Naumovozyma castellii: NCAS_0C00930
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Entry
NCAS_0C00930 CDS
T02233
Symbol
NCAS0C00930
Name
(RefSeq) SWI/SNF catalytic subunit SNF2
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
ncs
Naumovozyma castellii
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0C00930 (NCAS0C00930)
03036 Chromosome and associated proteins [BR:
ncs03036
]
NCAS_0C00930 (NCAS0C00930)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
NCAS_0C00930 (NCAS0C00930)
RSC complex
NCAS_0C00930 (NCAS0C00930)
Chromosome and associated proteins [BR:
ncs03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
NCAS_0C00930 (NCAS0C00930)
SWI/SNF complex
NCAS_0C00930 (NCAS0C00930)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
QLQ
ResIII
HDA2-3
DEAD
HSA
DUF4741
Motif
Other DBs
NCBI-GeneID:
96902667
NCBI-ProteinID:
XP_003675450
UniProt:
G0VC74
LinkDB
All DBs
Position
3:168473..173584
Genome browser
AA seq
1703 aa
AA seq
DB search
MEVEIPDRIFTKEEVNRCYLKWQQLRNLHGENAPKIPEFIMCTRILQKAAKQQQDAKLQQ
QNAVQNNTQFDQSNDPRESVSIAGSPKAGNLPPIQPVNSRKQSEVSKVPPNQGNNQAPQL
VDGMQNQLSPGQQYQNALDQHHGGEQEFQAQPRAQLLPENEKAQMEAELQQSGSGQQDGP
FYNQHMPQQSPPSIQPNYKPTLSNTEKEPNGLSNNYNNSNPSQRGTPMSAGSPQQRPHPA
SIFTHEQSTLLKAQITALKCLVNQQQVPRECQVVIQQSIERPPDFKRMLMSLSEFVKRQH
FERQNGQKHEGPNVAGATQHVGNNPNATNTQQSIINDKKPSPTEEQGENPNPSIIKQELS
QTIENQQNTQTTTNEATDLSLPDRVDTTKMEQQKEKILDLGKSATPKENIPPGLIDKRRS
RTLSNQDDLSPKSITSEEIRDARKSSVKENELPQSPPFEGEKEPPQQAAPILLEEFKLLH
KEIKEVVNVTDPSMIVDAFSLPNMETKVDYEKLFPTSETSKQEIYPGLLPTGLDVHSATE
LYHTLTALNIGTTIDAFLNDIVSDKTDEETRCNSLYDYYALQLLPLQKAVRGHVLQFEWY
QNSLLPNTHPNFLSKVRNINMLDTIFTRELYRRHELVQYQKLMVHEERKLRSITHSSVVQ
FNLKNERRNRHVKTGNKFFNIHATIEKDEQRRVERKAKERLQALKANDEEAYIKLLDQTK
DTRITHLLKQTNAFLDSLTRAVKDQQKYTKEMIDSHLLEASEEDKSVSPSMPVATFPDEE
DGEEKGNFDYYSVAHRIKEEIRQQPAMLVGGTLKEYQLKGLQWMVSLFNNHLNGILADEM
GLGKTIQTISLLTYLYETKHIHGPYLVIVPLSTLSNWSNEFAKWAPTMRCISYKGSPNER
KSKHAIIKSGEFDVVLTTFEYIIKERALLSKVKWIHMIIDEGHRMKNAQSKLSLTLNTYY
HSDYRLILTGTPLQNNLPELWALLNFALPKIFNSVKSFDEWFNTPFANTGGQDKIELSEE
ETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVIKCKMSALQQIMYQQMLKYRRLFI
GDHTNKKMVGLRGFNNQLMQLKKICNHPFVFEEVEDQINPTRETNANIWRVAGKFELLEK
VLPKLKATGHRVLIFFQMTQIMDIVEDFLRFIDIKYLRLDGHTKSDDRSNLLKLFNAPDS
EYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITE
HSVEEAILERAHKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLEAEEERKQRRVKGLPD
EEEMGDNELNELLARNDGELEIFHDLDVERLKRDSERGLKSRLLANDELPEVYHQDIEKE
LEKEQSEAAAVYSGRGARERKATTYSENVTEDQWLQQFEVSDHEDNDNNGNNSMDEGSLD
ANGNPRKRKTARSRGKSKRAKLSGESDAPENTIPESPMTVENTPNEELHSSPDLVSSPVE
IPLSTGAPTTAGKTSIKSARTSTKGRSKIRAKGRSRAKGRSRQVKPKNGLEYVRTAQAAV
EPLQVRENVSKTAQILYDFAVNYENSDGRPLSGIFMTKPSKTLYPDYYLLIKYPVAYENI
QRHIDDKAYNKLFEVLEDFHLVFANARIYNTEDSLVYQDAIELEGVIIEKYKELSKDINP
