Naumovozyma castellii: NCAS_0C02540
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Entry
NCAS_0C02540 CDS
T02233
Symbol
NCAS0C02540
Name
(RefSeq) ssDNA endodeoxyribonuclease RAD1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03420
Nucleotide excision repair
ncs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCAS_0C02540 (NCAS0C02540)
03460 Fanconi anemia pathway
NCAS_0C02540 (NCAS0C02540)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncs03032
]
NCAS_0C02540 (NCAS0C02540)
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0C02540 (NCAS0C02540)
DNA replication proteins [BR:
ncs03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
NCAS_0C02540 (NCAS0C02540)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
NCAS_0C02540 (NCAS0C02540)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
96902827
NCBI-ProteinID:
XP_003675610
UniProt:
G0VCN4
LinkDB
All DBs
Position
3:473922..477203
Genome browser
AA seq
1093 aa
AA seq
DB search
MSQLFVQEDSEDEELQLELSRQVEADEERIKDLQQKNTSSNDEIQRKQEEEEEAPLYPLI
PNIPEDGQDFKPNLDDIRAVSIQLNLPLLFQQQVVESALITDDPLVIMGKGLGMASIVAN
LLQILATPTKLNDQLKRSLVLVLNARPRDNQRIQEELQELSWLSMENEGDDNGDATNEEY
IIDEESPYNRPFSVISADSLSVENRRKLYLSGGIICVTSRILIVDLLSGILHPSRVTGMV
VLNVEDLRNHSNVSFILEIYRSKNKWGFIKAFSESPESFTLEFSPLLSKMRDLRLRNVLL
WPRFRVEVSACLNKLPNTVSNSVIEVKVSLTNSMSQIQFGLMECLKKCIAELNRKNPELF
LEWWNIDNALDINFLKSIDSVMIPNWHRISYESKQLTKDIRYLKNLLKLLINADAVDFYE
EIQLSLEANKPSISRKYSESPWLMANESQLVISYAKKRIINDGDYFLEEMPKWEQLISIL
DDIAHERLTKDSQGTTLIACSDSATCAQLTRVLACSDRKNGLRRIMLRKLQHYKALRDQR
RKIIKEVRSKGPAVSNPNELNVSAAFAKEEIITKRRRTRGAAAVAAVERLRTAGTGDDIE
SKIDSYDIKEELTHIGDDDSLKSDSILNKFVDDDIGVPDIEADLPEDDDDDSAAEELYLK
TAHTGVTKELWEARVKNFEYISRNEQIIVEKFSNLNDDSTFEEIMPSYIIMFEPDLSVIR
RVEVYRAIHRELAPKVYFMYYGESVEEQSHLTAIKKEKDAFTKLIREHANLAQHFETTED
LSHFKNLAERKSKLNKLKRSGTRNAGGQAGLQEVTQDIIVVDTREFNAPLPGLLFRYGVR
VLPCMLTVGDYIITPDICIERKSISDLIGSLQNNRLVSQCKKMLRYYKYPTLLIEFDEGQ
SFSLEPFSEKRHFKNKESSTTHPISNKLTQEEIQNKLSKLVMKFPTLKIIWSSSPLQTVN
ILLELKLGREQPDPSVAIQYGTGSKKTQTSKKKISNETNNNKFAKILDIPGISKIDYFNI
RKRFRNFEKLQKLPLQEINNVLDDETLSTKLYSFFQAELMEREKDGATDSAEEVDPVDAD
GLEDEDLDLDELL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaattatttgttcaagaggattcggaagatgaagagttacaattagaactttca
aggcaagtggaggcggatgaagagaggataaaagatttacaacaaaagaatacttcttct
aatgatgaaattcaacgaaaacaagaagaggaagaagaagctccgttataccctttaata
ccaaacattcctgaggacggtcaagattttaaaccaaatctggatgacattagagcggtc
agtattcaactaaacttaccgctactattccaacaacaagtggtagaaagtgctctaatt
accgatgatccgcttgtaattatgggtaaagggttaggaatggccagtattgtggcaaat
ttgctacaaattctggcgacaccgacaaaactgaatgatcagttgaagagatctttggta
ttagtacttaatgcaagaccccgtgataatcaacgtatacaggaagagttacaggaactt
tcttggctttctatggaaaatgaaggcgatgacaatggggatgctacaaatgaagaatat
ataatcgacgaagagtcaccctacaatagaccgtttagtgtaatctctgcggactctcta
agtgttgaaaacaggagaaaattgtatctatcaggtgggataatatgtgttacatcaaga
