Naumovozyma castellii: NCAS_0B01320
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Entry
NCAS_0B01320 CDS
T02233
Symbol
NCAS0B01320
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ncs
Naumovozyma castellii
Pathway
ncs03030
DNA replication
ncs03410
Base excision repair
ncs03420
Nucleotide excision repair
ncs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCAS_0B01320 (NCAS0B01320)
03410 Base excision repair
NCAS_0B01320 (NCAS0B01320)
03420 Nucleotide excision repair
NCAS_0B01320 (NCAS0B01320)
03430 Mismatch repair
NCAS_0B01320 (NCAS0B01320)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncs03032
]
NCAS_0B01320 (NCAS0B01320)
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0B01320 (NCAS0B01320)
DNA replication proteins [BR:
ncs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NCAS_0B01320 (NCAS0B01320)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NCAS_0B01320 (NCAS0B01320)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
RuvB_N
AAA_22
AAA_17
AAA_16
AAA_33
RNA_helicase
AAA_assoc_2
RCF1-5-like_lid
AAA_24
SpoIIIAH
AAA_14
AAA_18
AAA_28
nSTAND3
AAA_5
NACHT
Motif
Other DBs
NCBI-GeneID:
96901778
NCBI-ProteinID:
XP_003674592
UniProt:
G0VB92
LinkDB
All DBs
Position
2:217380..219995
Genome browser
AA seq
871 aa
AA seq
DB search
MVNISDFFNKNKKKLPTAKSSATNSRTSSSASKAPEIINLDDSDEDDDLEELIQKPPRKR
QLTEAINEKSKAIENSKEEKPVPVVAKAKPVKSPRKAAAPKPKPKSKATGESITAQDVLD
KIPSLDLSKVHVKENITFDFKAGGASTAGDDSLVDVPTDFPEGQPNCLLGLTIVFTGVLP
TLERGESEALAKRYGARVTKSISSKTSVVVLGDEAGPKKLEKIKQLKVKAIDEEGFKQLI
AGMPAEGGDGAAAEKARLKKEQEEAQAMEDAQKIIAQEDAKKERIKLAKSSGAVVSKEDI
IRDEDKLWTVKYAPTNLQQICGNKSSVAKLKSWLSNWEINKKNKFKNAGRDGTGVFRTAM
LYGPPGIGKTTAAHLVAKELGYDILEQNASDVRSKSLLNAGVKNALDNMSVVGFFKHKDD
LADENGKRFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPMILICNERNLPKMRPFDRVC
LDLQFRRPDANSVKSRLMTIAIREGFKLDPNVIDKLIQTTRGDIRQIINLLSTISKTTKS
IGHDNIKAISSAWEKNIALKPFDIAHKLLDGYIYTDVGSHSFTLNDKIALYFDDFDFAPL
MIQENYLNCKPANLPRGKTHIQAVAEAAESISQGDLVERKIRSSEQLWSLLPLHAVLSSV
RPASKVAGHMTGRINFSSWLGQNSKMNKYYRLLQELQYHTRLSTSTNKIGLRLEYMPLLK
KELLNPLLENGSEGIPQVIQLMDEYYLTKEDWDTIMEFMIGPDVTVQQLKKIPTQTKTAF
TRKYNSMTHPVAIYKAGTSTGTGGGARSTPDFEDVVDADNVATPADDDDEEGKESLDLKK
DKLIKQKARPSKKRAAISKASAASKKRKTKA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatatatcagatttcttcaacaagaataagaagaaattaccaacagcaaagtcc
tcggcgactaattcgcgtacctcctcatcagcttccaaggcacctgaaataatcaatttg
gatgattctgacgaggatgatgatttagaagaactaattcaaaaaccaccaagaaagagg
caattaacagaagccatcaatgagaaatctaaagcaatcgagaactcaaaggaggagaaa
