Naumovozyma castellii: NCAS_0A08670
Help
Entry
NCAS_0A08670 CDS
T02233
Symbol
NCAS0A08670
Name
(RefSeq) mismatch repair ATPase MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ncs
Naumovozyma castellii
Pathway
ncs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCAS_0A08670 (NCAS0A08670)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0A08670 (NCAS0A08670)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NCAS_0A08670 (NCAS0A08670)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
PhoU
GBP_C
RsbRD_N
Motif
Other DBs
NCBI-GeneID:
96900904
NCBI-ProteinID:
XP_003673806
UniProt:
G0V7H7
LinkDB
All DBs
Position
1:complement(1713724..1716603)
Genome browser
AA seq
959 aa
AA seq
DB search
MTSTRPELKFSDLSEERGFYKRYITLPEKPSTTLRIVDKGDYYTVIGNDAIFVAENVYHT
LSVLKDCHLDSVTSKQFQEALKYVTISPQVVSTLLKTCLLDLGYKIEIYDKLWKLQKSAS
PGNVEQVNDLMNIAIDSSIVIASLKLQVNSKEGNSVLGVAFIDTSNYKIGMLDIVDNEVY
SNLESFLIQLGVRECIVQDLTNNENTSREFKKIIGVIDRCGSVVTLVKNSEFSEKDVEMD
LTKLINNELSLSLPKKYSNLAMGACNALLGYLELLNEQDQLGKFELIEHSLQEFMKLDAS
AIKALNLFPQGPVQPFGPTPTASFGTASGGKIASLFQLLNNCKTNAGIRLLNEWLKQPLT
DLARIEQRHDLVDYLIDQLELRQMLQTDTLPMIPDLRRLTKKLNKNGNLEDVLKIFQFSQ
KIPEVAQLLESFLEDDNSNSKVKSLIKMVWLDPLTSHLDPLSKFQEMVETTVDLEAFETN
NQFMIKVEFNEELAKIREQLDSLREQINAIHLNAADDLGFDPDKKLKLENHHLHGWCMRL
TRNDAKELRKHRNYLELSTVKAGIFFSTKELKEIAQETIKLQKDYDRLQSALVKEIVGIT
VTYTPVLEKLSQVLAHLDVLCSFAHVSSYAPIPYVRPKMHPFDSTRRTHLVGSRHPVLEM
QDDLTFISNDVDLVDGEGDFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAI
VDAILCRVGAGDSQLKGVSTFMVEMLETASILKNATKNSLIIVDELGRGTSTYDGFGLAW
AIAEHIASKIGCFALFATHFHELTSLSDKFSNVKNMHVVAYIEKGTDQLESDDITLLYKV
EPGISDQSFGIHVAEVVQFPDKIVKMAKRKASELEDLKKGNEDLKKAKLTVREINDGNKH
LKTLLKDWVKKVKEEGLDDPSKLSEEACQEKIQELLRSLAEEAKVSEDKYLKFISEVLL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaccagacctgaacttaaattttctgatttgtcagaagaacgtggattctac
aagagatacattaccttaccagaaaagccttcaactactttaaggatcgtcgataaagga
gattattatacagtcattggaaacgacgccatctttgttgctgaaaatgtctatcataca
ttatcagtgttaaaggattgtcaccttgattctgtaacatcaaaacaattccaagaggca
ttaaaatatgttactatatctccacaagttgtcagtactctattaaagacatgtctactt
gatttaggatataagattgaaatatacgacaagttatggaaattacagaagagtgcctcc
ccaggtaatgtcgaacaagtaaatgatttgatgaatattgccattgattcatctattgtc
attgcgagtttgaaattacaggttaattcgaaggaagggaattctgtcctaggggtagct
tttattgatacaagtaattataagattgggatgttagacattgttgataacgaagtttat
tcaaacctggaaagttttttgattcagctcggtgtaagagaatgtattgttcaagattta
accaacaatgaaaatactagtagagaattcaaaaaaataattggtgtgattgatcgttgt
ggtagtgttgttactttggttaaaaattctgaattttctgagaaggatgttgaaatggat
ttaacaaaattgattaacaatgaactgtcattatcgttgcccaagaaatattccaatttg
gcaatgggggcatgtaatgctttacttggttatctggagctattgaatgaacaggatcaa
cttgggaagttcgaattgattgagcattccttacaagaatttatgaagctagatgcctct
gctattaaagccttaaatttgttcccacaaggacctgtccaaccgtttggaccaactcca
actgcatcctttggtaccgcctctggtggtaagattgcatcattatttcaacttttgaat
aattgtaagacgaatgcaggtataaggttattaaatgaatggttaaagcaacctctcaca
gacctcgctcgtattgaacaaagacacgatcttgtcgattacttaatcgatcagttggaa
ttgagacagatgttacaaacggatactttacccatgataccagatttacgtcgtcttaca
aagaaattaaataagaatggaaatttggaagatgtgttgaagattttccagtttagtcaa
aaaatcccagaagtagctcaattactggaatcatttcttgaagatgataattccaattcc
aaagtgaagagtttaataaagatggtatggctagacccgttaacttcacatttagatcca
ctatccaaatttcaggaaatggtggaaacaacagttgatttagaagcatttgaaactaac
aatcagtttatgattaaagttgaattcaatgaagagttggccaagattagagaacaatta
gattccttaagggaacaaattaacgccatccatttgaacgcagctgatgatcttggattt
gatccagataagaagcttaaattagagaatcatcatctgcatggttggtgtatgagattg
actcgtaacgatgccaaggagttacgtaaacatagaaactatttggagttatctaccgtg
aaagccggtatatttttcagcacaaaggaacttaaagaaattgctcaagaaactataaaa
ttacaaaaggattacgatcgattacaatccgcactggtgaaggaaattgttggtattacc
gtcacttacacgccagttctagagaaactttcacaagttcttgctcatctggatgtctta
tgttcatttgcacacgtttcttcgtatgcaccaattccttatgtcagaccaaagatgcat
ccatttgattccaccagaaggacccatttagtgggatcacgtcaccctgtattagaaatg
caagatgatcttacatttatatccaatgatgttgatttagttgatggcgaaggagatttt
ctaattattacaggtcctaatatgggtggtaaatccacatacattagacaagttggtgtg
atatcattgatggcccaaattggatgttttgtcccctgtgaagaggctgaaattgcaatt
gtggatgccattctatgtagagttggtgctggtgactcgcaattgaaaggtgtatctacg
ttcatggtggaaatgttagaaactgcatccatcttgaagaatgccaccaagaattcgtta
attatcgtggatgaattaggacgtggtacgagtacatatgatgggtttggtttagcatgg
gccattgctgaacatattgccagtaagattggctgttttgcattatttgccacacatttt
catgaattaacatctttatctgataaattctccaatgttaaaaatatgcatgttgtagca
tatattgaaaagggtacagatcaattggaaagtgatgatattacgttactgtacaaagtg
gaacctggtatttcagatcaatcatttggtatccatgtggcggaagttgttcaattccca
gataaaatagtgaagatggccaagagaaaggccagtgaattggaagacttgaagaagggg
aatgaagacttaaagaaggccaagttgacagtccgtgaaattaatgatgggaacaaacat
ttgaaaactctcttgaaagattgggtgaaaaaagtgaaggaagaggggcttgatgaccct
tcaaagctatcagaagaggcatgtcaggagaagattcaggaattactacgcagtctggca
gaagaagccaaagtgagtgaggataaatacctgaagtttatttcggaggtgttactctaa
DBGET
integrated database retrieval system
