Naumovozyma castellii: NCAS_0A10430
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Entry
NCAS_0A10430 CDS
T02233
Symbol
NCAS0A10430
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03013
Nucleocytoplasmic transport
ncs03015
mRNA surveillance pathway
ncs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCAS_0A10430 (NCAS0A10430)
09122 Translation
03013 Nucleocytoplasmic transport
NCAS_0A10430 (NCAS0A10430)
03015 mRNA surveillance pathway
NCAS_0A10430 (NCAS0A10430)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0A10430 (NCAS0A10430)
03041 Spliceosome [BR:
ncs03041
]
NCAS_0A10430 (NCAS0A10430)
03009 Ribosome biogenesis [BR:
ncs03009
]
NCAS_0A10430 (NCAS0A10430)
03012 Translation factors [BR:
ncs03012
]
NCAS_0A10430 (NCAS0A10430)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCAS_0A10430 (NCAS0A10430)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NCAS_0A10430 (NCAS0A10430)
mRNA cycle factors
Stress granule specific factors
NCAS_0A10430 (NCAS0A10430)
Spliceosome [BR:
ncs03041
]
Complex C
Other components
EJC/TREX
NCAS_0A10430 (NCAS0A10430)
Ribosome biogenesis [BR:
ncs03009
]
Eukaryotic type
90S particles
Helicases
NCAS_0A10430 (NCAS0A10430)
Translation factors [BR:
ncs03012
]
Eukaryotic type
Initiation factors
eIF-4
NCAS_0A10430 (NCAS0A10430)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
DUF7784
AAA_30
Cas3-like_C_2
CMS1
Helicase_RecD
CobA_CobO_BtuR
Motif
Other DBs
NCBI-GeneID:
96901080
NCBI-ProteinID:
XP_003673982
UniProt:
G0V803
LinkDB
All DBs
Position
1:2073293..2074492
Genome browser
AA seq
399 aa
AA seq
DB search
MSFNRETDQKLKFKTSKKLKVSPTFESMSLKPDLLRGIYSYGFETPSSIQSRAITRIISG
SDIIAQAQSGTGKTATFAIGMLQIIDLKKKDLQALILSPTRELAVQINQVVSNLGDYMNV
KSLAMTGGKMMKDDLKKVSKSGCQVVSGTPGRVLDMIKRQLLAIRNIQMLVLDEADELLG
ESLGFKQQIYDIFAKLPKSCQVVVVSATMSKDIIEVTKKFMSDPVKILVKQDEISLEGIK
QYYVDVGKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMK
QEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFG
RKGIAINFLTSSDGSTFRDIQKFYRIKIKPMPANLSELT
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaatagagaaactgatcagaagctgaagtttaaaacatccaagaaattgaaa
gtctcaccaacttttgaatccatgtcattaaagcctgatttgcttcgaggaatctactca
tacggatttgaaacaccgtcatcaattcagtctagagccataacaagaattatctcaggg
agtgacataattgctcaggcgcaatctggtacaggtaagactgccacattcgccattggg
atgcttcaaataattgacttgaagaagaaagatttgcaagctttgattttatctcccaca
agagagctagctgtgcaaattaatcaagttgtttccaatttgggagactatatgaatgta
aagtcactagcgatgacaggtgggaaaatgatgaaagatgatttgaaaaaggtttctaaa
agtgggtgtcaagtcgttagtgggacacctggaagagtgttggatatgataaagaggcaa
ttactggcgataaggaacatccaaatgttagtgttggatgaagctgatgaactgttagga
gagtctcttggttttaaacaacaaatctatgatatatttgcaaaactacccaagagttgt
caagtggtagttgtaagtgctactatgagtaaagacattattgaagtcactaagaaattt
atgagcgacccagtcaagattctcgtgaagcaagatgaaatttctttggaaggtattaaa
cagtattatgttgatgtgggtaaagaagaatggaaatttgatactttgtgtgatatatat
gattcattaacaattacacaatgtgttatcttttgtaatacaaagaaaaaagtggattgg
ttgtcagctaaattaacacaatccaattttgctgtagtgtcgatgcatggtgatatgaag
caagaggaaagagataaggttatgaatgatttcagaacgggtcattcgcgtgtattaatt
tccacagatgtttgggcccgtggtattgatgtccaacaagtatcattagttattaattat
gatttgccagaaaatatggagaattatattcatagaattgggagaagtggtagatttggt
agaaaagggattgccattaactttttaacaagtagtgatggtagcacttttagagacatt
caaaaattctaccgtatcaaaattaagcccatgccagccaatctctctgagctcacctag
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