Naumovozyma castellii: NCAS_0A11650
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Entry
NCAS_0A11650 CDS
T02233
Symbol
NCAS0A11650
Name
(RefSeq) chromatin-remodeling histone chaperone SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ncs
Naumovozyma castellii
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0A11650 (NCAS0A11650)
03036 Chromosome and associated proteins [BR:
ncs03036
]
NCAS_0A11650 (NCAS0A11650)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NCAS_0A11650 (NCAS0A11650)
Chromosome and associated proteins [BR:
ncs03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
NCAS_0A11650 (NCAS0A11650)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
Spt6_S1
HTH_44
Tex_central_region
SPT6_acidic
SH2
HHH_9
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
96901202
NCBI-ProteinID:
XP_003674104
UniProt:
G0V8C5
LinkDB
All DBs
Position
1:2316596..2320939
Genome browser
AA seq
1447 aa
AA seq
DB search
MEEDKSDNIVARDDEVAQDVEDKPPSDEEEGEDVFDSSEEDADLDEDEDEARKIKEGFIV
DDEDEDDQVEGGVSKRRRKHKRRQREEEDDRLSEDDLDLLMENAGVRRNQETASSGRLKR
LKREGEDETTSEGTQQEVQKTQSATKLDDFFSEDENEEEEHTVDDTRRPDYNNNEEDHEN
RNRKSGMLDELDDFIEEDEFSDEDEETRQQRLEEKKRMRDQRMKQPTQITGLSSDKIDEM
YDIFGDGHDYDWALEIENEELEQGTLDDLDAEEEGEFGEQTGASKAKKKITLQDIYDLQD
LKKNLMTEEDMIIRKTDIPERFQEIREGLVNYGELSLEDQELETNWISDKISLDKNFDAS
YDLTEFKEAVGNSIKFINQDNLEVPFIYAYRRNYIASKDKDGFVLTEDDLWDIVDLDIEF
HSIIYKRDYVKRFYKELNVVDSMVDEYFRNQNAASIAELNSLQDIYDYLEFTYAQEINEV
LLGNTETNGKKHLKNSSYEKFKASELYNAIKDIGVTAEQVGENIISQHQIHIAVDHPSLK
PREVIESILNANSGDLQVFTSNFKLAIDTVQKYFALELSKNTKIREKVRSDFYKYYLADV
VLTSKGKREIQRGSLYEDIKYAINRTPMHFRRDPDVFLRMLEAENLNLLSVKLHMSSQAQ
YIDHMFQIALETTNTSELATEWNNFRKSAFKQALDKIFKDISREIKDDLAKTCQKLVAKT
VRHKFMTKLDQAPFIPNIKDPKIPKLLTLTCGQGRFGADAIMAVYVNRKGDFVKDFKIVD
NPFDKMNPQNFEDTLDNIIQTCQPNAIGINGPNPKTQKFFKRLQEVIHKKQIVDNRGHSI
PIVYIDDEVAIRYQHSDRGAQEFPNKPPLIKYCIALARYMQSPLLEYSNLATEELTSLSI
HPHQSLLPQAMLVKALETAFVDIVNLVGIEVNKATDNPYYASALKYISGFGKRKAIDFLE
SLQRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPE
DYHLATKVAADALEYDPDAIAEKEDQGTMSEFIEYLREDPDRRTKLESLNLESYAEELEK
KTGQRKLNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGETEKTFFKGCIIPVRVER
FWHNDIICTTNSEVECVVNAQRHLGAQLKRPAEELYEVGRTYPAKVIFIDYANITAEVSL
LEHDVKHQYVPITYSKDPSIWDLKQELEDSEEEKKITMAEARAKRTHRVINHPYYFPFNG
KQAEDYLRSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHIDIQELEKENPLALGRVLVV
EGQRYHDLDQIIVEYLQNKVRLLNELTSNEKFKVGNQRDVVKFIEDYSKVNPNRSVYYFS
LNYKNPGWFYLMFKLNAKSKLYTWNVKLTNTGFFLVNYNYPSVIQLCNGFKTLLRSSSTK
SKTTAYH
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggataaaagtgataacatcgttgctagagatgatgaggttgctcaagatgtt
gaagacaaaccacctagtgatgaagaagaaggtgaagatgtctttgattcctcagaagaa
gatgctgacttagatgaagatgaggatgaagcaaggaaaatcaaagaaggatttattgta
gatgatgaagacgaagacgaccaggtcgagggcggagtttctaaaagaagaagaaagcat
aaaagaagacaaagagaagaagaagatgatagattatctgaagatgatctggatctactt
atggagaatgcaggtgttagacgtaaccaagaaactgcatcatcaggaagattaaagaga
ttaaaaagagaaggagaagatgaaacaacttccgaaggtacccaacaagaggttcagaaa
acacaaagtgcaaccaaattagatgactttttctctgaagatgagaatgaagaagaagaa
cacacagtcgatgatacaaggagaccagattataacaataatgaagaggaccatgaaaac
agaaatcgtaaaagtggtatgttggacgagttagatgatttcattgaagaggacgaattt
tcagatgaagatgaagagaccagacaacagagactggaagaaaagaaaaggatgagagac
caacgaatgaaacaacctactcaaatcacaggtctttcctctgataaaattgatgaaatg
tatgatatctttggtgatggccatgactacgactgggcattagaaattgaaaatgaggaa
ctagagcaaggtacgttagatgacctagatgctgaagaagaaggcgaatttggtgaacaa
actggtgcctcaaaagccaagaagaagattactctacaagatatctacgatttgcaggac
ttgaaaaagaatttaatgacagaagaggacatgatcataaggaaaactgatattcctgaa
