaaaagaaccaaagacaagccttaggtgaa
gaattatacaagaaggtctctgctaagaacgccgacgaagaagctgctggtaagatcact
ggtatgattctagatttaccacctcaagaagttgtctctttgttagaaaatgacgaattg
tttgaacaacatttcaaggaagcttccgctgcttacgaatccttcaagcaagaacaagaa
cagcaacaagcccaacctgttgaacaagaatctgctcctcaagcttaa
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integrated database retrieval system
