Naumovozyma castellii: NCAS_0B08160
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Entry
NCAS_0B08160 CDS
T02233
Symbol
NCAS0B08160
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
ncs
Naumovozyma castellii
Pathway
ncs03020
RNA polymerase
ncs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCAS_0B08160 (NCAS0B08160)
09124 Replication and repair
03420 Nucleotide excision repair
NCAS_0B08160 (NCAS0B08160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0B08160 (NCAS0B08160)
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0B08160 (NCAS0B08160)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
NCAS_0B08160 (NCAS0B08160)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NCAS_0B08160 (NCAS0B08160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Spo16_C
LRIF1
Motif
Other DBs
NCBI-GeneID:
96902457
NCBI-ProteinID:
XP_003675271
UniProt:
G0VAH0
LinkDB
All DBs
Position
2:complement(1555569..1556309)
Genome browser
AA seq
246 aa
AA seq
DB search
MNISTSTFQTSRRRLKKIEEEENAATLQLGHEFQLKQINHQGEEEELIALNLSEARLIIK
EALVERRKAFKKSQRIQQKKRKQRQNESNNIHNNSTKGSGDSDSDDAGAINHINQTDSSH
MVDEAQSDEDDDEEDEDFMHTETREKELESLDVLLEQTTGGNNKDLKNTLEYLTNFSRFR
DQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLVPSLNNKISDDELERILKELS
NLETLY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttcgacatctacgttccagacttctagaaggagattgaagaagattgaagag
gaagagaatgctgcaacattacaattgggacatgaattccaattgaaacaaatcaaccat
caaggagaagaggaagaactgatcgcattgaacttgagtgaggcaagattaattatcaaa
gaagccttagtggaaagaagaaaggcgtttaagaaatctcagcgtatacaacaaaaaaag
aggaaacagcgtcagaatgaaagtaataatatacacaataactccaccaagggatcaggc
gatagcgacagtgacgatgcaggtgccattaaccatattaaccaaactgacagttcacac
atggtggatgaggcacaaagtgacgaggatgacgatgaagaagatgaagatttcatgcac
acagagacccgtgaaaaggaactagaatcattagatgtcctgttggaacaaactacaggt
gggaacaataaggatttaaagaatactttggaatatttgaccaatttctcaagatttaga
gatcaagaaactgttggtgcagtaattcaattgttgaaaagtacaggattacacccattt
gaagtggctcaattgggatccctggcgtgtgatacagcagatgaagcaaagactcttgtt
ccaagtcttaataacaaaatatctgacgatgaattggaaagaattctaaaggaactgtca
aacttggaaacgttgtattga
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