IDFSLFDELYATQPLVLNNISET
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaaataccagaccgcatcttcacgaaagaagaagttaaccgctgttattta
aaatggcaacaattgcgaaatctacatggtgaaaatgcacccaagataccagaatttatt
atgtgtaccagaatattacaaaaggcagcaaaacaacaacaggatgccaagctgcagcag
caaaatgcagtccaaaacaatacacaattcgatcaaagtaatgacccacgagaaagtgtt
tcaatagctggatcaccgaaagcaggaaatttacctccaatacaacccgtgaactccaga
aagcaaagtgaagtgagtaaggtgccgcctaatcaagggaacaatcaagcgccgcagcta
gtggatggtatgcaaaatcaattatcacctggacagcagtatcagaatgctctagaccaa
catcatggaggtgaacaggagttccaagctcaacctcgcgcacaattgctgcctgagaat
gagaaggctcaaatggaagctgaacttcaacaatctggttcaggacagcaggatggacct
ttttataaccagcacatgcctcaacaatcgccaccatcgattcaaccgaattacaagcca
accctttccaacacggaaaaggaacccaatggtttatcaaacaattataacaatagcaac
cctagccaacgaggaacgccaatgtcagcgggatctcctcagcaacgacctcatcctgca
agtatatttactcatgaacagtcaactttattgaaagcacaaattactgccttgaagtgt
cttgtaaaccaacaacaggttcctagagaatgtcaagttgtcattcaacagtctatagaa
agaccacctgatttcaagcgaatgttaatgtctttaagtgaatttgtgaaaagacaacat
tttgaaagacaaaatggtcaaaaacatgaaggaccaaatgttgctggagccacacaacac
gttggcaacaatccaaatgcgacaaatacacaacaatccataattaatgacaagaaaccc
tcaccaaccgaagaacaaggcgagaatccaaatccaagcattattaaacaagagctttct
caaaccatagaaaatcaacagaatacccaaactactacaaatgaagcaacagacctatca
cttcctgatcgtgtcgatacaacgaaaatggaacagcagaaagagaagattttggattta
ggtaaatctgcaactccaaaggaaaatataccacctggtctaatcgacaaaagacgatcg
agaacactttcaaatcaggacgacctctctccaaaatcaattacctcagaagaaatacgt
gatgcaaggaaatcttctgtgaaagaaaatgaactaccgcaatcacctcctttcgaaggt
gaaaaagaacctccccagcaagctgccccaatattactggaagaatttaaactattgcat
aaagagatcaaagaagtcgttaatgttaccgatccaagcatgattgttgacgccttttct
ttacctaatatggaaaccaaagtagattacgagaaattatttccaacgtctgaaactagc
aaacaggagatatacccaggtttgttaccaaccggattagatgttcattcagcaactgaa
ctataccatacattaacggcattgaatataggcactaccatagacgcttttctcaatgat
atagtaagtgataagactgatgaggaaacacgttgcaattctctttatgactactatgcc
ctccaattactacctttacagaaggcagtcagaggacatgttttgcagtttgaatggtat
caaaattccttattgcctaatactcatccaaatttcttgtccaaagtgagaaatattaat
atgctcgataccatctttacaagagaattatacaggagacacgagttggtacaatatcag
aaactaatggttcacgaagagaggaaattgagaagcataacccattcttctgtagttcag
ttcaatctgaaaaatgaaagaagaaatagacatgtaaagaccggtaataaattctttaac
attcatgccaccatagagaaagatgaacaaagaagggtagaaagaaaagctaaggaacgt
ttacaggcattgaaagcaaatgatgaggaagcatatattaaactattggatcaaacaaaa
gatacaagaatcacacatttattgaagcaaacaaatgcctttttggattctctaacgagg
gcagttaaggaccaacaaaaatatactaaagagatgatcgattctcacttacttgaagcc
tctgaggaggataaatccgtttccccttcaatgccagtggctacatttcctgatgaggaa
gatggggaagagaagggaaattttgattactacagtgttgcacatagaattaaggaagag
ataaggcaacaacccgctatgttagttggcggaaccttaaaagaatatcaattgaaaggt
cttcaatggatggtttcattattcaataaccatttaaatggtattttggctgatgagatg
ggtttaggtaagacaattcagacaatttcgttattgacatacctttacgaaacgaaacat
