Naumovozyma castellii: NCAS_0C01720
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Entry
NCAS_0C01720 CDS
T02233
Symbol
NCAS0C01720
Name
(RefSeq) uncharacterized protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ncs
Naumovozyma castellii
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0C01720 (NCAS0C01720)
03041 Spliceosome [BR:
ncs03041
]
NCAS_0C01720 (NCAS0C01720)
03036 Chromosome and associated proteins [BR:
ncs03036
]
NCAS_0C01720 (NCAS0C01720)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCAS_0C01720 (NCAS0C01720)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
NCAS_0C01720 (NCAS0C01720)
mRNA cycle factors
Common to processing body (P body) and stress granule
NCAS_0C01720 (NCAS0C01720)
Spliceosome [BR:
ncs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NCAS_0C01720 (NCAS0C01720)
Chromosome and associated proteins [BR:
ncs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
NCAS_0C01720 (NCAS0C01720)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
DUF5444
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
96902745
NCBI-ProteinID:
XP_003675528
UniProt:
G0VCF2
LinkDB
All DBs
Position
3:complement(317951..319873)
Genome browser
AA seq
640 aa
AA seq
DB search
MTDLSNQYQDFNSGTADSDNKHHGYVPPHMRGGTNGGSRGGGGQRSFGDNSGNQRSFGDG
NQRRGGSFFGGGGSRQGGSFFRNNSSRGGGSGGYSRGGGSYGRGGGFGGGSGSRWVDGKH
VPGPRNERIELELFGEADDPHVLSSGINFDNYDDIPVEATGNNVPEPITEFSAPQLDELL
LENIKLARFTKPTPVQKYSVPIVENGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSKTP
EQGRNFYSKKGYPTALILAPTRELATQIFDEAKKFTYRSWVRPCVVYGGAPIGNQMREVD
HGCDLLVATPGRLTDLIDRGKISLANIRYLVLDEADRMLDMGFEPQIRQIVEGSDMPQVG
DRQTLMFSATFPVDIQQLARDFLNDYIFLSVGRVGSTSENITQVILYVEDQDKYSALLDL
LAATTDGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQQERERALSAFRAGTATIL
VATAVAARGLDIPNVTHVINFDLPGDIDDYVHRIGRTGRAGNTGVATSFFNRGNQNVVRG
LIDILSEANQEIPSFLNDIANEGGRSRGGRGGGYGGNRSHSNRDFRKHGNGSFGSSRGGG
SNSSWGSSSGGGYRGGNNDGWNNSFGSGSSYKSSGNASWW
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttaagcaatcaatatcaggattttaattccggtactgcagattccgacaat
aagcatcacggttacgttcctcctcatatgagaggtggtactaatggcggttcaagaggt
ggtggtggtcagagatcatttggtgacaactctggcaatcaaagatcatttggtgatgga
aaccaaaggagaggcggcagcttcttcggtggtggcggatcacgtcaaggcggtagtttt
tttagaaataatagcagtcgcggcggcggcagcggcggatactcaagaggtgggggcagc
tatggaagaggtggtggatttggtggaggtagtggaagtagatgggtggacgggaaacat
gtgcctggtccaagaaacgaaagaatcgaattagaactattcggtgaagctgatgatcca
catgtcttgtcttcgggtatcaattttgataattatgacgatatccctgttgaagctacc
ggtaataatgtcccagaaccaattactgaattcagtgctccacaattagatgagttgttg
ttagaaaatattaaattagcaagatttactaagcctacaccagtgcaaaagtactcggtc
cctatcgtggaaaatggtagagatttaatggcctgtgcacaaaccggttctggtaagaca
ggtgggttcttatttcctgttctttcagaatcattcaagactggtccaagcaaaacgcct
gaacaaggccgtaatttctactcgaagaagggttatccaaccgctttgatcctagcacca
acaagagaactggctactcagatttttgatgaggcaaagaaatttacttatagatcttgg
gttagaccatgtgttgtgtacggtggtgctcccattggtaatcaaatgagagaggttgat
catggttgtgatttattagtcgcaacacctggtcgtttaactgatttgatcgataggggt
aagatctcgttagcaaacatcaggtatttagttttagatgaagctgatagaatgttggat
atggggtttgaacctcaaatcaggcaaattgtggaaggtagtgacatgccgcaagttggt
gatagacaaacacttatgttttccgcaacgttcccagttgatatacaacaattggctcgt
gatttcttaaatgattatattttcttatcagtcggtagagtcggctccacctctgagaat
attacacaagtaatcttatatgtggaagaccaagataaatactcagccttattagattta
ttggctgctacaacagatgggttgacattaatatttgtggaaaccaagagaatggcagat
caattgactgatttcttaattatgcaaaattttaaggcaacagcaatccatggggatcgt
acacaacaagaacgtgagcgtgcactttctgcatttagagctggtacagctactatatta
gtcgccaccgcagtcgctgcaagaggtttagatatccctaatgtgacacatgttattaat
tttgatttgccaggtgacattgatgactacgtgcatagaattggtagaactggtcgtgct
gggaacaccggtgttgccacttctttctttaatagaggaaaccaaaatgttgtcagaggt
ttgatcgatattttaagtgaagctaatcaagaaatcccatcctttttgaatgatatcgcc
aatgaaggtggtagaagtagaggaggtagaggtggtgggtacggtggtaatcgttctcac
agtaatagagatttccgtaagcatggtaatggctcgttcggtagctccagaggtggtgga
agtaattcatcatggggctcttccagtggtggcggttatagaggaggtaataatgacggc
tggaataatagctttggcagcggttctagttataaatcatcaggtaacgcatcctggtgg
taa
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