Naumovozyma castellii: NCAS_0A13720
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Entry
NCAS_0A13720 CDS
T02233
Symbol
NCAS0A13720
Name
(RefSeq) TRAMP complex RNA-binding subunit
KO
K12597
protein AIR1/2
Organism
ncs
Naumovozyma castellii
Pathway
ncs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCAS_0A13720 (NCAS0A13720)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0A13720 (NCAS0A13720)
03016 Transfer RNA biogenesis [BR:
ncs03016
]
NCAS_0A13720 (NCAS0A13720)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
NCAS_0A13720 (NCAS0A13720)
Transfer RNA biogenesis [BR:
ncs03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
NCAS_0A13720 (NCAS0A13720)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_2
zf-C2H2_10
DUF7815
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
96901408
NCBI-ProteinID:
XP_003674310
UniProt:
G0V8Y1
LinkDB
All DBs
Position
1:2696802..2697863
Genome browser
AA seq
353 aa
AA seq
DB search
MSSLLSEVETADILPIVKDTSPSVPDGTITKLPAPSIEEVDEDPEALRALRGQGRYFGVP
DDDVNGIKELEPKCNNCSQRGHLKRDCPHVICTYCGSMDDHYSQHCPKAIKCANCNENGH
YRSQCPQKWKRVYCTLCNSKRHARDRCPSIWRVYLLKDTDEKKSSLKLPFENIFCYNCGV
SGHFGDDCDQRRSSRVPNDDGSAFSGDNLDSKLKNQYYDRLEEYIKENEQKYYDNYADDF
NYDDYEYDDASYDDRYNNNNNNNYNNNSKKRRRAESPFSSQSYSDKRSQRPNRNSQGNQR
NRNVSHPLDYPRSTQQNMNSSRYGSGQRDNSRQTANYKSYNSFKPFRSGTLRR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctttactatcggaagtagaaaccgcagatatactgcccatcgtgaaagatacg
agtccatctgttccggatggtaccataactaagctccctgccccatccatagaggaagtt
gatgaagacccagaagctttaagggcacttagaggacaaggccgttattttggtgttcct
gatgacgatgtaaacggtattaaagagctagaacctaagtgtaataattgttctcagaga
ggacacttaaagagagactgtccccacgtcatatgtacatattgtggatctatggacgat
cattattctcaacattgtccaaaggctatcaaatgtgccaattgtaacgaaaatgggcat
tatagatcgcaatgtccgcagaagtggaaaagagtttattgcacactttgtaatagtaaa
aggcatgcaagagataggtgtcccagtatatggagagtttatttattgaaagatacagat
gaaaagaagagctctctaaaattaccatttgaaaacattttttgctataattgtggtgtt
tctggtcacttcggagatgattgtgaccaaagaagatcatctcgagtgccgaacgacgat
ggaagtgcattttctggcgataatctagattcaaagttaaaaaatcaatattacgataga
ttagaagagtatatcaaggaaaatgaacaaaagtactatgataattatgctgatgatttt
aactatgacgattatgaatatgatgatgcttcctatgatgataggtataacaataataat
aataataattataataacaattcgaaaaaacgccggagagcagaatctccattttcctcc
caatcatatagtgataagagaagtcaacgaccaaatagaaattctcaaggtaaccaaaga
aatagaaatgtatcccatccattggactacccaagatcaactcaacagaacatgaatagt
tctagatatggaagtggacaacgagataacagcaggcaaaccgcaaactacaagtcgtac
aattcgttcaaaccattcagaagtgggacccttagaagatag
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