Naumovozyma castellii: NCAS_0B03020
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Entry
NCAS_0B03020 CDS
T02233
Symbol
NCAS0B03020
Name
(RefSeq) RNA-processing protein REF2
KO
K15543
RNA end formation protein 2
Organism
ncs
Naumovozyma castellii
Pathway
ncs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCAS_0B03020 (NCAS0B03020)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0B03020 (NCAS0B03020)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NCAS_0B03020 (NCAS0B03020)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF6643
Motif
Other DBs
NCBI-GeneID:
96901946
NCBI-ProteinID:
XP_003674760
UniProt:
G0VBR0
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Position
2:complement(519918..521741)
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AA seq
607 aa
AA seq
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MSAPIPQLVNISHALQSTTIQQIRADVVDFNSTPFLSQEQFNKIDNYLTSLNLALTQFTN
DNQHIQRKEMGVTEADIQLFNGLKSMYSDYLLQLSNLKNLKIQQLQQHFQQQQQQQQQQQ
QQISPPAPEPVQKPIDIFEDPPTFINKEFNNLKPIQRKNYINAILQDEKLIAKFSKNPIL
LETIANLCILDSEFSDNILAYITFLKKIGYSDLEIKGNMNRSSSSSGSNSSKEKLTKRSR
ASSKLKKPSTSSTTAKTTTTTAATTATKTATSSKLLKPRTTTTTVKKKKDKLISSSPEKV
KKPHIHIATPKMSENSNSTKTESEQKKDATPDDRANNINTNDALSSSQPKLDSKKKISFS
KYLKSDIAVEETSKKRPLPDDEPSDSSSSSFSSSNSTSIQLKKPRSTSDVKVGKSILKKR
TTMPTAGKTPTNSIKFISDPKLITVYGDDLPNHGLIVSPIELKKILKPFKEGEPNEVLHL
ENFTSKPIPLQPSLDLTSSPDLYSDIVDIKGGPINCDTNTPMHYRTSFTNFSSSLKQQQP
RDPIIVDEEDIIEKSKNTMGRKLYRNPIIARAFGENKLLLRKDRGGLPYNNKPPIVVRNN
YPIKSSR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacccatcccacaactagtaaacatttcacacgccttgcaatcaaccacaata
cagcagatccgtgcggacgttgtagatttcaactccaccccattcctatctcaagaacaa
ttcaataagattgataactatttaacttctttaaatttagctttgactcaattcacaaat
gataatcaacatattcagagaaaagagatgggtgttactgaagcagatattcaattattt
aatgggctaaaatcaatgtactcagattatctgttgcaattatccaatttgaagaatttg
aagatacagcaattgcaacaacactttcaacaacagcagcagcaacaacagcaacaacaa
caacaaatttctcctccagcgcccgaaccggtgcaaaaaccaatagatatattcgaagat
ccaccaactttcataaataaagaatttaacaatttgaaaccaattcaaaggaaaaattat
atcaatgcaatcttacaagatgaaaaattaatagctaaatttagcaagaatcctatactg
ttggaaacaattgccaatttatgtatattggattcggaatttagtgacaatatcttggct
tatattaccttcttgaagaaaattggctactccgatctggaaattaaagggaatatgaat
agaagttcttcatcttcgggtagtaacagtagtaaagaaaaattaacaaaacgatcgaga
gctagctcaaagttgaaaaaaccttctacctcgtcaactacagctaaaacaacaacaaca
acagcagcaacaacagctacgaagactgccacgtcttcaaaactgttgaaaccaagaact
acaacaacgacggtgaagaaaaaaaaggataagttgatatcgtcaagtcccgagaaagtg
aagaagccacatattcatattgctactccaaagatgagtgaaaattcaaattcaacgaaa
actgaatcagaacagaagaaagatgctaccccagatgatcgtgcaaataatattaatacc
aatgatgctctaagttcttctcaaccaaagcttgactcgaaaaagaagatctccttctct
aaatatttaaaaagtgatattgccgtagaggaaacaagcaagaaaagaccgcttcctgat
gatgagcccagtgactcatcatcatcttctttttcttcatcaaattccacctccattcaa
cttaagaaaccacgaagcacatctgatgtcaaagtaggtaaatctattttgaagaaaaga
acgacgatgccaacggcaggtaagactccaacaaattcaatcaaattcatttcagatcct
aaattgattactgtgtacggtgatgacttgccaaatcatggtttaatcgtttctcccatt
gagttgaagaagatattaaaaccatttaaagagggcgaaccaaatgaggtcctacatttg
gaaaactttacatcaaaacctatcccattacaaccatcactagacctaacctcatctcca
gatttatattccgatattgtcgatattaaagggggtcctattaattgtgatactaatacc
ccaatgcattatagaactagtttcacgaattttagtagcagtttgaaacaacaacaacct
agagatccaataatagtagatgaagaggatatcatcgaaaagagcaaaaatacaatgggg
agaaaattgtatagaaatcctataattgcaagagcatttggggaaaataaactactgtta
aggaaggatagaggtggattaccatataataataagccacccatagtggttagaaataat
tacccaataaaatcctcaaggtag
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