Naumovozyma castellii: NCAS_0A09440
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Entry
NCAS_0A09440 CDS
T02233
Symbol
NCAS0A09440
Name
(RefSeq) DNA helicase SRS2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03420
Nucleotide excision repair
ncs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCAS_0A09440 (NCAS0A09440)
03430 Mismatch repair
NCAS_0A09440 (NCAS0A09440)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0A09440 (NCAS0A09440)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCAS_0A09440 (NCAS0A09440)
DNA repair and recombination proteins [BR:
ncs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCAS_0A09440 (NCAS0A09440)
MMR (mismatch excision repair)
Other MMR factors
NCAS_0A09440 (NCAS0A09440)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
DEAD
GatB_Yqey
ResIII
Motif
Other DBs
NCBI-GeneID:
96900981
NCBI-ProteinID:
XP_003673883
UniProt:
G0V7Q4
LinkDB
All DBs
Position
1:complement(1873689..1877132)
Genome browser
AA seq
1147 aa
AA seq
DB search
MSNVNTLKESLPSTNDDLIRNILLSLNTQQRLAVEYNHEKALQVIAGPGTGKTKVLISRV
AYLLLKEKLNPQDIIVTTFTNKAAKEMIDRLTKLLRGTHIRVDDLMIGTFHSICVKVLHQ
YGSSIGLSKQWRIADESEIDTIIHDLIANMPDQIRDYSNSMTRKVNLCLPKRGSSGDDEW
AVSPKLVKRQISRLKSSAVVPDIYKEDPNHDSALAYFYENFQNELTKINALDFDDLLMNA
FLLMTKERCLPHIKHVLVDEFQDTNEIQMDLTFLFAKANHHLSRGITVVGDPDQSIYAFR
NALAYNFQTMVQKCPIECARIVLIENYRSSQSILDTSERLITQQTEGRQNRQPLHAQFNC
EFPPVYINFPASFLQGPSLIRELLYLKALPNLFTYKDFSILVRQRRQIKPIETALIEYRI
PYKIIRGVAFWELKEITAMLNLIKCIYSDNEKNAIIASLLYPPRGLGQASADKIKGLMDS
KAGITTALDTLREINENKILSDIPTKGYTVIADFVRMLNACKLLFDTKPVNEALDAIFEK
LFEMSGLKQEYLYFDGKKKKNLDISNLEADYTNKRYLNVKLLKTYFVGKLQENKPADENP
TSSSNADSIRDIDTSYDAERNSMTVLERIREFFNSLTLYTSDLPDLSDFTENESQKFRRE
ENERDGYVTISTIHGAKGLEWPVVFIPGCEEGIIPSIFSGENDADQDGEDDPETDEDNGS
DIDKKIQIESPSKRRVKSIDEAVHEERRMFFVAQTRAKYLLYLSSVTSEGPRPSAPSRFL
TPDLLGTMTDEQKVFKNLEMIMKLYRTLKKEPPVASQKDFSLKVLLKDYSQFVSARREHL
IWNGSPCRNTSNLDLSKNIVTPPKLSLEFTTAAQQLHSTKGVTRNSVNQTKRQMLTKSPK
KSYAPSITPSTPSPTKLYAPTTSSGDISPKPAKDYAPGYKSFRRAPNTLSPRKLEYSPSK
SKTTKISLVTNSPERLVKRSNENSFLSFTDKPKSTIGTTPSKYWNEPAIKKEYNELTVVK
SESTTGDLPMALKSKQSKPPNKNCRVTKVKEEFDSKKESSYDVNNTTAAELLHDPNDLTI
DDRPILTNAKTLADAIRKPSRKNLKKENINNGKLKKEGQPNQMDIFSQLSRAKKKTKTNK
GEIIIID
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgtcaatactctgaaagaatctctccccagtacgaatgacgacctgatacga
aatattttattatcattaaatactcagcagcgactagctgtggaatacaaccatgaaaag
gcattacaagtcattgcaggaccaggtacggggaagaccaaagttttaatatccagggtg
gcttatttacttttaaaagaaaaattgaacccccaagacatcattgtaaccacatttaca
aataaagctgccaaggaaatgatagatagactgacgaaattattacgtggaactcacata
agggtcgatgatttgatgatcggcacgtttcatagtatatgtgttaaggttttacatcaa
tatggatcatctattggattatccaaacagtggagaatagcagatgaatcagagattgat
accattatacacgatttgattgcaaacatgcccgatcaaatcagagattattccaactca
atgactaggaaagtcaatctttgcctcccgaaaagaggaagctctggcgatgatgagtgg
gctgtaagtcctaagttagtgaaaaggcaaatatcgaggctgaaatcgagtgctgttgtt
cctgacatatataaagaagatcctaatcacgattctgcacttgcatatttctacgaaaac