agatttcaggagatcagggaaggtttggttaattatggtgaattatctttggaagatcaa
gaattagagaccaactggattagtgataagatatcattggataaaaactttgatgcatca
tatgatctaaccgagtttaaagaagccgttggaaattctatcaaatttattaatcaagat
aatctggaagtccccttcatttatgcttatcgccgtaattacatagcgtcaaaggataag
gatgggtttgtcttaactgaagatgatttatgggatattgtagatcttgatattgaattt
cacagtattatctacaagagagattatgtcaaaagattttacaaggaattgaatgtcgtc
gactcaatggtggatgagtattttagaaaccaaaatgcagcctcaattgccgaattgaac
tcattacaagacatttatgattatttggagtttacttatgctcaagaaattaatgaagtt
ttgttgggcaacactgaaacaaacgggaagaaacatcttaaaaattcaagctacgagaag
tttaaggcaagtgaactgtataatgccattaaggatattggtgtaactgcggagcaggtt
ggagaaaatataatatctcaacatcaaattcatatcgctgttgaccacccaagtttaaaa
ccaagagaggtcatcgaatcgatcttaaatgcgaactccggtgatttgcaagtcttcacc
tccaatttcaaattggccatagatacagttcagaaatattttgcacttgaactttcaaag
aacaccaagattagggagaaggtgagatctgatttttataaatattacttggcagatgtt
gtccttacttcaaagggtaagagagaaatccaaagaggttcattatatgaagatatcaag
tatgccattaatagaacgccaatgcacttccgcagagatccagatgtatttttacgaatg
ctagaagcagagaatttgaacttattaagtgtcaagctacatatgtcttcacaggcacaa
tatattgaccatatgtttcagattgcattagaaacgacgaatacctctgagttagcaaca
gaatggaataatttccgtaaatcagcctttaaacaagcattggataaaatcttcaaagat
atatctagagaaattaaggatgacttagcaaagacgtgccagaaattagtggcgaagaca
gttcgtcacaaatttatgacaaaattagatcaggccccattcattccaaacatcaaggat
ccaaaaatccccaaattactgactttgacttgtggacaagggaggttcggagctgacgca
ataatggctgtgtacgtcaatcgtaaaggtgattttgtgaaagatttcaaaatagtggat
aatccctttgacaaaatgaatcctcagaattttgaagatacattagataatattatccaa
acttgtcaacctaatgcaattggtatcaatggtccaaatccgaaaacacagaagttcttc
aaacgactacaagaagttatccacaaaaaacaaattgttgataatagaggtcatagtatt
ccaattgtctatattgacgatgaagttgctattcgttaccaacattctgaccgtggtgct
caagaattccctaataagccacctctcattaaatattgtattgcacttgcacgttatatg
caatcacccttattagaatattcaaatttggccactgaggaactaacgtctttatcaata
catccacatcaatccttgctaccccaagcaatgttggttaaagcattagagactgccttt
gtcgatattgtgaatttagttggtattgaagttaataaggcaacagataacccatattat
gctagtgctttgaaatatatctctggttttggtaagcgtaaagcaattgatttcctagag
tcattacaaagactcaatgagccactattagcacgtcagcaattgattactcacaatatt
ttacataagacgatctttatgaattccgcagggttcttatacatatcatggaatgagaaa
aggcaaaagtatgaagatttggagcatgatcaactagacagtacaagaatacatcctgag
gattaccatttggctaccaaggttgccgcagacgctttagaatatgatccggacgctatt
gcagaaaaggaagaccagggtactatgagtgaattcattgaatatttaagagaagaccct
gatcgcagaactaaactagaatcattgaatttagaatcatatgcagaggaacttgaaaag
aagactgggcaaagaaaactaaataatttgaatacaattgttttggaattattggatggt
tttgaagagctaaggaacgatttccacccattacaaggggatgaaattttccaaagttta
actggtgaaaccgagaaaacatttttcaaagggtgtattattcctgtcagagttgaaaga
ttttggcacaatgatattatttgtactacaaactcggaagttgaatgtgtagttaatgct
cagcgtcatttaggtgcacaactaaaaagacctgccgaagaactttatgaagtaggcagg
acatatcctgcaaaggttatttttattgactatgctaatattactgcagaagtgtccctt
ctagagcatgatgtcaaacatcaatatgtcccaataacttacagtaaagacccatctatt
tgggatcttaaacaagaactggaggattcagaagaagaaaagaaaattacgatggccgaa
gctagagctaagagaactcatcgtgttatcaatcatccatactatttcccattcaatggt
aaacaagctgaagattatttaagaagtaaagaacgtggtgattttgtaattagacaatct
agccgaggagacgaccatttggctattacttggaaactagacaaagatttattccaacat
atagacattcaagaattagagaaagaaaacccattagccttggggagagtgctagttgtt
gaaggtcaaagataccatgacttggatcaaattatcgtggaatatttacaaaataaggtt
cgtcttcttaacgaactgacgtcaaatgaaaagttcaaggtaggaaaccaaagagatgtt
gttaaattcattgaagattattcgaaggtgaatccaaatagatctgtttattatttcagt
ttgaactataagaacccaggttggttctatctgatgttcaaattaaacgcgaaaagtaaa
ctttacacttggaatgtgaagttaaccaatactggattttttttagtgaattacaactac
ccaagtgttattcaactctgtaatgggttcaagacattgttaagatcaagcagcactaaa
agtaagacaacggcatatcattaa
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integrated database retrieval system
