Naumovozyma castellii: NCAS_0A10960
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Entry
NCAS_0A10960 CDS
T02233
Symbol
NCAS0A10960
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
ncs
Naumovozyma castellii
Pathway
ncs03030
DNA replication
ncs03410
Base excision repair
ncs03420
Nucleotide excision repair
ncs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCAS_0A10960 (NCAS0A10960)
03410 Base excision repair
NCAS_0A10960 (NCAS0A10960)
03420 Nucleotide excision repair
NCAS_0A10960 (NCAS0A10960)
03430 Mismatch repair
NCAS_0A10960 (NCAS0A10960)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncs03032
]
NCAS_0A10960 (NCAS0A10960)
03036 Chromosome and associated proteins [BR:
ncs03036
]
NCAS_0A10960 (NCAS0A10960)
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0A10960 (NCAS0A10960)
DNA replication proteins [BR:
ncs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NCAS_0A10960 (NCAS0A10960)
DNA Replication Termination Factors
ELG1-RFC complex
NCAS_0A10960 (NCAS0A10960)
Chromosome and associated proteins [BR:
ncs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
NCAS_0A10960 (NCAS0A10960)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NCAS_0A10960 (NCAS0A10960)
Check point factors
HRAD17(Rad24)-RFC complex
NCAS_0A10960 (NCAS0A10960)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
Orbi_VP2
AAA_assoc_2
DNAX_ATPase_lid
Rep_fac_C
NYD-SP12_N
AAA_33
Motif
Other DBs
NCBI-GeneID:
96901133
NCBI-ProteinID:
XP_003674035
UniProt:
G0V856
LinkDB
All DBs
Position
1:2184705..2185775
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPKTLKTLSHTEPLTALLNSLSQQPKDLPHLLFYGPNGSGKKTRCMTLLESI
FGSGVYRLKIDIREFVTPSNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME
QVDFQESKDGLAHRYKCVVINEANSLTRDAQAALRRTMEKYSRNIRLIMLCDSMSSIISP
IRSRCLMVRVPAPVNNEIVSILGNVVEMEKINLENGSILNQIARECNGNLRTALLMLESM
SLNNEMQLKVGTPIVRPDWLVVILKLSNKIQREKTVGSLIECRAILYDLLAHCIPAKTIL
QELTLALLKNSGISKDKMKLGIIECASVFDERLSLGNKAIFHLEGFIAKVMCILDE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtgggttgacaaatatcgtccaaagacattgaagacattgtctcatacggaa
ccgctaacagcgcttctcaactcattatcacaacagccaaaggacttacctcatctttta
ttctatggacctaatggtagtggtaaaaagactagatgtatgactctcttggagtccatt
tttggttctggtgtttatagattaaagattgatataagagaatttgtaaccccttctaat
cgtaagttggaattgaatgtggttagttcgccctaccatttggaaataacgcccagtgac
atgggaaataacgatagaattgttatccaggaattgttaaaagaggtggcacaaatggaa
caagtggattttcaagaatccaaagatggtttagctcatagatataaatgtgtcgttatc
aatgaagctaattctttgactagagacgcccaggctgctttaagacgtaccatggagaaa
tattccagaaacatcagattgattatgttgtgtgattcaatgtcttctataatttctcct
attaggtcgcgttgtttaatggttcgtgtaccagcccctgttaataatgaaattgtttcc
atattaggcaatgtcgtggaaatggagaagattaacttagaaaatggctcaatattgaac
caaattgcaagagaatgtaatggtaatttaagaacggcattgctgatgctagaatctatg
tcactaaataatgaaatgcaattgaaggtaggaactcctatagtgagaccagactggctt
gtcgttatattaaaattatcaaataaaattcaaagggaaaagacagtcggatccttaatt
gaatgtcgtgctatactttatgatctattagcgcattgcattccagcaaaaaccattctt
caagagctgacacttgcgttattaaaaaactctggtatatctaaagataagatgaaatta
ggaataattgaatgcgccagtgtatttgatgaaagattatcattaggtaataaagctata
ttccatttagaaggattcattgccaaagtaatgtgtatcttggacgaatga
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