Naumovozyma castellii: NCAS_0A11480
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Entry
NCAS_0A11480 CDS
T02233
Symbol
NCAS0A11480
Name
(RefSeq) cleavage polyadenylation factor RNA-binding subunit YTH1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ncs
Naumovozyma castellii
Pathway
ncs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCAS_0A11480 (NCAS0A11480)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0A11480 (NCAS0A11480)
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0A11480 (NCAS0A11480)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NCAS_0A11480 (NCAS0A11480)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NCAS_0A11480 (NCAS0A11480)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
96901185
NCBI-ProteinID:
XP_003674087
UniProt:
G0V8A8
LinkDB
All DBs
Position
1:complement(2272174..2272821)
Genome browser
AA seq
215 aa
AA seq
DB search
MSVVHANNTREYPFKFEPFLRQEYSFGLDPDRPTCPDFDYSVGVSSCPRGNLCPMKHNLG
IFQNKIVCKHWLRGLCKKNDQCEFLHEYNLRKMPECVFFSKNGYCTQGAECPYLHIDPQS
KIPNCEDYDLGFCPLGQECKRKHIKKTLCQRYINGFCPLGPECEQTHVSFDVNVFGVIED
LDHYRIKRDDEINTKKMDEEKERRLNAIINGEIDT
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgttcatgctaacaatacacgagaataccccttcaagtttgagcccttcctc
agacaggaatactcatttggcttagatccagatcgtccaacatgtcccgattttgattac
tcggtgggtgtatcatcttgtccccggggtaatttatgtcccatgaaacacaatttgggg
atattccaaaacaagattgtctgtaagcattggctacgagggctatgtaagaagaacgat
caatgtgagttcttgcacgagtataatttgagaaagatgcctgaatgtgtattcttcagc
aagaacgggtattgtactcaaggtgcagaatgcccctacttacacatcgacccgcagagc
aagatccccaactgtgaggattacgatctggggttctgtccattgggacaggagtgcaag
aggaaacacatcaagaagacgttgtgtcaacggtacatcaacgggttctgcccgctgggg
cccgagtgtgagcagacgcatgtgtcgttcgacgtgaacgtgtttggggtcatagaggac
ctggaccactaccggatcaagagggacgacgagatcaacaccaagaagatggatgaagag
aaggagagaagattgaacgctattatcaatggggagatcgacacgtag
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