KEGG   Naumovozyma castellii: NCAS_0B07980
Entry
NCAS_0B07980      CDS       T02233                                 
Symbol
NCAS0B07980
Name
(RefSeq) uncharacterized protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ncs  Naumovozyma castellii
Pathway
ncs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ncs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCAS_0B07980 (NCAS0B07980)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncs03019]
    NCAS_0B07980 (NCAS0B07980)
Messenger RNA biogenesis [BR:ncs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NCAS_0B07980 (NCAS0B07980)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     NCAS_0B07980 (NCAS0B07980)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 96902439
NCBI-ProteinID: XP_003675253
UniProt: G0VAF2
LinkDB
Position
2:complement(1513166..1513693)
AA seq 175 aa
MSSPAPKVPQQQQHAKPQGKQGSKASKKLSEGEADLYLDQYNFTTTAAIVSSVDRKIFVL
LRDGKLLFGILRTFDQYANLILQHCVERIYLTEENKYAENELGIFMIRGENVVMLGEVDI
DKEDKPLESMERIPFKDASRIKKLNDEKKFKTETKKGKEYARYGLIHDFHKSDMY
NT seq 528 nt   +upstreamnt  +downstreamnt
atgtcgtcgcctgctccaaaagtgccacaacaacaacaacatgccaagccgcaggggaag
caaggcagtaaggcctccaagaaactgtccgagggtgaggcggacctatatctagaccaa
tacaacttcaccaccaccgctgccatagtgagttccgtggaccgtaagatctttgtgtta
ttgcgtgatgggaagttattgtttggtatcctgagaacgttcgaccagtatgccaatttg
atcctgcaacattgcgtcgagagaatatatttgactgaagagaacaagtacgccgagaat
gagctggggatattcatgatccgtggtgagaacgtcgtcatgttgggggaagtggatata
gataaggaggataagcctctggaatcgatggaacgcataccctttaaggacgcttctaga
attaagaagttgaatgacgagaagaagttcaagacggagactaagaagggcaaggagtac
gctcgttacgggctcattcacgacttccacaagtctgatatgtattaa

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