KEGG   Naumovozyma castellii: NCAS_0B01380
Entry
NCAS_0B01380      CDS       T02233                                 
Symbol
NCAS0B01380
Name
(RefSeq) DNA-directed RNA polymerase core subunit RPB8
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
ncs  Naumovozyma castellii
Pathway
ncs03020  RNA polymerase
ncs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ncs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NCAS_0B01380 (NCAS0B01380)
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCAS_0B01380 (NCAS0B01380)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncs03021]
    NCAS_0B01380 (NCAS0B01380)
   03400 DNA repair and recombination proteins [BR:ncs03400]
    NCAS_0B01380 (NCAS0B01380)
Transcription machinery [BR:ncs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NCAS_0B01380 (NCAS0B01380)
  RNA polymerase III system
   RNA polymerase III
     NCAS_0B01380 (NCAS0B01380)
  RNA polymerase I system
   RNA polymerase I
     NCAS_0B01380 (NCAS0B01380)
DNA repair and recombination proteins [BR:ncs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NCAS_0B01380 (NCAS0B01380)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG IL2RB_N1
Other DBs
NCBI-GeneID: 96901784
NCBI-ProteinID: XP_003674598
UniProt: G0VB98
LinkDB
Position
2:complement(225534..225977)
AA seq 147 aa
MSNTLFDDIFTVSEVDPGRYNKVCRIEATSTTQEQCKLTLDINTELFPVSNNDQLTITIA
SSLSIESDSNANQDAAQRSWRPPQPDERSIADDYDYVMYGTAYKFEEVNKDIIAVYYSFG
GLLMRLEGNYRNLNTLKQENAYLLIRR
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtccaacactctatttgacgatatattcacggtatctgaagttgacccaggtcgttac
aacaaagtctgtcgtatcgaagccacttccaccactcaagaacaatgtaaattaacatta
gatataaataccgaattattccccgtgtccaataacgatcaattaaccatcacgattgca
tcctcgttaagcatcgagagtgattctaatgctaatcaggacgccgcacaaagaagttgg
agacctccacaaccggatgaaagatccattgctgatgattacgattatgtcatgtatggg
actgcttataaattcgaagaagttaataaggatattatcgctgtgtattattcattcggt
gggcttttgatgagattggaaggtaattatagaaatttaaatacattaaagcaagaaaat
gcttatctattaatccgtcgttga

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