ccagtcccagttgttgccaaagcaaaacctgtgaagagccccaggaaggcggctgcacct
aaacctaaacccaaatcgaaagcaacaggtgaatctataactgcacaggatgtccttgat
aagattccatctttggatctgtccaaagtgcatgtaaaggagaatatcacatttgatttc
aaagcaggaggcgcgtcaacagcaggtgatgattctttggtggatgtgcccactgatttc
cctgaggggcaacccaattgtttattgggccttaccattgttttcactggtgtcttacct
accttagagcgtggtgaatcggaagctttagcaaagagatatggtgctcgtgtcacgaaa
tcaatctcatcgaaaacatctgtagtagtccttggtgatgaagctggtcccaaaaaattg
gaaaagattaagcagttgaaggtcaaggcaattgatgaggaaggatttaaacaattaatt
gccggtatgcctgcagaaggtggtgatggtgctgctgctgaaaaggctagactaaagaaa
gaacaggaagaagcacaagccatggaagatgctcaaaaaataattgcacaggaagatgct
aagaaggaaaggatcaaacttgcaaagagtagtggagcagtcgttagcaaagaagatatc
attagagatgaagataaattatggaccgtgaagtatgcacccacgaatttacaacaaata
tgtggtaataagagtagtgtggctaagttaaaaagttggttatcgaattgggaaataaat
aaaaagaataaatttaagaacgctgggagagacggaactggtgtgttccgtacagcaatg
ttgtatgggccacctggtattggtaaaacaacggcagcccatctcgttgctaaggaatta
ggatatgacatcttggaacaaaatgcttctgatgttagatccaaatcattgctaaatgca
ggtgtgaaaaatgcacttgataatatgtctgttgttgggttttttaaacataaggacgat
ttagccgatgagaatggtaaaagatttgtgattattatggatgaagtcgatggtatgagt
ggaggtgacaggggtggtgtcggtcaattggcacaattttgtcgtaaaacttctactcca
atgatattaatttgtaacgaacgtaatcttcccaagatgagaccctttgatagggtctgt
ttggacttacaatttagaaggccagatgccaatagtgtcaaatcccgactaatgactata
gccattcgcgaaggttttaaattggatcctaacgttattgataaattaattcaaactaca
agaggtgacataagacaaatcattaacttattatcaaccatttccaagacgacaaaatct
attggacatgataatattaaagccatttcttcagcttgggaaaaaaatattgcattgaaa
ccatttgatattgctcataaactattagatggatatatttacactgatgttgggtcccat
agtttcacattaaatgataagattgcattatattttgatgattttgattttgcaccattg
atgatccaggagaattatttaaattgtaaacctgcaaatctcccccgtggtaagacacat
atacaggctgtcgctgaagcagcagaaagtatatctcaaggtgaccttgtggaaaggaag
attcgtagtagtgaacaattatggagtttattaccattacatgctgtgttgtcgtcggtc
cgtccagcttccaaagtggcaggtcatatgacgggtagaatcaatttcagtagttggtta
ggtcaaaattccaagatgaataaatattatagattattgcaagaattgcaataccataca
aggttaagcacatctacgaataagatcggattaagactagagtatatgcctttgttgaag
aaagaattattgaatcccctgttggagaatgggtccgaaggaattcctcaggtgattcaa
ttaatggatgaatattatttaaccaaggaggattgggataccataatggaatttatgatt
ggacctgatgtaactgtacaacagttgaaaaagattcctacccaaactaagactgccttc
acgaggaaatataattctatgactcatcccgtggcaatctataaagctggtaccagtaca
ggtactggtggtggagctcgtagtactcctgattttgaagatgttgttgatgctgataat
gtagctactcctgctgatgatgatgatgaagagggtaaagagagtcttgatttaaagaag
gataaacttatcaagcaaaaggctagaccttcaaagaaaagagctgctattagtaaagcg
tcagcggcttcaaaaaagagaaaaacgaaagcataa
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