Naumovozyma castellii: NCAS_0B01730
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Entry
NCAS_0B01730 CDS
T02233
Symbol
NCAS0B01730
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ncs
Naumovozyma castellii
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0B01730 (NCAS0B01730)
03041 Spliceosome [BR:
ncs03041
]
NCAS_0B01730 (NCAS0B01730)
03036 Chromosome and associated proteins [BR:
ncs03036
]
NCAS_0B01730 (NCAS0B01730)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCAS_0B01730 (NCAS0B01730)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
NCAS_0B01730 (NCAS0B01730)
mRNA cycle factors
Common to processing body (P body) and stress granule
NCAS_0B01730 (NCAS0B01730)
Spliceosome [BR:
ncs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NCAS_0B01730 (NCAS0B01730)
Chromosome and associated proteins [BR:
ncs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
NCAS_0B01730 (NCAS0B01730)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
96901817
NCBI-ProteinID:
XP_003674631
UniProt:
G0VBD1
LinkDB
All DBs
Position
2:complement(286249..288105)
Genome browser
AA seq
618 aa
AA seq
DB search
MADNLSEQVQNMNINDNESGYVPPHLRGGSRSRGGSRPSSRNSNYEGNNNEGSFFGFNNR
RGGGSFRGGRGGRGGFDNNYGPRGASNRGRWEDGKHIPGPRNPKVELELYGAAEDPQFQS
SGINFDNYDDIPVEASGDNVPEAITAFTSPPLDELLLENIKLARFTKPTPVQKYSVPIVA
AGRDLMACAQTGSGKTGGFLFPVLSESFKTGPTVVDNAQSHGYYQKKAYPTAVIMAPTRE
LATQIFDEAKKFCYRSWVQPCVVYGGSPIGNQMREMDRGCDLLVATPGRLSDLIDRGKIS
LSNVKYLVLDEADRMLDMGFEPQIRAIVEGADMTPVGERQTLMFSATFPADIQHLARDFL
ADYIFLSVGRVGSTSENITQRVLYVENQDKKSALLDLLSASNDGLTLIFVETKRMADQLT
DFLIMQDFRATAIHGDRTQQERERALAAFRSGRANLLVATAVAARGLDIPNVTHVINYDL
PGDIDDYVHRIGRTGRAGNTGVATAFFNRDNSNIVKGLYEILSEANQDVPAFLNDAMRDA
SSGRGGSRGRGGRGNSTRDYRKQGGGNGSWGSRNTSNRSSSGGWGSKPSSSSGGWGSNSG
SSAGGWGESSNSGNSGWW
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaacttatcagaacaagttcaaaacatgaacataaatgacaacgaaagcggg
tacgtcccacctcatttgagaggcggttccagatccagaggtggttccagaccaagttcc
agaaacagtaactacgagggcaacaacaacgagggaagcttttttggtttcaataacaga
cgtggtggcggtagtttccgtggtggaagaggtggaagaggcggcttcgacaacaactac
ggcccaagaggagctagtaaccgtggtagatgggaagatggtaagcatattcctggccca
agaaatccaaaggttgaattagaattgtacggtgccgctgaggatcctcaattccaatct
tctggtattaatttcgataactacgatgacattccagttgaagcttccggtgataacgtt
ccagaagccattaccgcatttacttctcctccattggatgagttattattggaaaacatt
aagttagctcgtttcactaaaccaactccagttcaaaagtattctgttcctattgtggct
gccggtagagatttaatggcttgtgctcaaaccggttccggtaagactggtggtttctta
ttcccagttttgtctgaatcattcaagacaggtccaactgtagtagacaacgctcaatcc
cacggctattaccaaaagaaggcttacccaactgctgttattatggcaccaaccagagaa
ttggccacacaaattttcgatgaagctaagaagttttgttacagatcttgggttcaacca
tgtgttgtttacggtggttccccaattggtaaccaaatgagagaaatggaccgtggttgt
gatcttttggtcgccactccaggtcgtttgagtgatttaattgatcgtggtaagatctct
ttatctaacgtcaagtacttggttcttgatgaagctgatagaatgttagatatgggtttc
gaacctcaaatcagagcaattgtcgaaggtgctgatatgactccagttggcgaaagacaa
acccttatgttctctgctactttcccagctgatattcaacatttagctcgtgatttcttg
gcagattatatcttcttgtctgttggtagagtcggttccacttctgaaaatattacgcaa
agagttctttacgttgaaaaccaagataagaagtctgccttattagatttattatctgct
tctaatgatggtttgactttgatcttcgtggaaactaagagaatggccgaccaattgact
gatttcttaatcatgcaagattttagagctaccgccattcatggtgatcgtacccaacaa
gaacgtgaacgtgccttggctgctttcagatctggtagagctaacttattagttgctact
gccgtcgctgctagaggtttggatattccaaatgtgacccacgttatcaattacgattta
ccaggtgatattgatgattatgttcatagaatcggtagaactggtcgtgctggtaacact
ggtgtggctaccgcattctttaacagagataactctaacatcgttaaggggttatacgaa
atcttatcagaagctaaccaagatgttccagctttcctaaatgatgctatgagagacgct
tcttctggtagaggtggtagcagaggtagaggtggtagaggaaacagcacaagagattac
cgtaagcaaggtggtggcaacggttcttggggtagcagaaacacctctaacagatcttca
tccggtggttggggtagtaagccatcttcatcttctggtggatggggtagtaacagcggt
tcgagcgctggtggatggggtgaaagcagtaacagtggtaacagtggttggtggtag
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