KEGG   Naumovozyma castellii: NCAS_0B07110
Entry
NCAS_0B07110      CDS       T02233                                 
Symbol
NCAS0B07110
Name
(RefSeq) Sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ncs  Naumovozyma castellii
Pathway
ncs03018  RNA degradation
ncs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCAS_0B07110 (NCAS0B07110)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCAS_0B07110 (NCAS0B07110)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncs03019]
    NCAS_0B07110 (NCAS0B07110)
   03041 Spliceosome [BR:ncs03041]
    NCAS_0B07110 (NCAS0B07110)
Messenger RNA biogenesis [BR:ncs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NCAS_0B07110 (NCAS0B07110)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     NCAS_0B07110 (NCAS0B07110)
Spliceosome [BR:ncs03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    NCAS_0B07110 (NCAS0B07110)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 96902352
NCBI-ProteinID: XP_003675166
UniProt: G0VA65
LinkDB
Position
2:1351925..1352152
AA seq 75 aa
MGGKLVSGTLKGYDQLMNLVLDDTIEYLKDADADIATSTVKDKTRELGFTVIRGPMLISL
SPLDGSEVIYIQNSE
NT seq 228 nt   +upstreamnt  +downstreamnt
atgggcgggaaattggtttcgggtacactaaagggttatgaccaattgatgaatttagtc
cttgatgatacgattgagtatttgaaagatgcagatgctgatattgcaacatcaactgtc
aaggataagacgagagaattaggatttacagttattagaggtccaatgttgatctctttg
agtccattagatggctccgaagtcatctatattcaaaattcagagtaa

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