Naumovozyma castellii: NCAS_0B03980
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Entry
NCAS_0B03980 CDS
T02233
Symbol
NCAS0B03980
Name
(RefSeq) mismatch repair ATPase MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ncs
Naumovozyma castellii
Pathway
ncs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCAS_0B03980 (NCAS0B03980)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0B03980 (NCAS0B03980)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NCAS_0B03980 (NCAS0B03980)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Med29
AAA_27
GP57
TAP35_44
Motif
Other DBs
NCBI-GeneID:
96902041
NCBI-ProteinID:
XP_003674855
UniProt:
G0V9Z7
LinkDB
All DBs
Position
2:712826..716380
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AA seq
1184 aa
AA seq
DB search
MTPLTPKTSKVLNIKGSQNSSQKKKKQSSLLSFFSKKDPSTATPIKKKPPTPKVEPTPTL
EIPSSVKSEGQVPSSESALDQTLDTSFDDESLSNIVKKERSNKRSVNYAEDSDEDDDNIA
LSSTQRKRTKIVAQDDDDDDDEDFIPGKTVNNHDESDIDAFIDDEDDDDIMDLVEKKPII
KKSPTPMRKLPVPKPKRTSQPATQPKAQKFNKQNEERYHWLVNEKDAQGRAPTDPEYDPR
TLHIPSSAWGKFTAFEKQYWEIKSKMWDCVVFFKKGKFYELYEKDAFLANSLFDWKLAGG
GRANMQLAGVPEMSFEYWASQFIQYGYKVAKVDQKESMLAKEMREGSKGIVKRELECVLT
SGTLTDGDMLHSDLATFCLAVREEPRDFYIDEQTTFTTDSTGPSSIGKKLFGIAFIDTST
GELQLLEFEDDSECTKLDTIMSQVKPKEIIMEKNNLSSLANKIVKFNAAPNAIFNNIKPD
QEFYNFEKTYDELITGNYFEDESKWPETLKNYYKEGKKIGFSTFGGLLYYLKWLKLDQNL
ISLGNIKEYNPIESQNSLILDGVTLQNLEIFSNSFDGTDKGTLFKLFNRAITPMGKRMMK
KWLMHPLLHKKDIEKRLDSIETLMNNVELRDTIESTFTKLPDVERMLARIHSGTLKVKDF
DRVIQAFEDIVTLQNSIKDFDLKGALSVYFSQIPKSLIDDVENWTNAFDRIKAVEENIII
PHRGIEPEFDKSLDDIQELEDQLQDQLNLYKKRFKNSNIQYKDSGKEIYTIEVPVSITKQ
IPSDWTQMAANKSTKRYYSEEVRVLARSMAEARELHKALENELKIRLCKKFDAHYNTTWM
PTVHVISNIDCLLALTRTSESLGYPACRPVLRDEVNLETGTKLNGYLKFTSLRHPCFNLG
SSSTKDFIPNDVELGKDSPQLGLLTGANAAGKSTVLRMTCIAVIMAQMGCYVPCESAELT
SFDRIMTRLGANDNIMQGKSTFFVELSETKKILDLATNRSLLVLDELGRGGSSNDGFAIA
ESVLHHVATHIQSLGFFATHYASLGLSFKGHPQVKPMKMSILVDDETRNVTFLYKLVPGQ
SEGSFGMHVASMCGIPSEIVDNAQVAADTLEHTSRLMKERKMLNGGLNEDIITVPMGLQS
DFVRLVYGDGLRNTSKGAGEGVLNYDWNVKRNALKSILTFAENL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgactcctctgacacctaagacctcaaaggtcttaaacataaaaggttcgcaaaactca
tcccaaaagaagaagaagcaatcatctcttctatcattcttttccaagaaggatccctcc
acagcaactccaattaagaaaaagccaccaactccaaaggtggaacccacgcccaccctg
gaaattccatcaagtgttaagagtgaaggccaagttccatcttcagaaagtgcattggat
cagacattggacacatcttttgacgatgaatccttatcaaatatagtgaagaaggaaaga
tctaataagagatctgtcaattacgcagaagatagtgatgaggatgacgataatattgcc
ttatcctctactcagagaaagagaactaagatagttgctcaagatgacgatgatgacgat
gatgaagatttcattcctggcaagactgtaaataaccatgatgaatccgatattgatgca
ttcattgacgatgaggatgacgatgatattatggacctagtggagaagaaaccaataatt
aagaaatctccaacacccatgagaaaattgcccgtaccaaagccaaagaggacatcgcaa
ccggcaactcaaccaaaagcacagaaatttaataaacagaatgaagaaaggtatcattgg
ctggtaaatgagaaagatgcacagggtagagcacccactgatccagaatatgatccaaga
accttacatattccaagttctgcgtggggaaaatttacagcttttgaaaaacaatattgg