tttcaaaatgaattgacgaagattaatgctctagattttgatgatttattgatgaatgct
ttccttttaatgaccaaagaaaggtgcttaccacacattaagcatgttttagttgatgaa
tttcaagatacgaacgaaattcaaatggatctaacatttttatttgctaaagcaaatcac
catctatcgagaggtataactgttgtaggtgaccctgatcagagcatttatgcttttaga
aacgcacttgcatacaatttccaaacaatggtgcagaaatgtcctatagagtgcgcacgt
atagttctgatagaaaattaccgttcctcacaaagcattctggatacaagcgaaaggctg
atcactcagcaaaccgagggacgtcaaaatcgacaaccacttcatgcccaattcaattgt
gaattccccccagtttatattaattttcccgcatcatttctccagggcccatctttaatt
agagaattgctctatttaaaggctttaccaaacttattcacttacaaagatttttcaata
ttagtacgacaaagaagacaaatcaaaccaatcgaaacagctcttatagaatatagaata
ccctataaaattattaggggtgttgcattttgggaactaaaggaaatcacggcaatgctg
aacctaattaagtgcatctattctgataatgaaaaaaatgccatcattgcatcattactt
taccctccaagaggattgggacaagcatcagcagataagatcaaaggcctcatggacagc
aaggccggaataactactgccctagatactttaagagagataaatgagaacaagatactt
tcagatattcctaccaaaggatatacagttattgcagactttgtgcgaatgcttaatgct
tgtaagttattatttgatacgaaacctgttaatgaagcattagatgcaatttttgaaaaa
ttatttgaaatgtcaggattaaaacaagaatatttatactttgatggcaaaaagaaaaag
aatctggatatttccaacttggaagcagattatacaaataagagatatcttaatgttaaa
cttctcaagacatattttgtagggaaattacaagagaataaacctgctgacgaaaatcca
acgtcctcaagtaatgcggatagtatcagggatattgatacatcatacgacgcagagcgg
aactcaatgacggttctggaacgtatacgtgaattcttcaattctctgaccctatacacc
tcagatttgcctgacctaagtgactttacggagaatgaatcccaaaaatttagaagagaa
gaaaatgaaagagatggttatgtcactatttcaacgatccatggggctaaaggtttagaa
tggcctgttgtcttcatacctgggtgcgaagaaggaataataccgtctatcttttctgga
gaaaacgatgctgatcaagatggcgaagatgatcctgaaacagatgaagataatggtagt
gatatcgataagaaaatacagatagaaagcccttcaaaacgacgtgtaaagtcaattgat
gaggcagtccatgaagaaaggagaatgttctttgtagctcaaacacgtgccaaatatttg
ttatacctatcatcggtaacatcagaggggcctcgtccaagtgctccaagtaggtttctt
acccctgacctactagggactatgactgatgagcagaaggtcttcaaaaatttagaaatg
ataatgaaactatatcgtactttgaagaaagagcctccggttgcatctcaaaaggacttc
tcactgaaggttctgttaaaggattattcccaattcgttagtgctagaagagaacatctt
atatggaatggttctccctgtagaaacacctcaaatttggaccttagcaaaaatatagta
acgcctccaaaattatccctggaatttactactgctgctcagcagttacattcgaccaaa
ggagtgacaagaaattcagttaaccaaactaaaagacaaatgcttacgaaaagtccgaag
aagagctatgcgccttctattactccttctactcctagcccgactaaactttatgctcct
accacttcatcgggggatatatcccctaagcctgcaaaagattatgccccaggatataaa
tcatttaggagagcacctaatactttgtctccaaggaagctagaatattcacccagtaaa
tctaaaactactaaaatctctcttgtcaccaattctccggagagactggtgaaacgttcc
aatgaaaattcttttctatcatttactgataaaccaaagtctactatagggacgacccct
tcaaaatactggaatgaacctgcaattaagaaggaatataacgaacttacagtagtgaaa
tcggaatcaacaacaggagatcttcctatggctttaaaatcgaaacaatcaaaaccaccg
aataaaaattgccgtgtaacaaaagtaaaagaagaatttgactccaagaaagaaagttca
tatgatgttaacaatacaactgcagctgagcttttacatgatccaaatgatttgacaata
gatgatcgtcccatccttacaaatgcaaagactttagctgatgctataagaaagcctagt
aggaagaatttgaagaaggaaaatattaacaatggaaagttgaagaaggagggacagcct
aatcaaatggatattttttctcagttgtcaagggcaaaaaagaaaacgaagactaataaa
ggtgaaatcattataatcgattaa
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