atcttgattgttgatttattatcgggaattctacaccctagtcgagttactggtatggtt
gtattaaatgtagaggacctaagaaatcattcgaatgtatcatttattttagagatatat
cgatccaaaaataaatgggggtttatcaaagcattttctgaatctccagaatcattcact
ttggaattttcacccttattaagcaagatgagagatcttcgattaagaaatgtcttactt
tggcctcgttttcgagtagaggtttcagcatgtttaaacaaattaccgaatactgtatct
aattctgtcatcgaagtgaaagtatcattgactaattcgatgtcacaaattcaatttgga
ctaatggaatgtttgaaaaagtgtattgcagaattgaacagaaagaaccctgagttattt
cttgagtggtggaatattgataacgccttggatataaactttcttaaatctattgattct
gtaatgattcctaattggcatcgaatttcatacgaatccaagcaactgacgaaggatata
agatatctaaagaatttgctaaaactcttaatcaacgcggatgctgttgatttctatgaa
gaaattcaactaagtttagaggctaataaaccatctatttctagaaagtacagtgaatcg
ccatggttgatggcaaatgaatctcagttagttatatcgtatgccaagaaacgaataata
aacgatggtgactatttcctagaggaaatgcctaaatgggaacaattaatcagcattttg
gatgatatcgcacatgagagattgaccaaagattcacaagggacgactttaattgcatgt
tccgattcagctacatgtgctcagttgacaagagtattagcctgttctgatagaaagaac
ggacttcgaagaattatgttgagaaagttgcagcattataaagcattaagagatcagaga
agaaaaattataaaggaggtacgatctaaaggacctgcagtatccaatccaaatgagtta
aatgtgagtgcagcttttgccaaggaggaaataataactaaaagaaggagaactcgagga
gcagccgctgtcgcagcagtagaacgattacgtacagcagggacaggcgatgacattgaa
agtaaaattgattcctatgatataaaagaggaactaacccatatcggtgatgatgatagc
ttgaaatctgattctattctgaataaatttgttgatgacgatatcggcgtgcctgatata
gaggctgacctacctgaggatgacgatgatgatagtgctgcagaggaattatatcttaaa
acagcacatactggtgtaacaaaagaactttgggaagcacgggtaaaaaactttgaatac
attagccgtaatgaacaaataattgtagaaaaattcagtaaccttaatgatgattcaact
tttgaagaaataatgccttcatatattattatgtttgaacctgatttatctgttattaga
agagtggaagtttatcgtgctattcatagagaattagcaccaaaagtttactttatgtat
tatggtgaaagtgtagaagaacaaagccacctgactgcaattaaaaaagagaaagacgct
tttactaagctaattagagagcatgctaatcttgcccaacattttgagactacagaggat
ttatcacattttaaaaatttggctgaaagaaaatcaaaattgaataaactgaaaagaagt
gggacacggaatgctggtggtcaagcgggattgcaggaggtaacccaagatatcatcgtg
gtagatacacgtgaattcaatgcaccattaccgggattgctatttagatacggtgttcgt
gtgttaccttgcatgttgacagtcggtgattacattattactcctgacatttgtattgaa
agaaaatccatttcagatttaattggttcattgcaaaacaatcgattagtttcacaatgt
aagaaaatgttacgttactataaatatccaacgttactgatagaatttgatgaaggccaa
tcattctcattggagccatttagtgaaaaaagacattttaaaaataaagaatcctccact
acccatccaatctccaataagttgactcaagaggaaattcaaaacaaactatcaaaattg
gtaatgaaattccctactctaaaaatcatttggtcatcctcacctctgcaaacagttaat
atcctattggaattgaaactcgggagagaacaaccagatccgagtgtggccattcaatat
ggtactggaagtaaaaagacacaaacctccaagaagaaaatttctaatgagacaaataat
aataaatttgctaaaatattagatattccaggaatatccaaaattgattattttaatatt
cgtaagcgatttagaaactttgaaaaattacaaaagttaccgttacaggagatcaacaac
gtcctggatgatgaaacgctgtccactaaactgtatagtttcttccaagcagagttgatg
gaaagagaaaaggatggcgccacggatagtgctgaagaggttgacccagtagatgcagat
ggtcttgaagatgaagatcttgaccttgacgaacttttataa
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integrated database retrieval system