gaaattaaatccaagatgtgggattgtgttgtcttctttaaaaaaggtaaattctatgag
ttgtatgaaaaggatgcattcttagctaactcgttgtttgattggaaattggcaggcggt
ggtagagctaacatgcagttagcaggtgttcctgaaatgtcctttgaatattgggcttca
caattcattcaatacggttataaagttgctaaagtggatcaaaaggaatccatgttagcc
aaggaaatgagagaaggttccaaaggtatcgttaaaagagaattggaatgtgtccttact
tcaggtactcttactgatggggatatgttacattccgacctagccacattttgcttagcc
gtaagagaagaacctagagatttttatattgacgaacaaacaacattcacaactgattcg
acaggtccaagttcaataggtaagaaactatttggtattgcattcattgatacttctact
ggtgagttacaacttttagaattcgaagacgatagtgaatgtaccaaattagatactatt
atgtctcaagttaaaccaaaggaaattataatggaaaagaataacttatccagtttagca
aataagattgtgaaatttaatgcagctccaaatgctatattcaataatattaaaccagat
caggaattttataattttgaaaagacctatgatgaactaatcactgggaattattttgaa
gatgaatctaaatggcctgagacattgaaaaactattataaagaaggtaagaaaatcgga
ttttcgacatttggagggttgctttattatttgaaatggttaaaactagatcaaaatttg
atttcattaggtaacatcaaggaatataacccaatagaatcccaaaactcgctaatattg
gatggtgttactttgcaaaatttggaaatattttccaactcatttgatggaactgataaa
ggaactttattcaaactatttaacagggcaataacaccaatggggaagagaatgatgaag
aaatggctaatgcatcccttacttcataagaaggatattgagaagagattggatagcata
gagacactaatgaacaacgttgaattaagagacacaatagaatctacctttactaaactt
cctgatgtggaaagaatgctagcacgtattcattctggtactttaaaagtcaaagatttt
gatagagtcattcaagcatttgaggatattgtaactttacaaaattctataaaggatttt
gatttaaagggtgcactctcagtatactttagtcaaattccaaaaagtctaattgacgac
gtcgaaaactggaccaatgcattcgaccgtataaaagcggtggaagaaaatataattatt
ccccatagaggtatagaaccagaatttgataaatcattagatgatattcaagagttagaa
gatcaactacaagaccaattaaatttgtataaaaaaagattcaaaaattcaaacattcaa
tataaggattctggtaaagagatatatacaattgaggtaccggtgtccattacaaagcag
attccatctgattggacacaaatggcagctaataaatcaaccaaacgatattactctgaa
gaagttagagtacttgctaggtccatggcggaggcaagagagctccataaggcattagaa
aatgaattgaagattcgattatgtaagaaattcgacgcccattataatacaacatggatg
ccaaccgtccatgttatttcaaatattgattgtttgttagcattgaccagaacatcagag
tcattgggctatcctgcatgtaggccagtattacgagatgaggtcaatcttgaaacagga
acgaaattaaacggatacttgaaatttacctctctaagacatccatgcttcaatttagga
agttcttcaacaaaagatttcattcccaatgatgttgagctagggaaggattcaccacaa
ctgggtttattgacaggtgctaatgctgcaggtaagtccactgttcttagaatgacatgt
attgccgtaattatggcacaaatggggtgttatgttccatgtgaatcggcagaattgact
tcatttgatagaataatgactcgtctaggtgcaaatgataacattatgcaaggtaagtct
acattctttgtcgaattgtctgaaaccaagaaaattttagacttagcaacgaataggtcg
ttgttagtgttggatgagttaggaagaggtggttcgtcaaatgacggttttgccattgct
gagagtgtattacatcatgtcgccacacatatacaaagtttaggcttttttgctactcat
tatgcttccctaggactaagtttcaaggggcatcctcaagtaaaacctatgaaaatgagc
atcttagtggatgatgaaacgcgtaatgttaccttcttgtacaaattggtccctggtcaa
agtgaaggttcgtttggtatgcatgttgcatcaatgtgtggtatcccatcagaaattgtt
gataatgcacaggtagccgcagacactttagaacatacttctcgattgatgaaggaacgt
aaaatgttaaatggaggccttaatgaggatattattacagttccgatgggtttacaaagt
gattttgtacgtttggtttacggtgatggccttagaaatacaagtaagggagccggtgaa
ggtgtactaaattacgactggaacgttaaacgtaatgcccttaagagcatactcacattt
gcagagaacctctga
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