Naumovozyma castellii: NCAS_0A11210
Help
Entry
NCAS_0A11210 CDS
T02233
Symbol
NCAS0A11210
Name
(RefSeq) CCR4-NOT core subunit NOT5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ncs
Naumovozyma castellii
Pathway
ncs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCAS_0A11210 (NCAS0A11210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0A11210 (NCAS0A11210)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCAS_0A11210 (NCAS0A11210)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NCAS_0A11210 (NCAS0A11210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
96901158
NCBI-ProteinID:
XP_003674060
UniProt:
G0V881
LinkDB
All DBs
Position
1:2223815..2225563
Genome browser
AA seq
582 aa
AA seq
DB search
MSQRKLQQDIDKLLKKVREGLEDFEVIYEKFQDTEPSNNSYREKLEADLKREIKKLQKHR
EQIKTWLSKDDTKDRQQALMENRRLIENGMERFKSIEKLMKTKQFSKEALTNPDIIKDPR
ELKKRDQVEFIHECLDELQKQLESHEAQNDDEQIERHEFHITNLENILKMLQNNEMDPET
IKDYQDDIKYYVENNEDPDFVEYDTIYEDMGCELNATTTTPVPVSVPQAAATKKSPKKEL
NSAKKELKKLTISSSSPSPSPSPSRQSSIRIPSQTTKLNNLPKSTSDNTKQPATINNNNN
NNNTNNNNNIQQEQDDAKATQQEQTTKKNEDDSQQEQELQFPPDKTKEIEESIKNDIESN
KAFKNPLFKKELKYWLASKKPLMQPYKEMPPKMVSQLESSLLNCPDSLDADSPYLYQVPL
SNPHPTSIFFPSEPIRFTYPYEVIKSNQGNLNPNDKTHASHQSVEDIYSRTSLAKIFSKF
DLDTLFFIFYHYQGTYDQFLAARELSQNRHWLFNKVDSCWYFREIEKLPPTINMSNTIPN
NKREDSNSDEEESWRYFDYKKSWLARRCGPDFVYHEEGFEKL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaaggaaactacagcaggatatcgataaactattgaaaaaagtaagagaggga
ctggaagattttgaagtcatttatgaaaagtttcaagatactgaaccgtcaaataattca
tatagagaaaaattagaagctgatttgaaaagagaaatcaaaaaattacaaaagcataga
gaacaaattaaaacttggttaagtaaagatgatacaaaggatagacaacaagcattaatg
gaaaatagaagacttattgaaaatggtatggaaagatttaaatcaattgaaaaattaatg
aagacaaaacaattctcaaaggaagcattaacaaatcctgatattattaaagatccaaga
gaattgaaaaaaagagatcaagtggaattcattcatgaatgtctggatgaattacaaaag
caattggaatctcatgaggctcaaaatgatgatgaacaaattgaaagacatgaatttcat
attacaaatttggaaaatatattaaaaatgttacaaaataatgaaatggatccagaaacc
attaaagattatcaagatgatattaagtattacgtcgaaaataatgaagatccagatttt
gtagaatatgataccatatacgaagatatgggctgtgaacttaatgcaactacaacaact
cctgtaccagtatctgttccgcaagctgcagcaacaaagaaatcaccaaagaaagaatta
aattcagcaaagaaagaattgaaaaaattaacgatctcgtcatcatctccttctccatca
ccatctccatcacgtcaatcttccattagaataccttcgcaaactacaaaattgaataat
ttaccaaaatcaacatcagataatactaaacaaccagctacaattaataataataataac
aataataatactaataacaataataatatccaacaagagcaagacgacgcaaaggcaact
caacaggaacaaacaacaaagaaaaatgaagatgattcacaacaagaacaagaattgcaa
ttcccaccagataagacaaaggaaattgaagaatccattaagaatgatattgaaagtaat
aaagcctttaaaaatccattatttaaaaaagaattaaaatattggttagcttctaagaaa
ccattaatgcaaccatataaggaaatgccaccaaagatggtttctcaattggaatcatca
ttattaaattgcccggattcattagacgctgattcaccatatttatatcaagtgccttta
tcaaaccctcatccaacatcaattttcttccccagtgaaccaataagatttacttacccc
tatgaagttattaaatcaaatcaaggaaatttaaatccaaatgataaaacccatgctagt
catcaatcagtagaagatatctattcccgaacatctttggccaaaatattctcgaaattc
gatttggatactctgttttttattttttatcactatcaaggaacctatgatcaattctta
gccgctagagaactgtctcaaaatagacattggttgtttaataaagtagattcttgttgg
tattttagagaaattgaaaaattaccaccaacaataaatatgtccaatactatcccaaac
aacaagagagaagatagtaatagtgatgaagaagaatcatggagatatttcgactataag
aaaagttggcttgcaagacgttgcggccctgattttgtttatcatgaagaaggtttcgaa
aaactttga
DBGET
integrated database retrieval system
