Naumovozyma castellii: NCAS_0A13760
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Entry
NCAS_0A13760 CDS
T02233
Symbol
NCAS0A13760
Name
(RefSeq) AAA family ATPase CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ncs
Naumovozyma castellii
Pathway
ncs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NCAS_0A13760 (NCAS0A13760)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0A13760 (NCAS0A13760)
03009 Ribosome biogenesis [BR:
ncs03009
]
NCAS_0A13760 (NCAS0A13760)
04131 Membrane trafficking [BR:
ncs04131
]
NCAS_0A13760 (NCAS0A13760)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncs04147
]
NCAS_0A13760 (NCAS0A13760)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NCAS_0A13760 (NCAS0A13760)
Ribosome biogenesis [BR:
ncs03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NCAS_0A13760 (NCAS0A13760)
Membrane trafficking [BR:
ncs04131
]
SNARE
SNARE associated proteins
Others
NCAS_0A13760 (NCAS0A13760)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NCAS_0A13760 (NCAS0A13760)
Exosome [BR:
ncs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NCAS_0A13760 (NCAS0A13760)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_33
TIP49
AAA_22
CDC48_2
AAA_14
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_17
ATPase
Parvo_NS1
AAA_7
IstB_IS21
AAA_24
Vps4_C
AAA_25
NPHP3_N
AAA_18
DUF815
Sigma54_activat
ResIII
ABC_tran
PhoH
SLFN-g3_helicase
KAP_NTPase
DUF5839
Motif
Other DBs
NCBI-GeneID:
96901412
NCBI-ProteinID:
XP_003674314
UniProt:
G0V8Y5
LinkDB
All DBs
Position
1:2701600..2704077
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AA seq
825 aa
AA seq
DB search
MKKEEHKPLLDASGADHLDDDPTATAILRKKKKANNLLVDDATNDDNSVIAINSNTMDTL
ELFRGDTVLVKGKKRKDTVLIVLIDDELEDGACRLNRVVRNNLRIRLGDLISVHPCPDIK
YATRISVLPIADSIEGLTGNLFDVFLKPYFVEAYRPVRKGDHFIVRGGMRQVEFKVVDVE
PEEYAVVAQDTVIHWEGEPINREDEENNINEVGYDDIGGCRKQMAQIREMVELPLRHPQL
FKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKA
FEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKSRSNVVVIAATNR
PNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEYIASETHGYVGA
DIASLCSEAAMQQIREKMDLIDLDEEEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVV
ESVNVTWDDIGGLDEIKQELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAK
AVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARASAPTVVFLDELDSIAKARGNS
AGDNGSDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDEP
ARLSILKAQLRKTPLEPGLDLNAIAKAAQGFSGADLSYIVQRAAKFAIKESIELQKLLEE
SKEVKAEEDIEMGDSGAEPKQESEEPEEDPVPFITKEHFAEAMKTAKRSVSDAELRRYEA
YSQQMKASRGQFSSFDFENADASGNGGNGASFGADGAGDDDDLYN
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaagaacacaaaccgttattagacgcatctggtgcagatcacttagatgac
gatcctacagctaccgccatcttaagaaaaaagaagaaggctaataacttgttggtcgac
gatgctaccaatgatgataactctgtcattgccatcaactctaataccatggatacttta
gaattattccggggggacactgttttggttaagggtaagaagagaaaagacaccgtcttg
atcgttttaattgatgacgagctagaagacggtgcatgtagattgaaccgtgttgttcgt
aataatctacgtatcagattaggtgacctgatcagtgtgcacccatgtccagatattaaa
tacgctactagaatatctgtcttaccaatcgcagattccattgaagggctaacaggtaat
ctatttgacgtcttcttgaagccttactttgttgaagcatatagacctgttagaaagggg
gatcatttcatagtaagaggtggtatgagacaagtagaatttaaggttgttgatgtggaa
cctgaagaatacgctgtcgttgcacaagataccgttattcattgggaaggtgaaccaatt
aacagagaggatgaagaaaataacattaacgaagttggttacgatgacattggtggttgt
cgtaaacaaatggctcaaattagagaaatggttgaattacctttgagacatcctcaatta
tttaaagccattggtattaaaccaccaagaggtgtcctaatgtatggtccacctggtact
ggtaagacattgatggctagagctgttgcgaacgaaacaggtgccttcttcttcttaata
aatggtccagaggttatgtccaagatggccggtgaatctgaatctaacttaagaaaggcc
ttcgaagaagctgaaaagaatgcaccagctattatttttatagatgaaattgactctatt
gcaccaaagagagataagacaaatggtgaagtggaaagaagagttgtttcccaattattg
actttaatggatggtatgaaatctaggtcaaatgttgtcgtcattgcagctactaataga
ccaaactccattgatcctgcattgaggagatttggtagattcgatcgtgaagttgatatt
ggtatccccgatgccacaggaagattagaagtgctacgtatccataccaaaaacatgaaa
ttagctgatgatgttgacttggaatatattgcatcagaaactcatggttatgttggtgct
gatattgcatctttatgttctgaagctgccatgcaacaaattcgtgaaaagatggattta
atagatttagatgaagaagaaattgatgctgaagttctagattcattaggagtcacgatg
gataacttcagatttgccttaggtaactctaacccatctgccctacgtgaaactgttgtg
gaaagtgttaatgttacttgggatgatattggtggtttagatgaaattaaacaagaatta
aaagaaaccgtcgaatatcctgttttacatccagatcaatatacgaagtttggcctatct
ccatcaaagggtgttcttttctatggtccaccaggtacaggtaagactttattagcaaag
gctgtggccacggaggtttctgctaacttcatatctgtcaagggtcctgaattgttaagt
atgtggtacggtgaatcagaatccaacattcgtgatatctttgacaaggcaagagcatct
gcaccaactgttgtgttcttggatgaattggattccattgccaaggcaagaggtaattct
gctggtgacaatggaagtgatagagtggtgaatcaattattgacagaaatggatggtatg
aatgccaagaagaatgttttcgtcattggtgccaccaatagacccgatcaaattgatcca
gctattctaagaccaggtagattagatcaattgatttatgttccactaccagatgaacca
gctagattatccattttgaaagcacaattgagaaagactccattagaaccaggtcttgat
cttaacgctattgctaaagctgcacaaggtttctctggtgcagatttatcatatattgtt
caaagagctgctaaattcgccattaaagaatctattgaattacaaaaactccttgaagaa
tctaaggaagttaaggcagaagaagatattgaaatgggtgattctggtgctgaaccaaaa
caagaatccgaagaaccagaagaagatccagttccattcattactaaagaacattttgct
gaagctatgaagactgctaagcgttctgtttccgatgcagaattacgtcgttatgaagct
tactcacaacaaatgaaggcttccagaggccaattcagtagttttgatttcgaaaatgct
gacgcaagtggtaacggtggtaatggtgcttcattcggtgctgatggtgctggtgatgac
gatgatttgtacaactaa
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