attcatggaccttatcttgttattgtacccttatcaacattatcgaattggagtaacgaa
tttgctaaatgggcacctacaatgagatgtatctcttataaaggttctcctaatgaaaga
aaatctaagcatgcaattatcaagtcaggagaatttgatgtggtactgacaactttcgag
tacattattaaagagagggcgttattatcaaaggtaaaatggattcacatgattattgat
gaaggtcatagaatgaagaacgcgcaatcaaagttatcactaactttgaatacgtattat
cactctgattacagactaattctaactgggactccactgcagaataatttaccagaatta
tgggcactactaaattttgcgcttccgaagatttttaactctgtaaagtcgttcgacgaa
tggttcaacacaccttttgcgaatactggtggtcaagataagattgaactaagtgaagaa
gaaactttactagttatcagaagacttcataaagtgttaagacctttcttattgcgtcgt
ctcaagaaggatgttgagaaggaacttccagataaagtagaaaaagtgatcaaatgtaag
atgagcgccttacaacaaattatgtaccaacaaatgttgaaatatcgtcgtttgtttatc
ggtgatcatacaaataaaaagatggttggtttaagagggttcaataaccagctaatgcag
ttgaaaaagatttgcaatcatcccttcgtttttgaagaggtagaagatcaaattaatccc
acgcgtgaaaccaatgcaaacatatggcgtgttgctggtaagttcgaattgttagaaaaa
gtacttccaaaattaaaagccactggacatcgtgttttaattttctttcaaatgacccaa
attatggatattgtcgaagattttttgaggttcattgatatcaagtatttgcgattagac
ggtcatacaaagtcagatgatcgttcaaatcttcttaagttgtttaatgcacctgattct
gaatatctctgttttatactgtcaaccagagccggtgggttaggattaaatctacaaact
gctgataccgttattatttttgatacagattggaatccacatcaagatttgcaagctcaa
gatagagctcacagaattggtcaaaagaatgaagttagaattctacgtttaattacagaa
cattcggtggaagaagcaattcttgagagagcccataaaaagttggatattgatggaaag
gttattcaagctggtaaatttgataacaaatcaacttctgaagagcaagaggcgctacta
agatctcttttggaagctgaagaagaacgtaagcaaagaagagtaaaaggacttccagac
gaagaagaaatgggagataacgaactaaatgagttattagcaagaaatgatggagaatta
gaaattttccatgaccttgatgtagagaggctaaaacgtgattcagaaagaggtttaaaa
tcaagattattggcaaatgatgagcttccagaagtttatcaccaggatatagaaaaagaa
ttagaaaaggagcaatctgaagcagcggcggtttatagtggaagaggcgcaagagaacgt
aaggcgaccacatactctgaaaatgttactgaggaccagtggttgcagcaatttgaggtc
agtgatcatgaagataatgacaataatggtaacaattccatggatgaagggtcattagat
gcaaatgggaatcctaggaagcgtaaaactgcaagatctcgcggaaaatctaagagagct
aaactgtctggtgaatctgatgctcccgaaaatactattcctgaaagccctatgacagtt
gagaacacacctaatgaagaattacattcatctccagacctcgtttcatctcctgtggag
attccattaagtactggggcaccaacgactgcaggaaagacttcaatcaaatcagcaaga
acatccacaaagggacgtagcaaaatacgtgccaaaggacgcagtcgcgcgaaaggccgt
tcacgtcaagttaaacctaaaaatggccttgaatatgttcggactgcacaggctgccgtt
gaaccattacaagttcgtgagaatgtctcaaaaactgctcagatcttatacgattttgct
gtgaattatgaaaatagtgatggaagaccgttatctggaatttttatgaccaaaccttcg
aaaactttgtaccctgattattacttactgatcaagtatccagtggcctatgaaaatatt
caaaggcatattgatgataaggcgtataataaactattcgaagtattggaggattttcac
ttagtctttgcaaatgcaagaatatacaatactgaggattcattggtttatcaggatgct
attgaattggaaggtgtgattattgaaaaatataaagaactttcgaaggatatcaatcct
attgatttttcgttatttgatgagctttacgcaactcagccgctggtcttaaataatatt
tcagaaacttaa
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integrated database retrieval system
