Naumovozyma castellii: NCAS_0A03870
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Entry
NCAS_0A03870 CDS
T02233
Symbol
NCAS0A03870
Name
(RefSeq) TATA-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ncs
Naumovozyma castellii
Pathway
ncs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCAS_0A03870 (NCAS0A03870)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncs03000
]
NCAS_0A03870 (NCAS0A03870)
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0A03870 (NCAS0A03870)
Transcription factors [BR:
ncs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
NCAS_0A03870 (NCAS0A03870)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
NCAS_0A03870 (NCAS0A03870)
RNA polymerase III system
TFIIIB
NCAS_0A03870 (NCAS0A03870)
RNA polymerase I system
SL1/TIF-1B
NCAS_0A03870 (NCAS0A03870)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
HmuY
Motif
Other DBs
NCBI-GeneID:
96900431
NCBI-ProteinID:
XP_003673333
UniProt:
G0V654
LinkDB
All DBs
Position
1:complement(785716..786474)
Genome browser
AA seq
252 aa
AA seq
DB search
MSEEETRFSEFKEANKIVFDPNTRQVWDNQGTTGNVATNNGTSVKPEAGSMQEAQANAKQ
EQEDQDEDNSATSGIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIRE
PKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKF
PIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFE
AIYPVLSEFRKM
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaggaaacccgtttcagtgagtttaaggaggcgaataaaattgttttcgat
ccaaatacaagacaagtttgggacaaccagggaaccacaggcaatgttgccacgaacaat
ggaacgagcgtaaagcctgaagcagggagtatgcaggaagctcaagcgaatgcgaaacaa
gaacaagaggaccaagatgaggataattcagccacttcagggatagtaccaactctacag
aatattgttgctacagtgaacctgggttgtcggttagatttaaagactgtagcacttcat
gctcgtaatgctgaatataatccaaaacgttttgctgcagtgattatgcgtattagagaa
cctaaaaccacagctttgattttcgcatccgggaaaatggtcgttacgggtgctaagagt
gaagatgattcaaaactagccagtagaaaatatgcaaggattatccaaaaaattggtttt
gctgccaagtttactgatttcaaaattcaaaatattgttggttcttgtgatgttaaattc
cctattagattagagggtttggccttcagtcatggaactttctcctcatatgaacctgaa
ttattcccaggtttaatttatagaatggtgaaaccaaagattgtgcttctaattttcgtc
tcagggaaaattgttttaaccggtgccaaacaaagagaagaaatttatcaggcatttgaa
gctatttaccctgtgctgagtgaattcagaaagatgtga
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